RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 SPARCP09486 303 aa15.57■□□□□ 0.08
TCOF1-206ENST00000445265 HNRNPA2B1P22626 353 aaKnown RBP15.57■□□□□ 0.08
TCOF1-206ENST00000445265 RBMS1P29558 406 aaKnown RBP15.57■□□□□ 0.08
TCOF1-206ENST00000445265 RASGEF1BQ0VAM2 473 aa15.57■□□□□ 0.08
TCOF1-206ENST00000445265 HBMQ6B0K9 141 aa15.57■□□□□ 0.08
TCOF1-206ENST00000445265 ZNF101Q8IZC7 436 aa15.57■□□□□ 0.08
TCOF1-206ENST00000445265 OR52N1Q8NH53 320 aa15.57■□□□□ 0.08
TCOF1-206ENST00000445265 ADAMTS14Q8WXS8 1223 aa15.57■□□□□ 0.08
TCOF1-206ENST00000445265 SLC25A46Q96AG3 418 aa15.57■□□□□ 0.08
TCOF1-206ENST00000445265 ORAI3Q9BRQ5 295 aa15.57■□□□□ 0.08
TCOF1-206ENST00000445265 C11orf54Q9H0W9 315 aaPredicted RBP15.57■□□□□ 0.08
TCOF1-206ENST00000445265 ASB6Q9NWX5 421 aa15.57■□□□□ 0.08
TCOF1-206ENST00000445265 SAGE1Q9NXZ1 904 aa15.57■□□□□ 0.08
TCOF1-206ENST00000445265 AK6Q9Y3D8 172 aaKnown RBP15.57■□□□□ 0.08
TCOF1-206ENST00000445265 PSMD9O00233 223 aa15.57■□□□□ 0.08
TCOF1-206ENST00000445265 HTR1FP30939 366 aa15.57■□□□□ 0.08
TCOF1-206ENST00000445265 TSFMP43897 325 aaKnown RBP15.57■□□□□ 0.08
TCOF1-206ENST00000445265 ARHGAP40Q5TG30 622 aa15.57■□□□□ 0.08
TCOF1-206ENST00000445265 RBM45Q8IUH3 476 aaKnown RBP15.57■□□□□ 0.08
TCOF1-206ENST00000445265 UBQLNLQ8IYU4 475 aa15.57■□□□□ 0.08
TCOF1-206ENST00000445265 C7orf34Q96L11 122 aa15.57■□□□□ 0.08
TCOF1-206ENST00000445265 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.57■□□□□ 0.08
TCOF1-206ENST00000445265 POLR2AP24928 1970 aaKnown RBP15.57■□□□□ 0.08
TCOF1-206ENST00000445265 ZNFX1Q9P2E3 1918 aaKnown RBP15.57■□□□□ 0.08
TCOF1-206ENST00000445265 C11orf98E9PRG8 122 aa15.57■□□□□ 0.08
TCOF1-206ENST00000445265 SOX1O00570 391 aaPredicted RBP15.57■□□□□ 0.08
TCOF1-206ENST00000445265 FUT1P19526 365 aa15.57■□□□□ 0.08
TCOF1-206ENST00000445265 ADH7P40394 386 aa15.57■□□□□ 0.08
TCOF1-206ENST00000445265 METTL11BQ5VVY1 283 aa15.57■□□□□ 0.08
TCOF1-206ENST00000445265 SLC48A1Q6P1K1 146 aa15.57■□□□□ 0.08
TCOF1-206ENST00000445265 ABHD17CQ6PCB6 329 aa15.57■□□□□ 0.08
TCOF1-206ENST00000445265 GDPD3Q7L5L3 318 aa15.57■□□□□ 0.08
TCOF1-206ENST00000445265 OR2L3Q8NG85 312 aa15.57■□□□□ 0.08
TCOF1-206ENST00000445265 CST11Q9H112 138 aa15.57■□□□□ 0.08
TCOF1-206ENST00000445265 OR10A4Q9H209 315 aa15.57■□□□□ 0.08
TCOF1-206ENST00000445265 C12orf4Q9NQ89 552 aa15.57■□□□□ 0.08
TCOF1-206ENST00000445265 SDHAF3Q9NRP4 125 aa15.57■□□□□ 0.08
TCOF1-206ENST00000445265 MRPL15Q9P015 296 aaKnown RBP15.57■□□□□ 0.08
TCOF1-206ENST00000445265 MEMO1Q9Y316 297 aa15.57■□□□□ 0.08
TCOF1-206ENST00000445265 NPIPA5A0A0B4J1W7 369 aa15.57■□□□□ 0.08
TCOF1-206ENST00000445265 SERTM1A2A2V5 107 aa15.57■□□□□ 0.08
TCOF1-206ENST00000445265 NPIPA7E9PJI5 369 aa15.57■□□□□ 0.08
TCOF1-206ENST00000445265 HMGN4O00479 90 aa15.57■□□□□ 0.08
TCOF1-206ENST00000445265 GPR75O95800 540 aa15.57■□□□□ 0.08
TCOF1-206ENST00000445265 LGI1O95970 557 aa15.57■□□□□ 0.08
TCOF1-206ENST00000445265 CLEC2LP0C7M8 214 aa15.57■□□□□ 0.08
TCOF1-206ENST00000445265 NPIPA8P0DM63 369 aa15.57■□□□□ 0.08
TCOF1-206ENST00000445265 VAMP1P23763 118 aa15.57■□□□□ 0.08
TCOF1-206ENST00000445265 CTXN1P60606 82 aa15.57■□□□□ 0.08
TCOF1-206ENST00000445265 MRPS10P82664 201 aaKnown RBP15.57■□□□□ 0.08
TCOF1-206ENST00000445265 DPTQ07507 201 aa15.57■□□□□ 0.08
TCOF1-206ENST00000445265 FGFBP1Q14512 234 aa15.57■□□□□ 0.08
TCOF1-206ENST00000445265 HES5Q5TA89 166 aa15.57■□□□□ 0.08
TCOF1-206ENST00000445265 METRNLQ641Q3 311 aa15.57■□□□□ 0.08
TCOF1-206ENST00000445265 TCTN3Q6NUS6 607 aa15.57■□□□□ 0.08
TCOF1-206ENST00000445265 FTMTQ8N4E7 242 aa15.57■□□□□ 0.08
TCOF1-206ENST00000445265 RBP7Q96R05 134 aa15.57■□□□□ 0.08
TCOF1-206ENST00000445265 PSD2Q9BQI7 771 aa15.57■□□□□ 0.08
TCOF1-206ENST00000445265 SLIRPQ9GZT3 109 aaKnown RBP15.57■□□□□ 0.08
TCOF1-206ENST00000445265 CLDND1Q9NY35 253 aa15.57■□□□□ 0.08
TCOF1-206ENST00000445265 PPIL1Q9Y3C6 166 aa15.57■□□□□ 0.08
TCOF1-206ENST00000445265 HCFC2Q9Y5Z7 792 aa15.57■□□□□ 0.08
TCOF1-206ENST00000445265 CYB5AP00167 134 aa15.56■□□□□ 0.08
TCOF1-206ENST00000445265 GRK5P34947 590 aa15.56■□□□□ 0.08
TCOF1-206ENST00000445265 MTNR1BP49286 362 aa15.56■□□□□ 0.08
TCOF1-206ENST00000445265 ULK3Q6PHR2 472 aa15.56■□□□□ 0.08
TCOF1-206ENST00000445265 SLC16A12Q6ZSM3 486 aa15.56■□□□□ 0.08
TCOF1-206ENST00000445265 TMEM234Q8WY98 164 aa15.56■□□□□ 0.08
TCOF1-206ENST00000445265 NXPE2Q96DL1 559 aa15.56■□□□□ 0.08
TCOF1-206ENST00000445265 NEURL2Q9BR09 285 aa15.56■□□□□ 0.08
TCOF1-206ENST00000445265 NDUFB11Q9NX14 153 aa15.56■□□□□ 0.08
TCOF1-206ENST00000445265 DHDHQ9UQ10 334 aa15.56■□□□□ 0.08
TCOF1-206ENST00000445265 KCNE1BA0A087WTH5 132 aa15.56■□□□□ 0.08
TCOF1-206ENST00000445265 FMO6PO60774 539 aa15.56■□□□□ 0.08
TCOF1-206ENST00000445265 CSRP3P50461 194 aa15.56■□□□□ 0.08
TCOF1-206ENST00000445265 ZNF77Q15935 545 aa15.56■□□□□ 0.08
TCOF1-206ENST00000445265 FAM69AQ5T7M9 428 aa15.56■□□□□ 0.08
TCOF1-206ENST00000445265 PNLDC1Q8NA58 520 aaKnown RBP15.56■□□□□ 0.08
TCOF1-206ENST00000445265 OR5AK2Q8NH90 309 aa15.56■□□□□ 0.08
TCOF1-206ENST00000445265 LMX1AQ8TE12 382 aa15.56■□□□□ 0.08
TCOF1-206ENST00000445265 SNAPC3Q92966 411 aa15.56■□□□□ 0.08
TCOF1-206ENST00000445265 PEX11GQ96HA9 241 aa15.56■□□□□ 0.08
TCOF1-206ENST00000445265 PRSS16Q9NQE7 514 aa15.56■□□□□ 0.08
TCOF1-206ENST00000445265 HSD11B1P28845 292 aa15.56■□□□□ 0.08
TCOF1-206ENST00000445265 HOXA9P31269 272 aa15.56■□□□□ 0.08
TCOF1-206ENST00000445265 TNFRSF17Q02223 184 aa15.56■□□□□ 0.08
TCOF1-206ENST00000445265 GBX1Q14549 363 aa15.56■□□□□ 0.08
TCOF1-206ENST00000445265 ELOCQ15369 112 aa15.56■□□□□ 0.08
TCOF1-206ENST00000445265 MRPL2Q5T653 305 aaKnown RBP15.56■□□□□ 0.08
TCOF1-206ENST00000445265 GALNTL5Q7Z4T8 443 aa15.56■□□□□ 0.08
TCOF1-206ENST00000445265 SDR9C7Q8NEX9 313 aa15.56■□□□□ 0.08
TCOF1-206ENST00000445265 PDE7BQ9NP56 450 aa15.56■□□□□ 0.08
TCOF1-206ENST00000445265 SIDT1Q9NXL6 827 aaKnown RBP15.56■□□□□ 0.08
TCOF1-206ENST00000445265 ATG4BQ9Y4P1 393 aa15.56■□□□□ 0.08
TCOF1-206ENST00000445265 LOC105369274A0A096LPK9 316 aa15.56■□□□□ 0.08
TCOF1-206ENST00000445265 CXCL10P02778 98 aa15.56■□□□□ 0.08
TCOF1-206ENST00000445265 FCER2P06734 321 aa15.56■□□□□ 0.08
TCOF1-206ENST00000445265 WNT3P56703 355 aa15.56■□□□□ 0.08
TCOF1-206ENST00000445265 C18orf63Q68DL7 685 aa15.56■□□□□ 0.08
TCOF1-206ENST00000445265 OR4N4Q8N0Y3 316 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms