RNA–Protein interactions for RNA: ENST00000444983.6

CCNE1-203, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-203ENST00000444983 TBCELQ5QJ74 424 aa13.8□□□□□ -0.2
CCNE1-203ENST00000444983 PRAMEF20Q5VT98 475 aa13.8□□□□□ -0.2
CCNE1-203ENST00000444983 WDSUB1Q8N9V3 476 aa13.8□□□□□ -0.2
CCNE1-203ENST00000444983 PHOSPHO1Q8TCT1 267 aa13.8□□□□□ -0.2
CCNE1-203ENST00000444983 DUSP19Q8WTR2 217 aa13.8□□□□□ -0.2
CCNE1-203ENST00000444983 PROX1Q92786 737 aa13.8□□□□□ -0.2
CCNE1-203ENST00000444983 SCMH1Q96GD3 660 aa13.8□□□□□ -0.2
CCNE1-203ENST00000444983 OSBPL11Q9BXB4 747 aa13.8□□□□□ -0.2
CCNE1-203ENST00000444983 UGT2B28Q9BY64 529 aa13.8□□□□□ -0.2
CCNE1-203ENST00000444983 ARMC7Q9H6L4 198 aa13.8□□□□□ -0.2
CCNE1-203ENST00000444983 METTL7AQ9H8H3 244 aa13.8□□□□□ -0.2
CCNE1-203ENST00000444983 EVA1AQ9H8M9 152 aa13.8□□□□□ -0.2
CCNE1-203ENST00000444983 CACYBPQ9HB71 228 aaKnown RBP13.8□□□□□ -0.2
CCNE1-203ENST00000444983 IL1RAPQ9NPH3 570 aa13.8□□□□□ -0.2
CCNE1-203ENST00000444983 TIMMDC1Q9NPL8 285 aa13.8□□□□□ -0.2
CCNE1-203ENST00000444983 KLRF1Q9NZS2 232 aa13.8□□□□□ -0.2
CCNE1-203ENST00000444983 PCDHGB6Q9Y5F9 930 aa13.8□□□□□ -0.2
CCNE1-203ENST00000444983 HRH3Q9Y5N1 445 aa13.8□□□□□ -0.2
CCNE1-203ENST00000444983 CSAG2Q9Y5P2 127 aa13.8□□□□□ -0.2
CCNE1-203ENST00000444983 USP24Q9UPU5 2620 aa13.8□□□□□ -0.2
CCNE1-203ENST00000444983 MKRN2OSH3BPM6 223 aa13.79□□□□□ -0.2
CCNE1-203ENST00000444983 K7EM74 188 aa13.79□□□□□ -0.2
CCNE1-203ENST00000444983 EIF4E2O60573 245 aaKnown RBP13.79□□□□□ -0.2
CCNE1-203ENST00000444983 TRIM3O75382 744 aaPredicted RBP13.79□□□□□ -0.2
CCNE1-203ENST00000444983 SNX4O95219 450 aa13.79□□□□□ -0.2
CCNE1-203ENST00000444983 UBL4AP11441 157 aa13.79□□□□□ -0.2
CCNE1-203ENST00000444983 TNFRSF1BP20333 461 aa13.79□□□□□ -0.2
CCNE1-203ENST00000444983 ARG2P78540 354 aa13.79□□□□□ -0.2
CCNE1-203ENST00000444983 VLDLRP98155 873 aa13.79□□□□□ -0.2
CCNE1-203ENST00000444983 KCNC4Q03721 635 aa13.79□□□□□ -0.2
CCNE1-203ENST00000444983 INPP5JQ15735 1006 aaPredicted RBP13.79□□□□□ -0.2
CCNE1-203ENST00000444983 NDUFAF6Q330K2 333 aa13.79□□□□□ -0.2
CCNE1-203ENST00000444983 PIWIL3Q7Z3Z3 882 aaKnown RBP13.79□□□□□ -0.2
CCNE1-203ENST00000444983 GATSQ8NAP1 163 aa13.79□□□□□ -0.2
CCNE1-203ENST00000444983 CATSPER1Q8NEC5 780 aa13.79□□□□□ -0.2
CCNE1-203ENST00000444983 OR6T1Q8NGN1 323 aa13.79□□□□□ -0.2
CCNE1-203ENST00000444983 PHF10Q8WUB8 498 aaKnown RBP13.79□□□□□ -0.2
CCNE1-203ENST00000444983 GEMIN6Q8WXD5 167 aaKnown RBP13.79□□□□□ -0.2
CCNE1-203ENST00000444983 ABHD17AQ96GS6 310 aa13.79□□□□□ -0.2
CCNE1-203ENST00000444983 SEPHS2Q99611 448 aa13.79□□□□□ -0.2
CCNE1-203ENST00000444983 AMBRA1Q9C0C7 1298 aa13.79□□□□□ -0.2
CCNE1-203ENST00000444983 LAT2Q9GZY6 243 aa13.79□□□□□ -0.2
CCNE1-203ENST00000444983 ANAPC2Q9UJX6 822 aa13.79□□□□□ -0.2
CCNE1-203ENST00000444983 CARD8Q9Y2G2 431 aa13.79□□□□□ -0.2
CCNE1-203ENST00000444983 V9GYQ6 96 aa13.79□□□□□ -0.2
CCNE1-203ENST00000444983 PIEZO2Q9H5I5 2752 aa13.79□□□□□ -0.2
CCNE1-203ENST00000444983 A0A0G2JMM0 328 aa13.79□□□□□ -0.2
CCNE1-203ENST00000444983 A0A1W2PPB8 328 aa13.79□□□□□ -0.2
CCNE1-203ENST00000444983 A0A1W2PRS3 328 aa13.79□□□□□ -0.2
CCNE1-203ENST00000444983 C2orf72A6NCS6 295 aa13.79□□□□□ -0.2
CCNE1-203ENST00000444983 KIR3DP1A8MWS1 328 aa13.79□□□□□ -0.2
CCNE1-203ENST00000444983 M0R3H8 397 aa13.79□□□□□ -0.2
CCNE1-203ENST00000444983 FRS3O43559 492 aa13.79□□□□□ -0.2
CCNE1-203ENST00000444983 NME2P1O60361 137 aa13.79□□□□□ -0.2
CCNE1-203ENST00000444983 P04436 131 aa13.79□□□□□ -0.2
CCNE1-203ENST00000444983 SP1P08047 785 aa13.79□□□□□ -0.2
CCNE1-203ENST00000444983 UBTFL6P0CB48 400 aaPredicted RBP13.79□□□□□ -0.2
CCNE1-203ENST00000444983 RAP2AP10114 183 aa13.79□□□□□ -0.2
CCNE1-203ENST00000444983 PRG2P13727 222 aa13.79□□□□□ -0.2
CCNE1-203ENST00000444983 HOXB6P17509 224 aaKnown RBP13.79□□□□□ -0.2
CCNE1-203ENST00000444983 CNR1P21554 472 aa13.79□□□□□ -0.2
CCNE1-203ENST00000444983 NME2P22392 152 aa13.79□□□□□ -0.2
CCNE1-203ENST00000444983 PSMA4P25789 261 aaKnown RBP13.79□□□□□ -0.2
CCNE1-203ENST00000444983 SLC7A1P30825 629 aa13.79□□□□□ -0.2
CCNE1-203ENST00000444983 SLC25A25Q6KCM7 469 aa13.79□□□□□ -0.2
CCNE1-203ENST00000444983 FKBP9P1Q75LS8 142 aa13.79□□□□□ -0.2
CCNE1-203ENST00000444983 CARM1Q86X55 608 aa13.79□□□□□ -0.2
CCNE1-203ENST00000444983 RBM45Q8IUH3 476 aaKnown RBP13.79□□□□□ -0.2
CCNE1-203ENST00000444983 SLC47A1Q96FL8 570 aa13.79□□□□□ -0.2
CCNE1-203ENST00000444983 TMEM41AQ96HV5 264 aa13.79□□□□□ -0.2
CCNE1-203ENST00000444983 KLHDC3Q9BQ90 382 aa13.79□□□□□ -0.2
CCNE1-203ENST00000444983 HES7Q9BYE0 225 aa13.79□□□□□ -0.2
CCNE1-203ENST00000444983 SDHAF3Q9NRP4 125 aa13.79□□□□□ -0.2
CCNE1-203ENST00000444983 ARMC1Q9NVT9 282 aa13.79□□□□□ -0.2
CCNE1-203ENST00000444983 KLHL28Q9NXS3 571 aa13.79□□□□□ -0.2
CCNE1-203ENST00000444983 BOD1L1Q8NFC6 3051 aa13.78□□□□□ -0.2
CCNE1-203ENST00000444983 H3BNX3 289 aa13.78□□□□□ -0.2
CCNE1-203ENST00000444983 GKN3PP0CG01 181 aa13.78□□□□□ -0.2
CCNE1-203ENST00000444983 FOXO1Q12778 655 aa13.78□□□□□ -0.2
CCNE1-203ENST00000444983 FAM98BQ52LJ0 330 aaKnown RBP13.78□□□□□ -0.2
CCNE1-203ENST00000444983 TSPYL5Q86VY4 417 aaPredicted RBP13.78□□□□□ -0.2
CCNE1-203ENST00000444983 FADS6Q8N9I5 356 aa13.78□□□□□ -0.2
CCNE1-203ENST00000444983 TOR1AIP2Q8NFQ8 470 aa13.78□□□□□ -0.2
CCNE1-203ENST00000444983 ZNF524Q96C55 264 aa13.78□□□□□ -0.2
CCNE1-203ENST00000444983 ARSGQ96EG1 525 aa13.78□□□□□ -0.2
CCNE1-203ENST00000444983 HHATLQ9HCP6 504 aa13.78□□□□□ -0.2
CCNE1-203ENST00000444983 NDUFAF4Q9P032 175 aa13.78□□□□□ -0.2
CCNE1-203ENST00000444983 TUBD1Q9UJT1 453 aa13.78□□□□□ -0.2
CCNE1-203ENST00000444983 SLC9A8Q9Y2E8 581 aa13.78□□□□□ -0.2
CCNE1-203ENST00000444983 RRP15Q9Y3B9 282 aaKnown RBP13.78□□□□□ -0.2
CCNE1-203ENST00000444983 PINLYPA6NC86 204 aa13.77□□□□□ -0.21
CCNE1-203ENST00000444983 GTPBP1O00178 669 aaKnown RBP13.77□□□□□ -0.21
CCNE1-203ENST00000444983 FAAHO00519 579 aa13.77□□□□□ -0.21
CCNE1-203ENST00000444983 SNPHO15079 494 aa13.77□□□□□ -0.21
CCNE1-203ENST00000444983 HCRTR2O43614 444 aa13.77□□□□□ -0.21
CCNE1-203ENST00000444983 FMO6PO60774 539 aa13.77□□□□□ -0.21
CCNE1-203ENST00000444983 CD46P15529 392 aa13.77□□□□□ -0.21
CCNE1-203ENST00000444983 MSX1P28360 303 aa13.77□□□□□ -0.21
CCNE1-203ENST00000444983 DNASE1L1P49184 302 aa13.77□□□□□ -0.21
CCNE1-203ENST00000444983 P2RX1P51575 399 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms