RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 MAELQ96JY0 434 aaKnown RBP13.12□□□□□ -0.31
SMARCA4-204ENST00000444061 TPK1Q9H3S4 243 aa13.12□□□□□ -0.31
SMARCA4-204ENST00000444061 PRAMEF25A6NGN4 478 aa13.12□□□□□ -0.31
SMARCA4-204ENST00000444061 NDUFB2O95178 105 aa13.12□□□□□ -0.31
SMARCA4-204ENST00000444061 IDUAP35475 653 aa13.12□□□□□ -0.31
SMARCA4-204ENST00000444061 CDKN2CP42773 168 aa13.12□□□□□ -0.31
SMARCA4-204ENST00000444061 ZFP69Q49AA0 526 aa13.12□□□□□ -0.31
SMARCA4-204ENST00000444061 FEVQ99581 238 aa13.12□□□□□ -0.31
SMARCA4-204ENST00000444061 DCAF13Q9NV06 445 aaKnown RBP13.12□□□□□ -0.31
SMARCA4-204ENST00000444061 NKX1-2Q9UD57 310 aaPredicted RBP13.12□□□□□ -0.31
SMARCA4-204ENST00000444061 NUP62P37198 522 aaPredicted RBP13.12□□□□□ -0.31
SMARCA4-204ENST00000444061 EEF1A1P68104 462 aaKnown RBP13.12□□□□□ -0.31
SMARCA4-204ENST00000444061 MEDAGQ5VYS4 303 aa13.12□□□□□ -0.31
SMARCA4-204ENST00000444061 KCTD18Q6PI47 426 aaPredicted RBP13.12□□□□□ -0.31
SMARCA4-204ENST00000444061 KCTD8Q6ZWB6 473 aa13.12□□□□□ -0.31
SMARCA4-204ENST00000444061 ZNF283Q8N7M2 679 aa13.12□□□□□ -0.31
SMARCA4-204ENST00000444061 C9orf43Q8TAL5 461 aaPredicted RBP13.12□□□□□ -0.31
SMARCA4-204ENST00000444061 PRRC1Q96M27 445 aa13.12□□□□□ -0.31
SMARCA4-204ENST00000444061 RDH12Q96NR8 316 aa13.12□□□□□ -0.31
SMARCA4-204ENST00000444061 PCOLCE2Q9UKZ9 415 aa13.12□□□□□ -0.31
SMARCA4-204ENST00000444061 BAIAP2Q9UQB8 552 aa13.12□□□□□ -0.31
SMARCA4-204ENST00000444061 CD22P20273 847 aa13.11□□□□□ -0.31
SMARCA4-204ENST00000444061 STAT5AP42229 794 aa13.11□□□□□ -0.31
SMARCA4-204ENST00000444061 CRISP1P54107 249 aa13.11□□□□□ -0.31
SMARCA4-204ENST00000444061 PRPS1P60891 318 aa13.11□□□□□ -0.31
SMARCA4-204ENST00000444061 RETREG3Q86VR2 466 aa13.11□□□□□ -0.31
SMARCA4-204ENST00000444061 CNEP1R1Q8N9A8 125 aa13.11□□□□□ -0.31
SMARCA4-204ENST00000444061 COQ8BQ96D53 544 aa13.11□□□□□ -0.31
SMARCA4-204ENST00000444061 DSN1Q9H410 356 aa13.11□□□□□ -0.31
SMARCA4-204ENST00000444061 TCF7L1Q9HCS4 588 aa13.11□□□□□ -0.31
SMARCA4-204ENST00000444061 CTSFQ9UBX1 484 aa13.11□□□□□ -0.31
SMARCA4-204ENST00000444061 RBM7Q9Y580 266 aaKnown RBP13.11□□□□□ -0.31
SMARCA4-204ENST00000444061 MYOFQ9NZM1 2061 aa13.11□□□□□ -0.31
SMARCA4-204ENST00000444061 GVINP1Q7Z2Y8 2422 aa13.11□□□□□ -0.31
SMARCA4-204ENST00000444061 LCTP09848 1927 aa13.11□□□□□ -0.31
SMARCA4-204ENST00000444061 EME2A4GXA9 379 aaPredicted RBP13.11□□□□□ -0.31
SMARCA4-204ENST00000444061 TTLL8A6PVC2 850 aa13.11□□□□□ -0.31
SMARCA4-204ENST00000444061 TMEM176BQ3YBM2 270 aaPredicted RBP13.11□□□□□ -0.31
SMARCA4-204ENST00000444061 TESQ9UGI8 421 aaKnown RBP13.11□□□□□ -0.31
SMARCA4-204ENST00000444061 CACNA1EQ15878 2313 aa13.11□□□□□ -0.31
SMARCA4-204ENST00000444061 RCVRNP35243 200 aa13.11□□□□□ -0.31
SMARCA4-204ENST00000444061 MAP3K8P41279 467 aa13.11□□□□□ -0.31
SMARCA4-204ENST00000444061 ALG10Q5BKT4 473 aa13.11□□□□□ -0.31
SMARCA4-204ENST00000444061 WDR74Q6RFH5 385 aaPredicted RBP13.11□□□□□ -0.31
SMARCA4-204ENST00000444061 FAM180AQ6UWF9 173 aa13.11□□□□□ -0.31
SMARCA4-204ENST00000444061 UNQ6126/PRO20091Q6UXV3 157 aa13.11□□□□□ -0.31
SMARCA4-204ENST00000444061 KLHDC8BQ8IXV7 354 aa13.11□□□□□ -0.31
SMARCA4-204ENST00000444061 STON2Q8WXE9 905 aa13.11□□□□□ -0.31
SMARCA4-204ENST00000444061 KAT8Q9H7Z6 458 aaKnown RBP13.11□□□□□ -0.31
SMARCA4-204ENST00000444061 AGPAT4Q9NRZ5 378 aa13.11□□□□□ -0.31
SMARCA4-204ENST00000444061 MBD1Q9UIS9 605 aaPredicted RBP13.11□□□□□ -0.31
SMARCA4-204ENST00000444061 ETHE1O95571 254 aa13.1□□□□□ -0.31
SMARCA4-204ENST00000444061 EDNRAP25101 427 aa13.1□□□□□ -0.31
SMARCA4-204ENST00000444061 PPP1CAP62136 330 aa13.1□□□□□ -0.31
SMARCA4-204ENST00000444061 KCNAB2Q13303 367 aa13.1□□□□□ -0.31
SMARCA4-204ENST00000444061 IL18R1Q13478 541 aa13.1□□□□□ -0.31
SMARCA4-204ENST00000444061 ZBED5Q49AG3 693 aa13.1□□□□□ -0.31
SMARCA4-204ENST00000444061 FAM199XQ6PEV8 388 aaPredicted RBP13.1□□□□□ -0.31
SMARCA4-204ENST00000444061 OR2T4Q8NH00 348 aa13.1□□□□□ -0.31
SMARCA4-204ENST00000444061 ADAMTS16Q8TE57 1224 aa13.1□□□□□ -0.31
SMARCA4-204ENST00000444061 DPH1Q9BZG8 443 aa13.1□□□□□ -0.31
SMARCA4-204ENST00000444061 DUSP22Q9NRW4 184 aa13.1□□□□□ -0.31
SMARCA4-204ENST00000444061 EMC3Q9P0I2 261 aa13.1□□□□□ -0.31
SMARCA4-204ENST00000444061 UNC13CQ8NB66 2214 aa13.1□□□□□ -0.31
SMARCA4-204ENST00000444061 H0YC42 278 aa13.1□□□□□ -0.31
SMARCA4-204ENST00000444061 SBK3P0C264 359 aa13.1□□□□□ -0.31
SMARCA4-204ENST00000444061 BICRALQ6AI39 1079 aa13.1□□□□□ -0.31
SMARCA4-204ENST00000444061 MAVSQ7Z434 540 aa13.1□□□□□ -0.31
SMARCA4-204ENST00000444061 FBXO27Q8NI29 283 aa13.1□□□□□ -0.31
SMARCA4-204ENST00000444061 FCGR1BQ92637 280 aa13.1□□□□□ -0.31
SMARCA4-204ENST00000444061 STACQ99469 402 aa13.1□□□□□ -0.31
SMARCA4-204ENST00000444061 YARS2Q9Y2Z4 477 aaKnown RBP13.1□□□□□ -0.31
SMARCA4-204ENST00000444061 J3QLW9 94 aa13.1□□□□□ -0.31
SMARCA4-204ENST00000444061 ZNF19P17023 458 aa13.1□□□□□ -0.31
SMARCA4-204ENST00000444061 YBX1P67809 324 aaKnown RBP13.1□□□□□ -0.31
SMARCA4-204ENST00000444061 SLC22A16Q86VW1 577 aa13.1□□□□□ -0.31
SMARCA4-204ENST00000444061 LRRC17Q8N6Y2 441 aa13.1□□□□□ -0.31
SMARCA4-204ENST00000444061 OR51G2Q8NGK0 314 aa13.1□□□□□ -0.31
SMARCA4-204ENST00000444061 HMGCLL1Q8TB92 370 aa13.1□□□□□ -0.31
SMARCA4-204ENST00000444061 RBM24Q9BX46 236 aaKnown RBP13.1□□□□□ -0.31
SMARCA4-204ENST00000444061 MYO16Q9Y6X6 1858 aa13.1□□□□□ -0.31
SMARCA4-204ENST00000444061 OR6C76A6NM76 312 aa13.1□□□□□ -0.31
SMARCA4-204ENST00000444061 ZNF891A8MT65 544 aaPredicted RBP13.1□□□□□ -0.31
SMARCA4-204ENST00000444061 ACOX3O15254 700 aa13.1□□□□□ -0.31
SMARCA4-204ENST00000444061 TPOP07202 933 aa13.1□□□□□ -0.31
SMARCA4-204ENST00000444061 TGFBR3Q03167 851 aa13.1□□□□□ -0.31
SMARCA4-204ENST00000444061 SLC14A1Q13336 389 aa13.1□□□□□ -0.31
SMARCA4-204ENST00000444061 OR1Q1Q15612 314 aa13.1□□□□□ -0.31
SMARCA4-204ENST00000444061 KRT74Q7RTS7 529 aa13.1□□□□□ -0.31
SMARCA4-204ENST00000444061 DGLUCYQ7Z3D6 616 aa13.1□□□□□ -0.31
SMARCA4-204ENST00000444061 OR52E2Q8NGJ4 325 aa13.1□□□□□ -0.31
SMARCA4-204ENST00000444061 OR8J1Q8NGP2 316 aa13.1□□□□□ -0.31
SMARCA4-204ENST00000444061 OR4K13Q8NH42 304 aa13.1□□□□□ -0.31
SMARCA4-204ENST00000444061 NANOS1Q8WY41 292 aaKnown RBP13.1□□□□□ -0.31
SMARCA4-204ENST00000444061 QRSL1Q9H0R6 528 aaKnown RBP13.1□□□□□ -0.31
SMARCA4-204ENST00000444061 LRFN1Q9P244 771 aa13.1□□□□□ -0.31
SMARCA4-204ENST00000444061 KLF13Q9Y2Y9 288 aaPredicted RBP13.1□□□□□ -0.31
SMARCA4-204ENST00000444061 MYO10Q9HD67 2058 aa13.1□□□□□ -0.31
SMARCA4-204ENST00000444061 ANXA2P2A6NMY6 339 aa13.09□□□□□ -0.31
SMARCA4-204ENST00000444061 PCDH17O14917 1159 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms