RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 ZNF593O00488 134 aaPredicted RBP7.98□□□□□ -1.13
HPS4-206ENST00000439453 SLC28A2O43868 658 aa7.98□□□□□ -1.13
HPS4-206ENST00000439453 DRD2P14416 443 aa7.98□□□□□ -1.13
HPS4-206ENST00000439453 UGT2B7P16662 529 aa7.98□□□□□ -1.13
HPS4-206ENST00000439453 SHC1P29353 583 aa7.98□□□□□ -1.13
HPS4-206ENST00000439453 NUBP1P53384 320 aa7.98□□□□□ -1.13
HPS4-206ENST00000439453 SEC13P55735 322 aa7.98□□□□□ -1.13
HPS4-206ENST00000439453 RAG2P55895 527 aa7.98□□□□□ -1.13
HPS4-206ENST00000439453 TSPAN5P62079 268 aa7.98□□□□□ -1.13
HPS4-206ENST00000439453 LMAN2Q12907 356 aa7.98□□□□□ -1.13
HPS4-206ENST00000439453 SLBPQ14493 270 aaKnown RBP eCLIP7.98□□□□□ -1.13
HPS4-206ENST00000439453 SMARCD3Q6STE5 483 aa7.98□□□□□ -1.13
HPS4-206ENST00000439453 ZNF322Q6U7Q0 402 aaPredicted RBP7.98□□□□□ -1.13
HPS4-206ENST00000439453 OVCH2Q7RTZ1 564 aa7.98□□□□□ -1.13
HPS4-206ENST00000439453 MRGPRX3Q96LB0 322 aa7.98□□□□□ -1.13
HPS4-206ENST00000439453 TMEM168Q9H0V1 697 aa7.98□□□□□ -1.13
HPS4-206ENST00000439453 BEX1Q9HBH7 125 aa7.98□□□□□ -1.13
HPS4-206ENST00000439453 IFT46Q9NQC8 304 aa7.98□□□□□ -1.13
HPS4-206ENST00000439453 GLS2Q9UI32 602 aa7.98□□□□□ -1.13
HPS4-206ENST00000439453 ICKQ9UPZ9 632 aa7.98□□□□□ -1.13
HPS4-206ENST00000439453 MRPS17Q9Y2R5 130 aaKnown RBP7.98□□□□□ -1.13
HPS4-206ENST00000439453 SPAG17Q6Q759 2223 aa7.98□□□□□ -1.13
HPS4-206ENST00000439453 HMGN4O00479 90 aa7.98□□□□□ -1.13
HPS4-206ENST00000439453 NUPL2O15504 423 aaKnown RBP7.98□□□□□ -1.13
HPS4-206ENST00000439453 IGSF6O95976 241 aa7.98□□□□□ -1.13
HPS4-206ENST00000439453 ACP5P13686 325 aa7.98□□□□□ -1.13
HPS4-206ENST00000439453 BLVRAP53004 296 aa7.98□□□□□ -1.13
HPS4-206ENST00000439453 STK11Q15831 433 aa7.98□□□□□ -1.13
HPS4-206ENST00000439453 CLEC12AQ5QGZ9 265 aa7.98□□□□□ -1.13
HPS4-206ENST00000439453 TSSK4Q6SA08 328 aa7.98□□□□□ -1.13
HPS4-206ENST00000439453 C3P1Q6ZMU1 363 aa7.98□□□□□ -1.13
HPS4-206ENST00000439453 LINC00518Q8N0U6 118 aa7.98□□□□□ -1.13
HPS4-206ENST00000439453 ZNF527Q8NB42 609 aa7.98□□□□□ -1.13
HPS4-206ENST00000439453 FIBINQ8TAL6 211 aa7.98□□□□□ -1.13
HPS4-206ENST00000439453 SORCS1Q8WY21 1168 aa7.98□□□□□ -1.13
HPS4-206ENST00000439453 PTP4A1Q93096 173 aa7.98□□□□□ -1.13
HPS4-206ENST00000439453 RFKQ969G6 155 aa7.98□□□□□ -1.13
HPS4-206ENST00000439453 YIPF5Q969M3 257 aa7.98□□□□□ -1.13
HPS4-206ENST00000439453 SFXN2Q96NB2 322 aa7.98□□□□□ -1.13
HPS4-206ENST00000439453 IER2Q9BTL4 223 aa7.98□□□□□ -1.13
HPS4-206ENST00000439453 CTPS2Q9NRF8 586 aa7.98□□□□□ -1.13
HPS4-206ENST00000439453 SH2B3Q9UQQ2 575 aa7.98□□□□□ -1.13
HPS4-206ENST00000439453 LIPT1Q9Y234 373 aa7.98□□□□□ -1.13
HPS4-206ENST00000439453 EXOGQ9Y2C4 368 aaKnown RBP7.98□□□□□ -1.13
HPS4-206ENST00000439453 SLC9A8Q9Y2E8 581 aa7.98□□□□□ -1.13
HPS4-206ENST00000439453 GOLGA4Q13439 2230 aaKnown RBP7.98□□□□□ -1.13
HPS4-206ENST00000439453 SLC22A23A1A5C7 686 aa7.98□□□□□ -1.13
HPS4-206ENST00000439453 MMP20O60882 483 aa7.98□□□□□ -1.13
HPS4-206ENST00000439453 FZD7O75084 574 aa7.98□□□□□ -1.13
HPS4-206ENST00000439453 IGHA1P01876 353 aa7.98□□□□□ -1.13
HPS4-206ENST00000439453 HPXP02790 462 aa7.98□□□□□ -1.13
HPS4-206ENST00000439453 CATP04040 527 aaKnown RBP7.98□□□□□ -1.13
HPS4-206ENST00000439453 EPHA4P54764 986 aa7.98□□□□□ -1.13
HPS4-206ENST00000439453 OR10A3P58181 314 aa7.98□□□□□ -1.13
HPS4-206ENST00000439453 CNTN1Q12860 1018 aa7.98□□□□□ -1.13
HPS4-206ENST00000439453 ZSWIM7Q19AV6 140 aa7.98□□□□□ -1.13
HPS4-206ENST00000439453 C2orf27AQ580R0 203 aa7.98□□□□□ -1.13
HPS4-206ENST00000439453 SHEQ5VZ18 495 aa7.98□□□□□ -1.13
HPS4-206ENST00000439453 RGS7BPQ6MZT1 257 aaPredicted RBP7.98□□□□□ -1.13
HPS4-206ENST00000439453 C6orf120Q7Z4R8 191 aa7.98□□□□□ -1.13
HPS4-206ENST00000439453 SPEM1Q8N4L4 309 aa7.98□□□□□ -1.13
HPS4-206ENST00000439453 TBC1D19Q8N5T2 526 aa7.98□□□□□ -1.13
HPS4-206ENST00000439453 TRMT10AQ8TBZ6 339 aaKnown RBP7.98□□□□□ -1.13
HPS4-206ENST00000439453 ECHDC3Q96DC8 303 aa7.98□□□□□ -1.13
HPS4-206ENST00000439453 BRD7Q9NPI1 651 aa7.98□□□□□ -1.13
HPS4-206ENST00000439453 SLAMF7Q9NQ25 335 aa7.98□□□□□ -1.13
HPS4-206ENST00000439453 NLGN3Q9NZ94 848 aa7.98□□□□□ -1.13
HPS4-206ENST00000439453 ACSL5Q9ULC5 683 aa7.98□□□□□ -1.13
HPS4-206ENST00000439453 DOCK9Q9BZ29 2069 aa7.98□□□□□ -1.13
HPS4-206ENST00000439453 OR2AG2A6NM03 316 aa7.97□□□□□ -1.13
HPS4-206ENST00000439453 KRBOX1C9JBD0 128 aa7.97□□□□□ -1.13
HPS4-206ENST00000439453 B4GALT2O60909 372 aa7.97□□□□□ -1.13
HPS4-206ENST00000439453 CH25HO95992 272 aa7.97□□□□□ -1.13
HPS4-206ENST00000439453 MT-ND4P03905 459 aa7.97□□□□□ -1.13
HPS4-206ENST00000439453 C4BPBP20851 252 aa7.97□□□□□ -1.13
HPS4-206ENST00000439453 ATP6V1E1P36543 226 aa7.97□□□□□ -1.13
HPS4-206ENST00000439453 CTSOP43234 321 aaPredicted RBP7.97□□□□□ -1.13
HPS4-206ENST00000439453 PREPP48147 710 aa7.97□□□□□ -1.13
HPS4-206ENST00000439453 SPINT3P49223 89 aa7.97□□□□□ -1.13
HPS4-206ENST00000439453 MANFP55145 182 aaKnown RBP7.97□□□□□ -1.13
HPS4-206ENST00000439453 SHC2P98077 582 aa7.97□□□□□ -1.13
HPS4-206ENST00000439453 DGCR2P98153 550 aa7.97□□□□□ -1.13
HPS4-206ENST00000439453 TCTE1Q5JU00 501 aa7.97□□□□□ -1.13
HPS4-206ENST00000439453 AADACL4Q5VUY2 407 aa7.97□□□□□ -1.13
HPS4-206ENST00000439453 SFXN4Q6P4A7 337 aa7.97□□□□□ -1.13
HPS4-206ENST00000439453 OR5P2Q8WZ92 322 aa7.97□□□□□ -1.13
HPS4-206ENST00000439453 SIPA1Q96FS4 1042 aa7.97□□□□□ -1.13
HPS4-206ENST00000439453 CXorf58Q96LI9 332 aa7.97□□□□□ -1.13
HPS4-206ENST00000439453 DDOQ99489 341 aa7.97□□□□□ -1.13
HPS4-206ENST00000439453 GABRG3Q99928 467 aa7.97□□□□□ -1.13
HPS4-206ENST00000439453 TREX2Q9BQ50 279 aaPredicted RBP7.97□□□□□ -1.13
HPS4-206ENST00000439453 SORBS1Q9BX66 1292 aaKnown RBP7.97□□□□□ -1.13
HPS4-206ENST00000439453 LDAHQ9H6V9 325 aa7.97□□□□□ -1.13
HPS4-206ENST00000439453 ISG20L2Q9H9L3 353 aaKnown RBP7.97□□□□□ -1.13
HPS4-206ENST00000439453 MED9Q9NWA0 146 aa7.97□□□□□ -1.13
HPS4-206ENST00000439453 OR6C2Q9NZP2 312 aa7.97□□□□□ -1.13
HPS4-206ENST00000439453 DEC1Q9P2X7 70 aa7.97□□□□□ -1.13
HPS4-206ENST00000439453 HRH3Q9Y5N1 445 aa7.97□□□□□ -1.13
HPS4-206ENST00000439453 PRR23D1E9PI22 279 aaPredicted RBP7.97□□□□□ -1.13
HPS4-206ENST00000439453 NPC1O15118 1278 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms