RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 GANCQ8TET4 914 aa15.68■□□□□ 0.1
PMS1-213ENST00000441310 GCDHQ92947 438 aaPredicted RBP15.68■□□□□ 0.1
PMS1-213ENST00000441310 TEFMQ96QE5 360 aaKnown RBP15.68■□□□□ 0.1
PMS1-213ENST00000441310 RSPO3Q9BXY4 272 aaPredicted RBP15.68■□□□□ 0.1
PMS1-213ENST00000441310 ACTR6Q9GZN1 396 aa15.68■□□□□ 0.1
PMS1-213ENST00000441310 TAS2R3Q9NYW6 316 aa15.68■□□□□ 0.1
PMS1-213ENST00000441310 TINAGQ9UJW2 476 aa15.68■□□□□ 0.1
PMS1-213ENST00000441310 ATG2BQ96BY7 2078 aa15.68■□□□□ 0.1
PMS1-213ENST00000441310 DENND4CQ5VZ89 1909 aa15.68■□□□□ 0.1
PMS1-213ENST00000441310 ANTXRLA6NF34 631 aa15.68■□□□□ 0.1
PMS1-213ENST00000441310 RNASET2O00584 256 aaKnown RBP15.68■□□□□ 0.1
PMS1-213ENST00000441310 ZNF806P0C7X5 589 aa15.68■□□□□ 0.1
PMS1-213ENST00000441310 ARAFP10398 606 aa15.68■□□□□ 0.1
PMS1-213ENST00000441310 VIPR2P41587 438 aa15.68■□□□□ 0.1
PMS1-213ENST00000441310 NSG1P42857 185 aa15.68■□□□□ 0.1
PMS1-213ENST00000441310 ASMTP46597 345 aa15.68■□□□□ 0.1
PMS1-213ENST00000441310 CDH11P55287 796 aa15.68■□□□□ 0.1
PMS1-213ENST00000441310 GDPD4Q6W3E5 623 aa15.68■□□□□ 0.1
PMS1-213ENST00000441310 BPIFCQ8NFQ6 507 aa15.68■□□□□ 0.1
PMS1-213ENST00000441310 OR51Q1Q8NH59 317 aa15.68■□□□□ 0.1
PMS1-213ENST00000441310 SPPL3Q8TCT6 385 aa15.68■□□□□ 0.1
PMS1-213ENST00000441310 ZDHHC3Q9NYG2 299 aa15.68■□□□□ 0.1
PMS1-213ENST00000441310 GULP1Q9UBP9 304 aa15.68■□□□□ 0.1
PMS1-213ENST00000441310 GRXCR1A8MXD5 290 aa15.67■□□□□ 0.1
PMS1-213ENST00000441310 RGS9O75916 674 aaPredicted RBP15.67■□□□□ 0.1
PMS1-213ENST00000441310 SPINT3P49223 89 aa15.67■□□□□ 0.1
PMS1-213ENST00000441310 METAP1P53582 386 aa15.67■□□□□ 0.1
PMS1-213ENST00000441310 SEC61A1P61619 476 aaKnown RBP15.67■□□□□ 0.1
PMS1-213ENST00000441310 RIPPLY1Q0D2K3 151 aa15.67■□□□□ 0.1
PMS1-213ENST00000441310 HMGN2P46Q86SG4 172 aa15.67■□□□□ 0.1
PMS1-213ENST00000441310 CBLN2Q8IUK8 224 aa15.67■□□□□ 0.1
PMS1-213ENST00000441310 OR11G2Q8NGC1 345 aa15.67■□□□□ 0.1
PMS1-213ENST00000441310 ADAT1Q9BUB4 502 aaKnown RBP15.67■□□□□ 0.1
PMS1-213ENST00000441310 ISG20L2Q9H9L3 353 aaKnown RBP15.67■□□□□ 0.1
PMS1-213ENST00000441310 DPP7Q9UHL4 492 aa15.67■□□□□ 0.1
PMS1-213ENST00000441310 CA5BQ9Y2D0 317 aa15.67■□□□□ 0.1
PMS1-213ENST00000441310 GPR31O00270 319 aa15.67■□□□□ 0.1
PMS1-213ENST00000441310 PPP3CBP16298 524 aa15.67■□□□□ 0.1
PMS1-213ENST00000441310 PVALBP20472 110 aaPredicted RBP15.67■□□□□ 0.1
PMS1-213ENST00000441310 CSNK1DP48730 415 aa15.67■□□□□ 0.1
PMS1-213ENST00000441310 RAG2P55895 527 aa15.67■□□□□ 0.1
PMS1-213ENST00000441310 SMAD2Q15796 467 aaKnown RBP15.67■□□□□ 0.1
PMS1-213ENST00000441310 MINDY4Q4G0A6 757 aa15.67■□□□□ 0.1
PMS1-213ENST00000441310 FAM74A1Q5RGS3 127 aa15.67■□□□□ 0.1
PMS1-213ENST00000441310 LRRN1Q6UXK5 716 aa15.67■□□□□ 0.1
PMS1-213ENST00000441310 MACC1Q6ZN28 852 aa15.67■□□□□ 0.1
PMS1-213ENST00000441310 CEBPBP17676 345 aa15.66■□□□□ 0.1
PMS1-213ENST00000441310 ACADLP28330 430 aa15.66■□□□□ 0.1
PMS1-213ENST00000441310 MTNR1BP49286 362 aa15.66■□□□□ 0.1
PMS1-213ENST00000441310 HTRA4P83105 476 aaPredicted RBP15.66■□□□□ 0.1
PMS1-213ENST00000441310 TMEM255AQ5JRV8 349 aa15.66■□□□□ 0.1
PMS1-213ENST00000441310 KRT78Q8N1N4 520 aa15.66■□□□□ 0.1
PMS1-213ENST00000441310 LILRA3Q8N6C8 439 aaPredicted RBP15.66■□□□□ 0.1
PMS1-213ENST00000441310 OR4K5Q8NGD3 323 aa15.66■□□□□ 0.1
PMS1-213ENST00000441310 RAB8BQ92930 207 aa15.66■□□□□ 0.1
PMS1-213ENST00000441310 CLP1Q92989 425 aaKnown RBP15.66■□□□□ 0.1
PMS1-213ENST00000441310 ECHDC3Q96DC8 303 aa15.66■□□□□ 0.1
PMS1-213ENST00000441310 TBX5Q99593 518 aa15.66■□□□□ 0.1
PMS1-213ENST00000441310 KCNK7Q9Y2U2 307 aa15.66■□□□□ 0.1
PMS1-213ENST00000441310 IRAK3Q9Y616 596 aa15.66■□□□□ 0.1
PMS1-213ENST00000441310 TRBV23-1A0A0A0MS06 115 aa15.66■□□□□ 0.1
PMS1-213ENST00000441310 PQLC2LA1A4F0 135 aa15.66■□□□□ 0.1
PMS1-213ENST00000441310 TMEM202A6NGA9 273 aa15.66■□□□□ 0.1
PMS1-213ENST00000441310 SAP18O00422 153 aaKnown RBP15.66■□□□□ 0.1
PMS1-213ENST00000441310 EIF3GO75821 320 aaKnown RBP eCLIP15.66■□□□□ 0.1
PMS1-213ENST00000441310 RASGRP1O95267 797 aa15.66■□□□□ 0.1
PMS1-213ENST00000441310 XPAP23025 273 aaPredicted RBP15.66■□□□□ 0.1
PMS1-213ENST00000441310 OR5M9Q8NGP3 310 aa15.66■□□□□ 0.1
PMS1-213ENST00000441310 C10orf90Q96M02 699 aa15.66■□□□□ 0.1
PMS1-213ENST00000441310 CRB3Q9BUF7 120 aa15.66■□□□□ 0.1
PMS1-213ENST00000441310 FAIM2Q9BWQ8 316 aa15.66■□□□□ 0.1
PMS1-213ENST00000441310 EXOSC3Q9NQT5 275 aaKnown RBP15.66■□□□□ 0.1
PMS1-213ENST00000441310 SEC14L3Q9UDX4 400 aa15.66■□□□□ 0.1
PMS1-213ENST00000441310 PRKAG2Q9UGJ0 569 aa15.66■□□□□ 0.1
PMS1-213ENST00000441310 RCE1Q9Y256 329 aa15.66■□□□□ 0.1
PMS1-213ENST00000441310 SIRT4Q9Y6E7 314 aaPredicted RBP15.66■□□□□ 0.1
PMS1-213ENST00000441310 IRGMA1A4Y4 181 aa15.66■□□□□ 0.1
PMS1-213ENST00000441310 E7EQ34 232 aa15.66■□□□□ 0.1
PMS1-213ENST00000441310 LRRN3E7EW58 273 aa15.66■□□□□ 0.1
PMS1-213ENST00000441310 CHST10O43529 356 aa15.66■□□□□ 0.1
PMS1-213ENST00000441310 RNF13O43567 381 aa15.66■□□□□ 0.1
PMS1-213ENST00000441310 PIP5K1CO60331 668 aa15.66■□□□□ 0.1
PMS1-213ENST00000441310 HPP00738 406 aa15.66■□□□□ 0.1
PMS1-213ENST00000441310 SNRPBP14678 240 aaKnown RBP15.66■□□□□ 0.1
PMS1-213ENST00000441310 PBLDP30039 288 aaPredicted RBP15.66■□□□□ 0.1
PMS1-213ENST00000441310 CTSCP53634 463 aa15.66■□□□□ 0.1
PMS1-213ENST00000441310 DHODHQ02127 395 aa15.66■□□□□ 0.1
PMS1-213ENST00000441310 TNFRSF17Q02223 184 aa15.66■□□□□ 0.1
PMS1-213ENST00000441310 REEP3Q6NUK4 255 aa15.66■□□□□ 0.1
PMS1-213ENST00000441310 HDDC3Q8N4P3 179 aa15.66■□□□□ 0.1
PMS1-213ENST00000441310 EIF4E3Q8N5X7 224 aaKnown RBP15.66■□□□□ 0.1
PMS1-213ENST00000441310 PXT1Q8NFP0 134 aa15.66■□□□□ 0.1
PMS1-213ENST00000441310 OR4D9Q8NGE8 314 aa15.66■□□□□ 0.1
PMS1-213ENST00000441310 OR10K1Q8NGX5 313 aa15.66■□□□□ 0.1
PMS1-213ENST00000441310 ORAI3Q9BRQ5 295 aa15.66■□□□□ 0.1
PMS1-213ENST00000441310 YIPF4Q9BSR8 244 aa15.66■□□□□ 0.1
PMS1-213ENST00000441310 RIOK2Q9BVS4 552 aaKnown RBP15.66■□□□□ 0.1
PMS1-213ENST00000441310 LRRN3Q9H3W5 708 aa15.66■□□□□ 0.1
PMS1-213ENST00000441310 SGK2Q9HBY8 427 aa15.66■□□□□ 0.1
PMS1-213ENST00000441310 ASB6Q9NWX5 421 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms