RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 HPF1Q9NWY4 346 aa17.63■□□□□ 0.41
RPS28-202ENST00000449223 CFAP47Q6ZTR5 3102 aa17.63■□□□□ 0.41
RPS28-202ENST00000449223 IGLV3-32A0A0A0MS00 114 aa17.62■□□□□ 0.41
RPS28-202ENST00000449223 J3KTA2 159 aa17.62■□□□□ 0.41
RPS28-202ENST00000449223 AP3D1O14617 1153 aa17.62■□□□□ 0.41
RPS28-202ENST00000449223 ADAM11O75078 769 aa17.62■□□□□ 0.41
RPS28-202ENST00000449223 DIRAS1O95057 198 aa17.62■□□□□ 0.41
RPS28-202ENST00000449223 UBTFL6P0CB48 400 aaPredicted RBP17.62■□□□□ 0.41
RPS28-202ENST00000449223 PRG2P13727 222 aa17.62■□□□□ 0.41
RPS28-202ENST00000449223 CASP3P42574 277 aa17.62■□□□□ 0.41
RPS28-202ENST00000449223 LIMS1P48059 325 aa17.62■□□□□ 0.41
RPS28-202ENST00000449223 EPS8Q12929 822 aa17.62■□□□□ 0.41
RPS28-202ENST00000449223 ZNF468Q5VIY5 522 aaPredicted RBP17.62■□□□□ 0.41
RPS28-202ENST00000449223 ABHD17BQ5VST6 288 aa17.62■□□□□ 0.41
RPS28-202ENST00000449223 IL20RBQ6UXL0 311 aa17.62■□□□□ 0.41
RPS28-202ENST00000449223 MARCH3Q86UD3 253 aa17.62■□□□□ 0.41
RPS28-202ENST00000449223 SPACA3Q8IXA5 215 aa17.62■□□□□ 0.41
RPS28-202ENST00000449223 BEST3Q8N1M1 668 aa17.62■□□□□ 0.41
RPS28-202ENST00000449223 PIK3C3Q8NEB9 887 aa17.62■□□□□ 0.41
RPS28-202ENST00000449223 OR5M3Q8NGP4 307 aa17.62■□□□□ 0.41
RPS28-202ENST00000449223 NRBF2Q96F24 287 aa17.62■□□□□ 0.41
RPS28-202ENST00000449223 EPYCQ99645 322 aa17.62■□□□□ 0.41
RPS28-202ENST00000449223 ZNF559Q9BR84 538 aa17.62■□□□□ 0.41
RPS28-202ENST00000449223 RNF32Q9H0A6 362 aa17.62■□□□□ 0.41
RPS28-202ENST00000449223 SEMA6AQ9H2E6 1030 aa17.62■□□□□ 0.41
RPS28-202ENST00000449223 WDR70Q9NW82 654 aa17.62■□□□□ 0.41
RPS28-202ENST00000449223 STMN3Q9NZ72 180 aa17.62■□□□□ 0.41
RPS28-202ENST00000449223 CNIH4Q9P003 139 aa17.62■□□□□ 0.41
RPS28-202ENST00000449223 ABI3Q9P2A4 366 aa17.62■□□□□ 0.41
RPS28-202ENST00000449223 CNOT11Q9UKZ1 510 aaKnown RBP17.62■□□□□ 0.41
RPS28-202ENST00000449223 LYVE1Q9Y5Y7 322 aa17.62■□□□□ 0.41
RPS28-202ENST00000449223 A0A1W2PRQ8 180 aa17.62■□□□□ 0.41
RPS28-202ENST00000449223 CEACAM4O75871 244 aa17.62■□□□□ 0.41
RPS28-202ENST00000449223 OR5F1O95221 314 aa17.62■□□□□ 0.41
RPS28-202ENST00000449223 GKN3PP0CG01 181 aa17.62■□□□□ 0.41
RPS28-202ENST00000449223 THRBP10828 461 aa17.62■□□□□ 0.41
RPS28-202ENST00000449223 PTDSS1P48651 473 aaKnown RBP17.62■□□□□ 0.41
RPS28-202ENST00000449223 CYB561P49447 251 aa17.62■□□□□ 0.41
RPS28-202ENST00000449223 SESN3P58005 492 aa17.62■□□□□ 0.41
RPS28-202ENST00000449223 ZNF117Q03924 483 aa17.62■□□□□ 0.41
RPS28-202ENST00000449223 C17orf67Q0P5P2 114 aa17.62■□□□□ 0.41
RPS28-202ENST00000449223 DGCR6Q14129 220 aa17.62■□□□□ 0.41
RPS28-202ENST00000449223 RTL4Q6ZR62 310 aa17.62■□□□□ 0.41
RPS28-202ENST00000449223 EPHX4Q8IUS5 362 aa17.62■□□□□ 0.41
RPS28-202ENST00000449223 SVOPLQ8N434 492 aa17.62■□□□□ 0.41
RPS28-202ENST00000449223 ADAMTS16Q8TE57 1224 aa17.62■□□□□ 0.41
RPS28-202ENST00000449223 NRG4Q8WWG1 115 aa17.62■□□□□ 0.41
RPS28-202ENST00000449223 MCHR1Q99705 422 aa17.62■□□□□ 0.41
RPS28-202ENST00000449223 ANKRD19PQ9H560 264 aa17.62■□□□□ 0.41
RPS28-202ENST00000449223 REEP1Q9H902 201 aa17.62■□□□□ 0.41
RPS28-202ENST00000449223 NMNAT1Q9HAN9 279 aaPredicted RBP17.62■□□□□ 0.41
RPS28-202ENST00000449223 ACER3Q9NUN7 267 aa17.62■□□□□ 0.41
RPS28-202ENST00000449223 VNN3Q9NY84 501 aa17.62■□□□□ 0.41
RPS28-202ENST00000449223 ICAM5Q9UMF0 924 aa17.62■□□□□ 0.41
RPS28-202ENST00000449223 WIF1Q9Y5W5 379 aa17.62■□□□□ 0.41
RPS28-202ENST00000449223 GTPBP1O00178 669 aaKnown RBP17.61■□□□□ 0.41
RPS28-202ENST00000449223 GNGT2O14610 69 aa17.61■□□□□ 0.41
RPS28-202ENST00000449223 FPR1P21462 350 aa17.61■□□□□ 0.41
RPS28-202ENST00000449223 HTR2AP28223 471 aa17.61■□□□□ 0.41
RPS28-202ENST00000449223 RRM2P31350 389 aa17.61■□□□□ 0.41
RPS28-202ENST00000449223 DNAJA1P31689 397 aaKnown RBP17.61■□□□□ 0.41
RPS28-202ENST00000449223 SLC6A8P48029 635 aa17.61■□□□□ 0.41
RPS28-202ENST00000449223 RNF144AP50876 292 aaPredicted RBP17.61■□□□□ 0.41
RPS28-202ENST00000449223 SMIM11AP58511 58 aa17.61■□□□□ 0.41
RPS28-202ENST00000449223 TRIP10Q15642 601 aa17.61■□□□□ 0.41
RPS28-202ENST00000449223 COLEC12Q5KU26 742 aa17.61■□□□□ 0.41
RPS28-202ENST00000449223 ENTPD8Q5MY95 495 aa17.61■□□□□ 0.41
RPS28-202ENST00000449223 AGAP7PQ5VUJ5 663 aa17.61■□□□□ 0.41
RPS28-202ENST00000449223 SLC30A6Q6NXT4 461 aa17.61■□□□□ 0.41
RPS28-202ENST00000449223 ZNF613Q6PF04 617 aa17.61■□□□□ 0.41
RPS28-202ENST00000449223 CBLN3Q6UW01 205 aa17.61■□□□□ 0.41
RPS28-202ENST00000449223 ISLR2Q6UXK2 745 aa17.61■□□□□ 0.41
RPS28-202ENST00000449223 ZNF227Q86WZ6 799 aa17.61■□□□□ 0.41
RPS28-202ENST00000449223 CYP4Z2PQ8N1L4 340 aa17.61■□□□□ 0.41
RPS28-202ENST00000449223 OR4C15Q8NGM1 316 aa17.61■□□□□ 0.41
RPS28-202ENST00000449223 ARSGQ96EG1 525 aa17.61■□□□□ 0.41
RPS28-202ENST00000449223 AGAP4Q96P64 663 aa17.61■□□□□ 0.41
RPS28-202ENST00000449223 ANGPTL4Q9BY76 406 aa17.61■□□□□ 0.41
RPS28-202ENST00000449223 TRIM2Q9C040 744 aa17.61■□□□□ 0.41
RPS28-202ENST00000449223 KCNMB2Q9Y691 235 aa17.61■□□□□ 0.41
RPS28-202ENST00000449223 DMXL2Q8TDJ6 3036 aa17.61■□□□□ 0.41
RPS28-202ENST00000449223 NCOR2Q9Y618 2525 aa17.6■□□□□ 0.41
RPS28-202ENST00000449223 PEX1O43933 1283 aa17.6■□□□□ 0.41
RPS28-202ENST00000449223 PEX2P28328 305 aa17.6■□□□□ 0.41
RPS28-202ENST00000449223 IFNA8P32881 189 aa17.6■□□□□ 0.41
RPS28-202ENST00000449223 YAP1P46937 504 aaKnown RBP17.6■□□□□ 0.41
RPS28-202ENST00000449223 P2RX1P51575 399 aa17.6■□□□□ 0.41
RPS28-202ENST00000449223 SUMO3P55854 103 aaPredicted RBP17.6■□□□□ 0.41
RPS28-202ENST00000449223 PIN1Q13526 163 aaPredicted RBP17.6■□□□□ 0.41
RPS28-202ENST00000449223 SLC22A10Q63ZE4 541 aa17.6■□□□□ 0.41
RPS28-202ENST00000449223 SHQ1Q6PI26 577 aaKnown RBP17.6■□□□□ 0.41
RPS28-202ENST00000449223 GATSQ8NAP1 163 aa17.6■□□□□ 0.41
RPS28-202ENST00000449223 OR5K1Q8NHB7 308 aa17.6■□□□□ 0.41
RPS28-202ENST00000449223 FUZQ9BT04 418 aa17.6■□□□□ 0.41
RPS28-202ENST00000449223 OSBPL11Q9BXB4 747 aa17.6■□□□□ 0.41
RPS28-202ENST00000449223 ZNF552Q9H707 407 aaPredicted RBP17.6■□□□□ 0.41
RPS28-202ENST00000449223 METTL7AQ9H8H3 244 aa17.6■□□□□ 0.41
RPS28-202ENST00000449223 C8orf4Q9NR00 106 aa17.6■□□□□ 0.41
RPS28-202ENST00000449223 SDHAF3Q9NRP4 125 aa17.6■□□□□ 0.41
RPS28-202ENST00000449223 MAN2C1Q9NTJ4 1040 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms