RNA–Protein interactions for RNA: ENST00000446317.1

SF3A3P1-201, Transcript of splicing factor 3a, subunit 3 pseudogene 1, humanhuman

BASIC

Gene SF3A3P1, Length 1,477 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3P1-201ENST00000446317 DTNAQ9Y4J8 743 aa6.9□□□□□ -1.31
SF3A3P1-201ENST00000446317 DSPP15924 2871 aaKnown RBP6.9□□□□□ -1.31
SF3A3P1-201ENST00000446317 DSPPQ9NZW4 1301 aa6.9□□□□□ -1.31
SF3A3P1-201ENST00000446317 CHD8Q9HCK8 2581 aa6.9□□□□□ -1.31
SF3A3P1-201ENST00000446317 SPENQ96T58 3664 aaKnown RBP6.89□□□□□ -1.31
SF3A3P1-201ENST00000446317 SEC16AO15027 2179 aa6.89□□□□□ -1.31
SF3A3P1-201ENST00000446317 TMEM8BA6NDV4 472 aa6.89□□□□□ -1.31
SF3A3P1-201ENST00000446317 NPIPB9F8W1W9 429 aa6.89□□□□□ -1.31
SF3A3P1-201ENST00000446317 TIPRLO75663 272 aa6.89□□□□□ -1.31
SF3A3P1-201ENST00000446317 CEACAM4O75871 244 aa6.89□□□□□ -1.31
SF3A3P1-201ENST00000446317 STAMBPO95630 424 aa6.89□□□□□ -1.31
SF3A3P1-201ENST00000446317 AK1P00568 194 aa6.89□□□□□ -1.31
SF3A3P1-201ENST00000446317 ITGB2P05107 769 aa6.89□□□□□ -1.31
SF3A3P1-201ENST00000446317 IFI6P09912 130 aa6.89□□□□□ -1.31
SF3A3P1-201ENST00000446317 CD46P15529 392 aa6.89□□□□□ -1.31
SF3A3P1-201ENST00000446317 IL11P20809 199 aa6.89□□□□□ -1.31
SF3A3P1-201ENST00000446317 CBLP22681 906 aa6.89□□□□□ -1.31
SF3A3P1-201ENST00000446317 GDF1P27539 372 aa6.89□□□□□ -1.31
SF3A3P1-201ENST00000446317 HTR2AP28223 471 aa6.89□□□□□ -1.31
SF3A3P1-201ENST00000446317 PEX19P40855 299 aa6.89□□□□□ -1.31
SF3A3P1-201ENST00000446317 KCNJ5P48544 419 aa6.89□□□□□ -1.31
SF3A3P1-201ENST00000446317 IDH2P48735 452 aaKnown RBP6.89□□□□□ -1.31
SF3A3P1-201ENST00000446317 TMED10P49755 219 aaKnown RBP6.89□□□□□ -1.31
SF3A3P1-201ENST00000446317 TNFSF10P50591 281 aa6.89□□□□□ -1.31
SF3A3P1-201ENST00000446317 GAS1P54826 345 aa6.89□□□□□ -1.31
SF3A3P1-201ENST00000446317 SOX8P57073 446 aa6.89□□□□□ -1.31
SF3A3P1-201ENST00000446317 RGS8P57771 180 aaPredicted RBP6.89□□□□□ -1.31
SF3A3P1-201ENST00000446317 KCNJ10P78508 379 aa6.89□□□□□ -1.31
SF3A3P1-201ENST00000446317 HSF1Q00613 529 aa6.89□□□□□ -1.31
SF3A3P1-201ENST00000446317 BNIP2Q12982 314 aa6.89□□□□□ -1.31
SF3A3P1-201ENST00000446317 GNA13Q14344 377 aa6.89□□□□□ -1.31
SF3A3P1-201ENST00000446317 FGFBP1Q14512 234 aa6.89□□□□□ -1.31
SF3A3P1-201ENST00000446317 LARS2Q15031 903 aaKnown RBP6.89□□□□□ -1.31
SF3A3P1-201ENST00000446317 ZNF141Q15928 474 aa6.89□□□□□ -1.31
SF3A3P1-201ENST00000446317 RNFT1Q5M7Z0 435 aa6.89□□□□□ -1.31
SF3A3P1-201ENST00000446317 INTS11Q5TA45 600 aaKnown RBP6.89□□□□□ -1.31
SF3A3P1-201ENST00000446317 LCE2DQ5TA82 110 aaPredicted RBP6.89□□□□□ -1.31
SF3A3P1-201ENST00000446317 AP1ARQ63HQ0 302 aa6.89□□□□□ -1.31
SF3A3P1-201ENST00000446317 SLC25A25Q6KCM7 469 aa6.89□□□□□ -1.31
SF3A3P1-201ENST00000446317 YTHDF3Q7Z739 585 aaKnown RBP6.89□□□□□ -1.31
SF3A3P1-201ENST00000446317 PATL1Q86TB9 770 aaKnown RBP6.89□□□□□ -1.31
SF3A3P1-201ENST00000446317 ARHGAP24Q8N264 748 aa6.89□□□□□ -1.31
SF3A3P1-201ENST00000446317 WDSUB1Q8N9V3 476 aa6.89□□□□□ -1.31
SF3A3P1-201ENST00000446317 ZNF527Q8NB42 609 aa6.89□□□□□ -1.31
SF3A3P1-201ENST00000446317 C7orf57Q8NEG2 295 aa6.89□□□□□ -1.31
SF3A3P1-201ENST00000446317 C17orf47Q8NEP4 570 aa6.89□□□□□ -1.31
SF3A3P1-201ENST00000446317 TNIP2Q8NFZ5 429 aa6.89□□□□□ -1.31
SF3A3P1-201ENST00000446317 OR2M7Q8NG81 312 aa6.89□□□□□ -1.31
SF3A3P1-201ENST00000446317 OR6T1Q8NGN1 323 aa6.89□□□□□ -1.31
SF3A3P1-201ENST00000446317 OR52J3Q8NH60 311 aa6.89□□□□□ -1.31
SF3A3P1-201ENST00000446317 CANT1Q8WVQ1 401 aa6.89□□□□□ -1.31
SF3A3P1-201ENST00000446317 PROX1Q92786 737 aa6.89□□□□□ -1.31
SF3A3P1-201ENST00000446317 SLCO4A1Q96BD0 722 aa6.89□□□□□ -1.31
SF3A3P1-201ENST00000446317 ASB9Q96DX5 294 aa6.89□□□□□ -1.31
SF3A3P1-201ENST00000446317 UBL7Q96S82 380 aaPredicted RBP6.89□□□□□ -1.31
SF3A3P1-201ENST00000446317 SPATA9Q9BWV2 254 aa6.89□□□□□ -1.31
SF3A3P1-201ENST00000446317 AMBRA1Q9C0C7 1298 aa6.89□□□□□ -1.31
SF3A3P1-201ENST00000446317 BCL2L10Q9HD36 194 aa6.89□□□□□ -1.31
SF3A3P1-201ENST00000446317 TIMMDC1Q9NPL8 285 aa6.89□□□□□ -1.31
SF3A3P1-201ENST00000446317 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.89□□□□□ -1.31
SF3A3P1-201ENST00000446317 DCAF13Q9NV06 445 aaKnown RBP6.89□□□□□ -1.31
SF3A3P1-201ENST00000446317 ADPRHL2Q9NX46 363 aa6.89□□□□□ -1.31
SF3A3P1-201ENST00000446317 THUMPD1Q9NXG2 353 aaKnown RBP6.89□□□□□ -1.31
SF3A3P1-201ENST00000446317 DNAJB12Q9NXW2 375 aaKnown RBP6.89□□□□□ -1.31
SF3A3P1-201ENST00000446317 CALML5Q9NZT1 146 aa6.89□□□□□ -1.31
SF3A3P1-201ENST00000446317 ACTR3BQ9P1U1 418 aa6.89□□□□□ -1.31
SF3A3P1-201ENST00000446317 ZNF232Q9UNY5 417 aa6.89□□□□□ -1.31
SF3A3P1-201ENST00000446317 ZNF451Q9Y4E5 1061 aa6.89□□□□□ -1.31
SF3A3P1-201ENST00000446317 TESMINQ9Y4I5 508 aa6.89□□□□□ -1.31
SF3A3P1-201ENST00000446317 WIF1Q9Y5W5 379 aa6.89□□□□□ -1.31
SF3A3P1-201ENST00000446317 LIPGQ9Y5X9 500 aa6.89□□□□□ -1.31
SF3A3P1-201ENST00000446317 BOD1L1Q8NFC6 3051 aa6.89□□□□□ -1.31
SF3A3P1-201ENST00000446317 APC2O95996 2303 aa6.88□□□□□ -1.31
SF3A3P1-201ENST00000446317 DHRS12A0PJE2 317 aa6.88□□□□□ -1.31
SF3A3P1-201ENST00000446317 LRRC3CA6NJW4 275 aa6.88□□□□□ -1.31
SF3A3P1-201ENST00000446317 KPNA4O00629 521 aaPredicted RBP6.88□□□□□ -1.31
SF3A3P1-201ENST00000446317 ZNF264O43296 627 aa6.88□□□□□ -1.31
SF3A3P1-201ENST00000446317 NME2P1O60361 137 aa6.88□□□□□ -1.31
SF3A3P1-201ENST00000446317 SERPINB7O75635 380 aa6.88□□□□□ -1.31
SF3A3P1-201ENST00000446317 BAG2O95816 211 aa6.88□□□□□ -1.31
SF3A3P1-201ENST00000446317 PRB1P04280 392 aa6.88□□□□□ -1.31
SF3A3P1-201ENST00000446317 PEPDP12955 493 aa6.88□□□□□ -1.31
SF3A3P1-201ENST00000446317 NID1P14543 1247 aa6.88□□□□□ -1.31
SF3A3P1-201ENST00000446317 CNR1P21554 472 aa6.88□□□□□ -1.31
SF3A3P1-201ENST00000446317 RPS4Y1P22090 263 aaKnown RBP6.88□□□□□ -1.31
SF3A3P1-201ENST00000446317 NME2P22392 152 aa6.88□□□□□ -1.31
SF3A3P1-201ENST00000446317 MAGEA5P43359 124 aa6.88□□□□□ -1.31
SF3A3P1-201ENST00000446317 CLK3P49761 638 aaKnown RBP6.88□□□□□ -1.31
SF3A3P1-201ENST00000446317 IST1P53990 364 aa6.88□□□□□ -1.31
SF3A3P1-201ENST00000446317 AP2B1P63010 937 aa6.88□□□□□ -1.31
SF3A3P1-201ENST00000446317 LSM11P83369 360 aaKnown RBP eCLIP6.88□□□□□ -1.31
SF3A3P1-201ENST00000446317 VLDLRP98155 873 aa6.88□□□□□ -1.31
SF3A3P1-201ENST00000446317 FOXF1Q12946 379 aa6.88□□□□□ -1.31
SF3A3P1-201ENST00000446317 SKP2Q13309 424 aa6.88□□□□□ -1.31
SF3A3P1-201ENST00000446317 PIN1Q13526 163 aaPredicted RBP6.88□□□□□ -1.31
SF3A3P1-201ENST00000446317 VEZF1Q14119 521 aa6.88□□□□□ -1.31
SF3A3P1-201ENST00000446317 CRTC2Q53ET0 693 aaPredicted RBP6.88□□□□□ -1.31
SF3A3P1-201ENST00000446317 EIPR1Q53HC9 387 aa6.88□□□□□ -1.31
SF3A3P1-201ENST00000446317 WIPI1Q5MNZ9 446 aaPredicted RBP6.88□□□□□ -1.31
SF3A3P1-201ENST00000446317 TBCELQ5QJ74 424 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms