RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 MRPL3P09001 348 aaKnown RBP18.9■□□□□ 0.62
SHOX2-203ENST00000441443 GDNFP39905 211 aa18.9■□□□□ 0.62
SHOX2-203ENST00000441443 SLC16A1P53985 500 aa18.9■□□□□ 0.62
SHOX2-203ENST00000441443 KLF9Q13886 244 aaPredicted RBP18.9■□□□□ 0.62
SHOX2-203ENST00000441443 LASP1Q14847 261 aaKnown RBP18.9■□□□□ 0.62
SHOX2-203ENST00000441443 C17orf107Q6ZR85 190 aa18.9■□□□□ 0.62
SHOX2-203ENST00000441443 NRMQ8IXM6 262 aa18.9■□□□□ 0.62
SHOX2-203ENST00000441443 KRT78Q8N1N4 520 aa18.9■□□□□ 0.62
SHOX2-203ENST00000441443 AMER3Q8N944 861 aa18.9■□□□□ 0.62
SHOX2-203ENST00000441443 PIGXQ8TBF5 258 aa18.9■□□□□ 0.62
SHOX2-203ENST00000441443 OSTF1Q92882 214 aa18.9■□□□□ 0.62
SHOX2-203ENST00000441443 ZNF689Q96CS4 500 aaPredicted RBP18.9■□□□□ 0.62
SHOX2-203ENST00000441443 HCFC2Q9Y5Z7 792 aa18.9■□□□□ 0.62
SHOX2-203ENST00000441443 GLOD5A6NK44 160 aa18.9■□□□□ 0.62
SHOX2-203ENST00000441443 PRKRAO75569 313 aaKnown RBP18.9■□□□□ 0.62
SHOX2-203ENST00000441443 SHC2P98077 582 aa18.9■□□□□ 0.62
SHOX2-203ENST00000441443 TEAD2Q15562 447 aa18.9■□□□□ 0.62
SHOX2-203ENST00000441443 HSD17B12Q53GQ0 312 aa18.9■□□□□ 0.62
SHOX2-203ENST00000441443 VRK2Q86Y07 508 aa18.9■□□□□ 0.62
SHOX2-203ENST00000441443 ING5Q8WYH8 240 aa18.9■□□□□ 0.62
SHOX2-203ENST00000441443 CNOT9Q92600 299 aaKnown RBP18.9■□□□□ 0.62
SHOX2-203ENST00000441443 CD93Q9NPY3 652 aa18.9■□□□□ 0.62
SHOX2-203ENST00000441443 TRIM36Q9NQ86 728 aa18.9■□□□□ 0.62
SHOX2-203ENST00000441443 TBX21Q9UL17 535 aa18.9■□□□□ 0.62
SHOX2-203ENST00000441443 CEP290O15078 2479 aa18.89■□□□□ 0.62
SHOX2-203ENST00000441443 HIDE1A8MVS5 230 aa18.89■□□□□ 0.61
SHOX2-203ENST00000441443 TMPRSS11DO60235 418 aa18.89■□□□□ 0.61
SHOX2-203ENST00000441443 PLATP00750 562 aa18.89■□□□□ 0.61
SHOX2-203ENST00000441443 CTSAP10619 480 aa18.89■□□□□ 0.61
SHOX2-203ENST00000441443 ATF1P18846 271 aa18.89■□□□□ 0.61
SHOX2-203ENST00000441443 PRLHRP49683 370 aa18.89■□□□□ 0.61
SHOX2-203ENST00000441443 CCR8P51685 355 aa18.89■□□□□ 0.61
SHOX2-203ENST00000441443 TRAM2Q15035 370 aa18.89■□□□□ 0.61
SHOX2-203ENST00000441443 SLC25A25Q6KCM7 469 aa18.89■□□□□ 0.61
SHOX2-203ENST00000441443 LINC00518Q8N0U6 118 aa18.89■□□□□ 0.61
SHOX2-203ENST00000441443 OR9A1PQ8NGU1 263 aa18.89■□□□□ 0.61
SHOX2-203ENST00000441443 PTP4A1Q93096 173 aa18.89■□□□□ 0.61
SHOX2-203ENST00000441443 ARMC5Q96C12 935 aa18.89■□□□□ 0.61
SHOX2-203ENST00000441443 HCAR1Q9BXC0 346 aa18.89■□□□□ 0.61
SHOX2-203ENST00000441443 TEX12Q9BXU0 123 aa18.89■□□□□ 0.61
SHOX2-203ENST00000441443 TTTY10Q9BZA0 68 aa18.89■□□□□ 0.61
SHOX2-203ENST00000441443 AHSPQ9NZD4 102 aa18.89■□□□□ 0.61
SHOX2-203ENST00000441443 RCE1Q9Y256 329 aa18.89■□□□□ 0.61
SHOX2-203ENST00000441443 WNT6Q9Y6F9 365 aa18.89■□□□□ 0.61
SHOX2-203ENST00000441443 FEZF1A0PJY2 475 aa18.89■□□□□ 0.61
SHOX2-203ENST00000441443 CHURC1-FNTBB4DL54 471 aa18.89■□□□□ 0.61
SHOX2-203ENST00000441443 POP4O95707 220 aaKnown RBP18.89■□□□□ 0.61
SHOX2-203ENST00000441443 BSGP35613 385 aa18.89■□□□□ 0.61
SHOX2-203ENST00000441443 RAG2P55895 527 aa18.89■□□□□ 0.61
SHOX2-203ENST00000441443 OVCH2Q7RTZ1 564 aa18.89■□□□□ 0.61
SHOX2-203ENST00000441443 TRMT11Q7Z4G4 463 aaKnown RBP18.89■□□□□ 0.61
SHOX2-203ENST00000441443 ACTR6Q9GZN1 396 aa18.89■□□□□ 0.61
SHOX2-203ENST00000441443 LDAHQ9H6V9 325 aa18.89■□□□□ 0.61
SHOX2-203ENST00000441443 PLSCR5A0PG75 271 aa18.88■□□□□ 0.61
SHOX2-203ENST00000441443 J3QRE1 110 aa18.88■□□□□ 0.61
SHOX2-203ENST00000441443 RAB3BP20337 219 aa18.88■□□□□ 0.61
SHOX2-203ENST00000441443 RAD52P43351 418 aa18.88■□□□□ 0.61
SHOX2-203ENST00000441443 GCGRP47871 477 aa18.88■□□□□ 0.61
SHOX2-203ENST00000441443 HENMT1Q5T8I9 393 aaKnown RBP18.88■□□□□ 0.61
SHOX2-203ENST00000441443 KHDRBS2Q5VWX1 349 aaKnown RBP18.88■□□□□ 0.61
SHOX2-203ENST00000441443 SLC22A10Q63ZE4 541 aa18.88■□□□□ 0.61
SHOX2-203ENST00000441443 GET4Q7L5D6 327 aaPredicted RBP18.88■□□□□ 0.61
SHOX2-203ENST00000441443 GLIPR2Q9H4G4 154 aa18.88■□□□□ 0.61
SHOX2-203ENST00000441443 PIPOXQ9P0Z9 390 aa18.88■□□□□ 0.61
SHOX2-203ENST00000441443 TUBAL3A6NHL2 446 aa18.88■□□□□ 0.61
SHOX2-203ENST00000441443 KRBOX1C9JBD0 128 aa18.88■□□□□ 0.61
SHOX2-203ENST00000441443 PRR23D1E9PI22 279 aaPredicted RBP18.88■□□□□ 0.61
SHOX2-203ENST00000441443 CDC42EP2O14613 210 aa18.88■□□□□ 0.61
SHOX2-203ENST00000441443 PDCD5O14737 125 aa18.88■□□□□ 0.61
SHOX2-203ENST00000441443 ARPC1BO15143 372 aaKnown RBP18.88■□□□□ 0.61
SHOX2-203ENST00000441443 PPM1DO15297 605 aa18.88■□□□□ 0.61
SHOX2-203ENST00000441443 PRR23D2P0DMB1 279 aaPredicted RBP18.88■□□□□ 0.61
SHOX2-203ENST00000441443 TYRP14679 529 aa18.88■□□□□ 0.61
SHOX2-203ENST00000441443 FUT1P19526 365 aa18.88■□□□□ 0.61
SHOX2-203ENST00000441443 ZNF311Q5JNZ3 666 aa18.88■□□□□ 0.61
SHOX2-203ENST00000441443 LY6G5CQ5SRR4 150 aa18.88■□□□□ 0.61
SHOX2-203ENST00000441443 SHEQ5VZ18 495 aa18.88■□□□□ 0.61
SHOX2-203ENST00000441443 OR5M10Q6IEU7 315 aa18.88■□□□□ 0.61
SHOX2-203ENST00000441443 GDPD4Q6W3E5 623 aa18.88■□□□□ 0.61
SHOX2-203ENST00000441443 GANCQ8TET4 914 aa18.88■□□□□ 0.61
SHOX2-203ENST00000441443 GLYATL1Q969I3 302 aa18.88■□□□□ 0.61
SHOX2-203ENST00000441443 DMRTA2Q96SC8 542 aa18.88■□□□□ 0.61
SHOX2-203ENST00000441443 IL20Q9NYY1 176 aa18.88■□□□□ 0.61
SHOX2-203ENST00000441443 PFDN2Q9UHV9 154 aa18.88■□□□□ 0.61
SHOX2-203ENST00000441443 ACSL5Q9ULC5 683 aa18.88■□□□□ 0.61
SHOX2-203ENST00000441443 A8MXK9 166 aa18.87■□□□□ 0.61
SHOX2-203ENST00000441443 J3QLW9 94 aa18.87■□□□□ 0.61
SHOX2-203ENST00000441443 ADRB1P08588 477 aa18.87■□□□□ 0.61
SHOX2-203ENST00000441443 ZNF19P17023 458 aa18.87■□□□□ 0.61
SHOX2-203ENST00000441443 NFYAP23511 347 aaPredicted RBP18.87■□□□□ 0.61
SHOX2-203ENST00000441443 SLC7A9P82251 487 aa18.87■□□□□ 0.61
SHOX2-203ENST00000441443 PITPNAQ00169 270 aa18.87■□□□□ 0.61
SHOX2-203ENST00000441443 ACSM3Q53FZ2 586 aa18.87■□□□□ 0.61
SHOX2-203ENST00000441443 SEZ6L2Q6UXD5 910 aa18.87■□□□□ 0.61
SHOX2-203ENST00000441443 SLITRK4Q8IW52 837 aa18.87■□□□□ 0.61
SHOX2-203ENST00000441443 TRAM1L1Q8N609 369 aa18.87■□□□□ 0.61
SHOX2-203ENST00000441443 ANKRD53Q8N9V6 530 aa18.87■□□□□ 0.61
SHOX2-203ENST00000441443 TMEM255BQ8WV15 326 aa18.87■□□□□ 0.61
SHOX2-203ENST00000441443 C16orf58Q96GQ5 468 aa18.87■□□□□ 0.61
SHOX2-203ENST00000441443 SPATA5L1Q9BVQ7 753 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms