RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 FGF4P08620 206 aa25.27■■□□□ 1.64
CBX4-202ENST00000448310 LINGO3P0C6S8 592 aa25.27■■□□□ 1.64
CBX4-202ENST00000448310 LAMP1P11279 417 aa25.27■■□□□ 1.64
CBX4-202ENST00000448310 ME2P23368 584 aa25.27■■□□□ 1.64
CBX4-202ENST00000448310 LCN1P31025 176 aa25.27■■□□□ 1.64
CBX4-202ENST00000448310 SFTPDP35247 375 aa25.27■■□□□ 1.64
CBX4-202ENST00000448310 ZNF117Q03924 483 aa25.27■■□□□ 1.64
CBX4-202ENST00000448310 FOXF1Q12946 379 aa25.27■■□□□ 1.64
CBX4-202ENST00000448310 BEX5Q5H9J7 111 aa25.27■■□□□ 1.64
CBX4-202ENST00000448310 WFDC8Q8IUA0 241 aa25.27■■□□□ 1.64
CBX4-202ENST00000448310 LILRA2Q8N149 483 aa25.27■■□□□ 1.64
CBX4-202ENST00000448310 ROBO4Q8WZ75 1007 aa25.27■■□□□ 1.64
CBX4-202ENST00000448310 OSTF1Q92882 214 aa25.27■■□□□ 1.64
CBX4-202ENST00000448310 SLC17A7Q9P2U7 560 aa25.27■■□□□ 1.64
CBX4-202ENST00000448310 TRIM64A6NGJ6 449 aa25.26■■□□□ 1.63
CBX4-202ENST00000448310 TRIM64BA6NI03 449 aa25.26■■□□□ 1.63
CBX4-202ENST00000448310 PEX11AO75192 247 aa25.26■■□□□ 1.63
CBX4-202ENST00000448310 PLAUP00749 431 aa25.26■■□□□ 1.63
CBX4-202ENST00000448310 MLC1Q15049 377 aa25.26■■□□□ 1.63
CBX4-202ENST00000448310 LRIG3Q6UXM1 1119 aa25.26■■□□□ 1.63
CBX4-202ENST00000448310 ZCCHC23Q6ZST2 131 aa25.26■■□□□ 1.63
CBX4-202ENST00000448310 BANPQ8N9N5 519 aa25.26■■□□□ 1.63
CBX4-202ENST00000448310 PHOSPHO1Q8TCT1 267 aa25.26■■□□□ 1.63
CBX4-202ENST00000448310 ARSGQ96EG1 525 aa25.26■■□□□ 1.63
CBX4-202ENST00000448310 KLHL15Q96M94 604 aa25.26■■□□□ 1.63
CBX4-202ENST00000448310 STACQ99469 402 aa25.26■■□□□ 1.63
CBX4-202ENST00000448310 C1orf50Q9BV19 199 aa25.26■■□□□ 1.63
CBX4-202ENST00000448310 PIGUQ9H490 435 aa25.26■■□□□ 1.63
CBX4-202ENST00000448310 GLRX2Q9NS18 164 aa25.26■■□□□ 1.63
CBX4-202ENST00000448310 TMEM114B3SHH9 223 aa25.25■■□□□ 1.63
CBX4-202ENST00000448310 NPHS1O60500 1241 aa25.25■■□□□ 1.63
CBX4-202ENST00000448310 PPP3CBP16298 524 aa25.25■■□□□ 1.63
CBX4-202ENST00000448310 AGTR1P30556 359 aa25.25■■□□□ 1.63
CBX4-202ENST00000448310 PTGR1Q14914 329 aa25.25■■□□□ 1.63
CBX4-202ENST00000448310 PDSS1Q5T2R2 415 aa25.25■■□□□ 1.63
CBX4-202ENST00000448310 CBLN3Q6UW01 205 aa25.25■■□□□ 1.63
CBX4-202ENST00000448310 PRSS57Q6UWY2 283 aa25.25■■□□□ 1.63
CBX4-202ENST00000448310 ZNF704Q6ZNC4 412 aaPredicted RBP25.25■■□□□ 1.63
CBX4-202ENST00000448310 TRABD2AQ86V40 505 aa25.25■■□□□ 1.63
CBX4-202ENST00000448310 PPP3R2Q96LZ3 170 aa25.25■■□□□ 1.63
CBX4-202ENST00000448310 ACTR6Q9GZN1 396 aa25.25■■□□□ 1.63
CBX4-202ENST00000448310 DUSP22Q9NRW4 184 aa25.25■■□□□ 1.63
CBX4-202ENST00000448310 MKS1Q9NXB0 559 aa25.25■■□□□ 1.63
CBX4-202ENST00000448310 KCNE3Q9Y6H6 103 aa25.25■■□□□ 1.63
CBX4-202ENST00000448310 ZANQ9Y493 2812 aa25.25■■□□□ 1.63
CBX4-202ENST00000448310 EFNA2O43921 213 aa25.24■■□□□ 1.63
CBX4-202ENST00000448310 SPAG7O75391 227 aa25.24■■□□□ 1.63
CBX4-202ENST00000448310 TUBBP07437 444 aa25.24■■□□□ 1.63
CBX4-202ENST00000448310 ATP6V1C1P21283 382 aa25.24■■□□□ 1.63
CBX4-202ENST00000448310 CARD18P57730 90 aa25.24■■□□□ 1.63
CBX4-202ENST00000448310 TP53BP2Q13625 1128 aa25.24■■□□□ 1.63
CBX4-202ENST00000448310 XKR7Q5GH72 579 aa25.24■■□□□ 1.63
CBX4-202ENST00000448310 ALKBH2Q6NS38 261 aa25.24■■□□□ 1.63
CBX4-202ENST00000448310 CDC73Q6P1J9 531 aa25.24■■□□□ 1.63
CBX4-202ENST00000448310 BEND4Q6ZU67 534 aa25.24■■□□□ 1.63
CBX4-202ENST00000448310 PLEKHM3Q6ZWE6 761 aa25.24■■□□□ 1.63
CBX4-202ENST00000448310 ABHD3Q8WU67 409 aa25.24■■□□□ 1.63
CBX4-202ENST00000448310 PLPPR2Q96GM1 343 aa25.24■■□□□ 1.63
CBX4-202ENST00000448310 C3orf30Q96M34 536 aa25.24■■□□□ 1.63
CBX4-202ENST00000448310 SRXN1Q9BYN0 137 aa25.24■■□□□ 1.63
CBX4-202ENST00000448310 CXorf36Q9H7Y0 433 aa25.24■■□□□ 1.63
CBX4-202ENST00000448310 CSPG4Q6UVK1 2322 aa25.23■■□□□ 1.63
CBX4-202ENST00000448310 SLU7O95391 586 aaKnown RBP25.23■■□□□ 1.63
CBX4-202ENST00000448310 NTN1O95631 604 aa25.23■■□□□ 1.63
CBX4-202ENST00000448310 HSPA4LO95757 839 aa25.23■■□□□ 1.63
CBX4-202ENST00000448310 NUDT14O95848 222 aa25.23■■□□□ 1.63
CBX4-202ENST00000448310 DDX5P17844 614 aaKnown RBP25.23■■□□□ 1.63
CBX4-202ENST00000448310 MAPK1P28482 360 aa25.23■■□□□ 1.63
CBX4-202ENST00000448310 ARRB2P32121 409 aa25.23■■□□□ 1.63
CBX4-202ENST00000448310 PTH2RP49190 550 aa25.23■■□□□ 1.63
CBX4-202ENST00000448310 CCT3P49368 545 aaKnown RBP25.23■■□□□ 1.63
CBX4-202ENST00000448310 ZNF239Q16600 458 aaKnown RBP25.23■■□□□ 1.63
CBX4-202ENST00000448310 NDUFAF6Q330K2 333 aa25.23■■□□□ 1.63
CBX4-202ENST00000448310 DDX59Q5T1V6 619 aaKnown RBP eCLIP25.23■■□□□ 1.63
CBX4-202ENST00000448310 STK32CQ86UX6 486 aa25.23■■□□□ 1.63
CBX4-202ENST00000448310 KRTCAP2Q8N6L1 136 aa25.23■■□□□ 1.63
CBX4-202ENST00000448310 FBXO27Q8NI29 283 aa25.23■■□□□ 1.63
CBX4-202ENST00000448310 BDH2Q9BUT1 245 aa25.23■■□□□ 1.63
CBX4-202ENST00000448310 ACTRT3Q9BYD9 372 aa25.23■■□□□ 1.63
CBX4-202ENST00000448310 EML4Q9HC35 981 aaKnown RBP25.23■■□□□ 1.63
CBX4-202ENST00000448310 CARD8Q9Y2G2 431 aa25.23■■□□□ 1.63
CBX4-202ENST00000448310 FAM171A2A8MVW0 826 aa25.22■■□□□ 1.63
CBX4-202ENST00000448310 SKAP2O75563 359 aaPredicted RBP25.22■■□□□ 1.63
CBX4-202ENST00000448310 C6orf47O95873 294 aa25.22■■□□□ 1.63
CBX4-202ENST00000448310 RPL3P39023 403 aaKnown RBP25.22■■□□□ 1.63
CBX4-202ENST00000448310 EIF1P41567 113 aaKnown RBP25.22■■□□□ 1.63
CBX4-202ENST00000448310 ZNF844Q08AG5 666 aa25.22■■□□□ 1.63
CBX4-202ENST00000448310 TOMM34Q15785 309 aaPredicted RBP25.22■■□□□ 1.63
CBX4-202ENST00000448310 SPDYE7PQ495Y7 208 aa25.22■■□□□ 1.63
CBX4-202ENST00000448310 DCST2Q5T1A1 773 aa25.22■■□□□ 1.63
CBX4-202ENST00000448310 ATP6V1C2Q8NEY4 427 aa25.22■■□□□ 1.63
CBX4-202ENST00000448310 ADAMTS15Q8TE58 950 aa25.22■■□□□ 1.63
CBX4-202ENST00000448310 RNF128Q8TEB7 428 aa25.22■■□□□ 1.63
CBX4-202ENST00000448310 IGFBPL1Q8WX77 278 aa25.22■■□□□ 1.63
CBX4-202ENST00000448310 OR5P2Q8WZ92 322 aa25.22■■□□□ 1.63
CBX4-202ENST00000448310 GSX2Q9BZM3 304 aa25.22■■□□□ 1.63
CBX4-202ENST00000448310 FANCFQ9NPI8 374 aa25.22■■□□□ 1.63
CBX4-202ENST00000448310 GPATCH2Q9NW75 528 aa25.22■■□□□ 1.63
CBX4-202ENST00000448310 ICAM5Q9UMF0 924 aa25.22■■□□□ 1.63
CBX4-202ENST00000448310 JMJD1CQ15652 2540 aa25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms