RNA–Protein interactions for RNA: ENST00000444867.1

SEMA3D-202, Transcript of semaphorin 3D, humanhuman

TSL 1 (best) BASIC

Gene SEMA3D, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-202ENST00000444867 RP1P56715 2156 aa17.41■□□□□ 0.38
SEMA3D-202ENST00000444867 LY6G6EA0A0G2JKS1 128 aa17.41■□□□□ 0.38
SEMA3D-202ENST00000444867 UNC119BA6NIH7 251 aa17.41■□□□□ 0.38
SEMA3D-202ENST00000444867 NTN1O95631 604 aa17.41■□□□□ 0.38
SEMA3D-202ENST00000444867 PTHP01270 115 aa17.41■□□□□ 0.38
SEMA3D-202ENST00000444867 HMGN1P05114 100 aa17.41■□□□□ 0.38
SEMA3D-202ENST00000444867 HOXD12P35452 270 aa17.41■□□□□ 0.38
SEMA3D-202ENST00000444867 ACAA2P42765 397 aaKnown RBP17.41■□□□□ 0.38
SEMA3D-202ENST00000444867 CTBP2P56545 445 aa17.41■□□□□ 0.38
SEMA3D-202ENST00000444867 CSTF1Q05048 431 aaKnown RBP17.41■□□□□ 0.38
SEMA3D-202ENST00000444867 MINDY4Q4G0A6 757 aa17.41■□□□□ 0.38
SEMA3D-202ENST00000444867 KLHL22Q53GT1 634 aa17.41■□□□□ 0.38
SEMA3D-202ENST00000444867 TMPRSS11FQ6ZWK6 438 aa17.41■□□□□ 0.38
SEMA3D-202ENST00000444867 SLC46A3Q7Z3Q1 461 aa17.41■□□□□ 0.38
SEMA3D-202ENST00000444867 SLITRK4Q8IW52 837 aa17.41■□□□□ 0.38
SEMA3D-202ENST00000444867 ZNF440Q8IYI8 595 aa17.41■□□□□ 0.38
SEMA3D-202ENST00000444867 NAT6Q93015 286 aa17.41■□□□□ 0.38
SEMA3D-202ENST00000444867 LRR1Q96L50 414 aa17.41■□□□□ 0.38
SEMA3D-202ENST00000444867 ZNF582Q96NG8 517 aaPredicted RBP17.41■□□□□ 0.38
SEMA3D-202ENST00000444867 MRPS18AQ9NVS2 196 aaKnown RBP17.41■□□□□ 0.38
SEMA3D-202ENST00000444867 SLC35A3Q9Y2D2 325 aa17.41■□□□□ 0.38
SEMA3D-202ENST00000444867 MED31Q9Y3C7 131 aa17.41■□□□□ 0.38
SEMA3D-202ENST00000444867 CLCA3PQ9Y6N3 262 aa17.41■□□□□ 0.38
SEMA3D-202ENST00000444867 U3KQA8 63 aa17.41■□□□□ 0.38
SEMA3D-202ENST00000444867 ASXL3Q9C0F0 2248 aa17.4■□□□□ 0.38
SEMA3D-202ENST00000444867 CPED1A4D0V7 1026 aa17.4■□□□□ 0.38
SEMA3D-202ENST00000444867 SERINC4A6NH21 518 aa17.4■□□□□ 0.38
SEMA3D-202ENST00000444867 EFCAB7A8K855 629 aa17.4■□□□□ 0.38
SEMA3D-202ENST00000444867 PRODHO43272 600 aa17.4■□□□□ 0.38
SEMA3D-202ENST00000444867 SIGLEC6O43699 453 aa17.4■□□□□ 0.38
SEMA3D-202ENST00000444867 IGKV3-11P04433 115 aa17.4■□□□□ 0.38
SEMA3D-202ENST00000444867 LCN1P31025 176 aa17.4■□□□□ 0.38
SEMA3D-202ENST00000444867 LIPAP38571 399 aa17.4■□□□□ 0.38
SEMA3D-202ENST00000444867 DCAF7P61962 342 aa17.4■□□□□ 0.38
SEMA3D-202ENST00000444867 PGGHGQ32M88 737 aa17.4■□□□□ 0.38
SEMA3D-202ENST00000444867 GUSBP11Q6P575 273 aa17.4■□□□□ 0.38
SEMA3D-202ENST00000444867 WDR88Q6ZMY6 472 aa17.4■□□□□ 0.38
SEMA3D-202ENST00000444867 RABEPKQ7Z6M1 372 aa17.4■□□□□ 0.38
SEMA3D-202ENST00000444867 OR4D9Q8NGE8 314 aa17.4■□□□□ 0.38
SEMA3D-202ENST00000444867 OR14A16Q8NHC5 309 aa17.4■□□□□ 0.38
SEMA3D-202ENST00000444867 TBC1D15Q8TC07 691 aa17.4■□□□□ 0.38
SEMA3D-202ENST00000444867 TSLPQ969D9 159 aa17.4■□□□□ 0.38
SEMA3D-202ENST00000444867 ZC3H10Q96K80 434 aaKnown RBP17.4■□□□□ 0.38
SEMA3D-202ENST00000444867 MRTO4Q9UKD2 239 aaKnown RBP17.4■□□□□ 0.38
SEMA3D-202ENST00000444867 DNAH14Q0VDD8 3507 aa17.4■□□□□ 0.38
SEMA3D-202ENST00000444867 CABIN1Q9Y6J0 2220 aa17.4■□□□□ 0.38
SEMA3D-202ENST00000444867 A0A1B0GWA3 101 aa17.39■□□□□ 0.38
SEMA3D-202ENST00000444867 FRG2CA6NGY1 282 aa17.39■□□□□ 0.38
SEMA3D-202ENST00000444867 KDM4EB2RXH2 506 aaPredicted RBP17.39■□□□□ 0.38
SEMA3D-202ENST00000444867 IFI30P13284 250 aa17.39■□□□□ 0.38
SEMA3D-202ENST00000444867 ADH7P40394 386 aa17.39■□□□□ 0.38
SEMA3D-202ENST00000444867 DCTN2Q13561 401 aaKnown RBP17.39■□□□□ 0.38
SEMA3D-202ENST00000444867 PERM1Q5SV97 790 aa17.39■□□□□ 0.38
SEMA3D-202ENST00000444867 RHBDD2Q6NTF9 364 aa17.39■□□□□ 0.38
SEMA3D-202ENST00000444867 ZNF574Q6ZN55 896 aaPredicted RBP17.39■□□□□ 0.38
SEMA3D-202ENST00000444867 LINC00299Q6ZSB3 139 aa17.39■□□□□ 0.38
SEMA3D-202ENST00000444867 ARHGAP22Q7Z5H3 698 aa17.39■□□□□ 0.38
SEMA3D-202ENST00000444867 ZNF527Q8NB42 609 aa17.39■□□□□ 0.38
SEMA3D-202ENST00000444867 ZSCAN1Q8NBB4 408 aa17.39■□□□□ 0.38
SEMA3D-202ENST00000444867 OR2T33Q8NG76 320 aa17.39■□□□□ 0.38
SEMA3D-202ENST00000444867 OR4Q3Q8NH05 313 aa17.39■□□□□ 0.38
SEMA3D-202ENST00000444867 SLC2A12Q8TD20 617 aa17.39■□□□□ 0.38
SEMA3D-202ENST00000444867 DAZLQ92904 295 aaKnown RBP17.39■□□□□ 0.38
SEMA3D-202ENST00000444867 SIDT1Q9NXL6 827 aaKnown RBP17.39■□□□□ 0.38
SEMA3D-202ENST00000444867 FLRT3Q9NZU0 649 aa17.39■□□□□ 0.38
SEMA3D-202ENST00000444867 DIMT1Q9UNQ2 313 aaKnown RBP17.39■□□□□ 0.38
SEMA3D-202ENST00000444867 ERGIC3Q9Y282 383 aa17.39■□□□□ 0.38
SEMA3D-202ENST00000444867 M0R3G1 203 aa17.39■□□□□ 0.37
SEMA3D-202ENST00000444867 SURF4O15260 269 aa17.39■□□□□ 0.37
SEMA3D-202ENST00000444867 CLPXO76031 633 aa17.39■□□□□ 0.37
SEMA3D-202ENST00000444867 RCBTB2O95199 551 aa17.39■□□□□ 0.37
SEMA3D-202ENST00000444867 RAB36O95755 333 aa17.39■□□□□ 0.37
SEMA3D-202ENST00000444867 IL33O95760 270 aa17.39■□□□□ 0.37
SEMA3D-202ENST00000444867 DDAH2O95865 285 aa17.39■□□□□ 0.37
SEMA3D-202ENST00000444867 CSTAP01040 98 aa17.39■□□□□ 0.37
SEMA3D-202ENST00000444867 NR4A1P22736 598 aa17.39■□□□□ 0.37
SEMA3D-202ENST00000444867 RNF144AP50876 292 aaPredicted RBP17.39■□□□□ 0.37
SEMA3D-202ENST00000444867 OCA2Q04671 838 aa17.39■□□□□ 0.37
SEMA3D-202ENST00000444867 CLPPQ16740 277 aaPredicted RBP17.39■□□□□ 0.37
SEMA3D-202ENST00000444867 ARMCX4Q5H9R4 360 aa17.39■□□□□ 0.37
SEMA3D-202ENST00000444867 PRAMEF17Q5VTA0 474 aa17.39■□□□□ 0.37
SEMA3D-202ENST00000444867 C1orf210Q8IVY1 113 aa17.39■□□□□ 0.37
SEMA3D-202ENST00000444867 MAML2Q8IZL2 1156 aaPredicted RBP17.39■□□□□ 0.37
SEMA3D-202ENST00000444867 SLC43A2Q8N370 569 aa17.39■□□□□ 0.37
SEMA3D-202ENST00000444867 PLPP5Q8NEB5 264 aa17.39■□□□□ 0.37
SEMA3D-202ENST00000444867 CEP76Q8TAP6 659 aa17.39■□□□□ 0.37
SEMA3D-202ENST00000444867 ZNF721Q8TF20 911 aa17.39■□□□□ 0.37
SEMA3D-202ENST00000444867 RFKQ969G6 155 aa17.39■□□□□ 0.37
SEMA3D-202ENST00000444867 PLEKHA8Q96JA3 519 aa17.39■□□□□ 0.37
SEMA3D-202ENST00000444867 LCORQ96JN0 433 aaPredicted RBP17.39■□□□□ 0.37
SEMA3D-202ENST00000444867 ZNF426Q9BUY5 554 aa17.39■□□□□ 0.37
SEMA3D-202ENST00000444867 MND1Q9BWT6 205 aa17.39■□□□□ 0.37
SEMA3D-202ENST00000444867 COL25A1Q9BXS0 654 aaPredicted RBP17.39■□□□□ 0.37
SEMA3D-202ENST00000444867 TGIF2Q9GZN2 237 aa17.39■□□□□ 0.37
SEMA3D-202ENST00000444867 GAREM1Q9H706 876 aa17.39■□□□□ 0.37
SEMA3D-202ENST00000444867 CDC42EP2O14613 210 aa17.38■□□□□ 0.37
SEMA3D-202ENST00000444867 GRK5P34947 590 aa17.38■□□□□ 0.37
SEMA3D-202ENST00000444867 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.38■□□□□ 0.37
SEMA3D-202ENST00000444867 RAB40BQ12829 278 aa17.38■□□□□ 0.37
SEMA3D-202ENST00000444867 NNATQ16517 81 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms