RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 TBC1D3FA6NER0 549 aaPredicted RBP15.24■□□□□ 0.03
CLCNKA-203ENST00000439316 UNC119BA6NIH7 251 aa15.24■□□□□ 0.03
CLCNKA-203ENST00000439316 RNGTTO60942 597 aaKnown RBP15.24■□□□□ 0.03
CLCNKA-203ENST00000439316 CHRNB1P11230 501 aa15.24■□□□□ 0.03
CLCNKA-203ENST00000439316 HOXB2P14652 356 aa15.24■□□□□ 0.03
CLCNKA-203ENST00000439316 DRD1P21728 446 aa15.24■□□□□ 0.03
CLCNKA-203ENST00000439316 C5AR1P21730 350 aa15.24■□□□□ 0.03
CLCNKA-203ENST00000439316 FXYD6P3P58550 94 aa15.24■□□□□ 0.03
CLCNKA-203ENST00000439316 RRAS2P62070 204 aaPredicted RBP15.24■□□□□ 0.03
CLCNKA-203ENST00000439316 EEF1A1P68104 462 aaKnown RBP15.24■□□□□ 0.03
CLCNKA-203ENST00000439316 BTN3A2P78410 334 aa15.24■□□□□ 0.03
CLCNKA-203ENST00000439316 ARHGAP11BQ3KRB8 267 aa15.24■□□□□ 0.03
CLCNKA-203ENST00000439316 TBC1D3GQ6DHY5 549 aa15.24■□□□□ 0.03
CLCNKA-203ENST00000439316 PLBD1Q6P4A8 553 aa15.24■□□□□ 0.03
CLCNKA-203ENST00000439316 LRRC25Q8N386 305 aaPredicted RBP15.24■□□□□ 0.03
CLCNKA-203ENST00000439316 TMEM99Q8N816 258 aa15.24■□□□□ 0.03
CLCNKA-203ENST00000439316 OR5M3Q8NGP4 307 aa15.24■□□□□ 0.03
CLCNKA-203ENST00000439316 GAL3ST3Q96A11 431 aa15.24■□□□□ 0.03
CLCNKA-203ENST00000439316 CREB3L1Q96BA8 519 aa15.24■□□□□ 0.03
CLCNKA-203ENST00000439316 OR52D1Q9H346 318 aa15.24■□□□□ 0.03
CLCNKA-203ENST00000439316 RMI1Q9H9A7 625 aa15.24■□□□□ 0.03
CLCNKA-203ENST00000439316 BABAM2Q9NXR7 383 aa15.24■□□□□ 0.03
CLCNKA-203ENST00000439316 ING3Q9NXR8 418 aa15.24■□□□□ 0.03
CLCNKA-203ENST00000439316 SLC17A4Q9Y2C5 497 aa15.24■□□□□ 0.03
CLCNKA-203ENST00000439316 WDR45Q9Y484 360 aa15.24■□□□□ 0.03
CLCNKA-203ENST00000439316 A0A0G2JMP0 313 aa15.23■□□□□ 0.03
CLCNKA-203ENST00000439316 A0A0X1KG70 313 aa15.23■□□□□ 0.03
CLCNKA-203ENST00000439316 KCNJ13O60928 360 aa15.23■□□□□ 0.03
CLCNKA-203ENST00000439316 ZNF780AO75290 641 aaPredicted RBP15.23■□□□□ 0.03
CLCNKA-203ENST00000439316 PAK4O96013 591 aaPredicted RBP15.23■□□□□ 0.03
CLCNKA-203ENST00000439316 COL9A1P20849 921 aa15.23■□□□□ 0.03
CLCNKA-203ENST00000439316 AGFG1P52594 562 aaKnown RBP15.23■□□□□ 0.03
CLCNKA-203ENST00000439316 CSTF1Q05048 431 aaKnown RBP15.23■□□□□ 0.03
CLCNKA-203ENST00000439316 RPE65Q16518 533 aa15.23■□□□□ 0.03
CLCNKA-203ENST00000439316 EIPR1Q53HC9 387 aa15.23■□□□□ 0.03
CLCNKA-203ENST00000439316 TJAP1Q5JTD0 557 aa15.23■□□□□ 0.03
CLCNKA-203ENST00000439316 IDNKQ5T6J7 187 aa15.23■□□□□ 0.03
CLCNKA-203ENST00000439316 ZNF776Q68DI1 518 aaPredicted RBP15.23■□□□□ 0.03
CLCNKA-203ENST00000439316 B3GLCTQ6Y288 498 aa15.23■□□□□ 0.03
CLCNKA-203ENST00000439316 MEPCEQ7L2J0 689 aaKnown RBP15.23■□□□□ 0.03
CLCNKA-203ENST00000439316 VN1R4Q7Z5H5 301 aa15.23■□□□□ 0.03
CLCNKA-203ENST00000439316 LRRC28Q86X40 367 aaPredicted RBP15.23■□□□□ 0.03
CLCNKA-203ENST00000439316 OR4M2Q8NGB6 313 aa15.23■□□□□ 0.03
CLCNKA-203ENST00000439316 FANK1Q8TC84 345 aa15.23■□□□□ 0.03
CLCNKA-203ENST00000439316 KISS1RQ969F8 398 aaPredicted RBP15.23■□□□□ 0.03
CLCNKA-203ENST00000439316 WACQ9BTA9 647 aa15.23■□□□□ 0.03
CLCNKA-203ENST00000439316 GTPBP2Q9BX10 602 aaKnown RBP15.23■□□□□ 0.03
CLCNKA-203ENST00000439316 CACYBPQ9HB71 228 aaKnown RBP15.23■□□□□ 0.03
CLCNKA-203ENST00000439316 CYSLTR2Q9NS75 346 aa15.23■□□□□ 0.03
CLCNKA-203ENST00000439316 CENPVL1A0A0U1RR11 272 aa15.22■□□□□ 0.03
CLCNKA-203ENST00000439316 A0A1W2PQF6 199 aa15.22■□□□□ 0.03
CLCNKA-203ENST00000439316 INMT-MINDY4F8WBC2 141 aa15.22■□□□□ 0.03
CLCNKA-203ENST00000439316 BHLHE40O14503 412 aa15.22■□□□□ 0.03
CLCNKA-203ENST00000439316 CPNE3O75131 537 aaKnown RBP15.22■□□□□ 0.03
CLCNKA-203ENST00000439316 THBS1P07996 1170 aa15.22■□□□□ 0.03
CLCNKA-203ENST00000439316 PTNP21246 168 aa15.22■□□□□ 0.03
CLCNKA-203ENST00000439316 PAICSP22234 425 aaKnown RBP15.22■□□□□ 0.03
CLCNKA-203ENST00000439316 THBS2P35442 1172 aa15.22■□□□□ 0.03
CLCNKA-203ENST00000439316 CLDN2P57739 230 aa15.22■□□□□ 0.03
CLCNKA-203ENST00000439316 GNG2P59768 71 aa15.22■□□□□ 0.03
CLCNKA-203ENST00000439316 TNFRSF17Q02223 184 aa15.22■□□□□ 0.03
CLCNKA-203ENST00000439316 ZNF57Q68EA5 555 aaPredicted RBP15.22■□□□□ 0.03
CLCNKA-203ENST00000439316 PAQR7Q86WK9 346 aa15.22■□□□□ 0.03
CLCNKA-203ENST00000439316 OR2L13Q8N349 312 aa15.22■□□□□ 0.03
CLCNKA-203ENST00000439316 KCT2Q8NC54 265 aa15.22■□□□□ 0.03
CLCNKA-203ENST00000439316 ZFPM2Q8WW38 1151 aa15.22■□□□□ 0.03
CLCNKA-203ENST00000439316 HLA-CQ95604 372 aa15.22■□□□□ 0.03
CLCNKA-203ENST00000439316 KCTD12Q96CX2 325 aaKnown RBP15.22■□□□□ 0.03
CLCNKA-203ENST00000439316 DPH1Q9BZG8 443 aa15.22■□□□□ 0.03
CLCNKA-203ENST00000439316 MCUBQ9NWR8 336 aa15.22■□□□□ 0.03
CLCNKA-203ENST00000439316 ZC3H12DA2A288 527 aaKnown RBP15.22■□□□□ 0.03
CLCNKA-203ENST00000439316 TRAPPC13A5PLN9 417 aa15.22■□□□□ 0.03
CLCNKA-203ENST00000439316 HRO43593 1189 aa15.22■□□□□ 0.03
CLCNKA-203ENST00000439316 CD53P19397 219 aa15.22■□□□□ 0.03
CLCNKA-203ENST00000439316 SLC6A1P30531 599 aa15.22■□□□□ 0.03
CLCNKA-203ENST00000439316 BTG1P62324 171 aa15.22■□□□□ 0.03
CLCNKA-203ENST00000439316 SHC2P98077 582 aa15.22■□□□□ 0.03
CLCNKA-203ENST00000439316 DUSP8Q13202 625 aa15.22■□□□□ 0.03
CLCNKA-203ENST00000439316 GPR176Q14439 515 aa15.22■□□□□ 0.03
CLCNKA-203ENST00000439316 SMAD2Q15796 467 aaKnown RBP15.22■□□□□ 0.03
CLCNKA-203ENST00000439316 DUSP5Q16690 384 aa15.22■□□□□ 0.03
CLCNKA-203ENST00000439316 WDR88Q6ZMY6 472 aa15.22■□□□□ 0.03
CLCNKA-203ENST00000439316 RANBP3LQ86VV4 465 aaPredicted RBP15.22■□□□□ 0.03
CLCNKA-203ENST00000439316 OR52L1Q8NGH7 329 aa15.22■□□□□ 0.03
CLCNKA-203ENST00000439316 AHCYL2Q96HN2 611 aaKnown RBP15.22■□□□□ 0.03
CLCNKA-203ENST00000439316 KIR3DX1Q9H7L2 352 aa15.22■□□□□ 0.03
CLCNKA-203ENST00000439316 MED20Q9H944 212 aa15.22■□□□□ 0.03
CLCNKA-203ENST00000439316 GALNT9Q9HCQ5 603 aa15.22■□□□□ 0.03
CLCNKA-203ENST00000439316 TRIM36Q9NQ86 728 aa15.22■□□□□ 0.03
CLCNKA-203ENST00000439316 SIDT1Q9NXL6 827 aaKnown RBP15.22■□□□□ 0.03
CLCNKA-203ENST00000439316 SHISA7A6NL88 538 aa15.21■□□□□ 0.03
CLCNKA-203ENST00000439316 ERVH48-1M5A8F1 160 aa15.21■□□□□ 0.03
CLCNKA-203ENST00000439316 ARHGEF9O43307 516 aa15.21■□□□□ 0.03
CLCNKA-203ENST00000439316 LYPD3O95274 346 aa15.21■□□□□ 0.03
CLCNKA-203ENST00000439316 ZNF888P0CJ79 500 aaPredicted RBP15.21■□□□□ 0.03
CLCNKA-203ENST00000439316 MAKP20794 623 aa15.21■□□□□ 0.03
CLCNKA-203ENST00000439316 TBXA2RP21731 343 aa15.21■□□□□ 0.03
CLCNKA-203ENST00000439316 RPS4Y1P22090 263 aaKnown RBP15.21■□□□□ 0.03
CLCNKA-203ENST00000439316 HTR2AP28223 471 aa15.21■□□□□ 0.03
CLCNKA-203ENST00000439316 ATP12AP54707 1039 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms