RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 ENTPD4Q9Y227 616 aa2.58□□□□□ -2
HMGB3P12-201ENST00000438745 MRPS2Q9Y399 296 aaKnown RBP2.58□□□□□ -2
HMGB3P12-201ENST00000438745 F8P00451 2351 aa2.58□□□□□ -2
HMGB3P12-201ENST00000438745 ZFHX3Q15911 3703 aa2.57□□□□□ -2
HMGB3P12-201ENST00000438745 SPG11Q96JI7 2443 aa2.57□□□□□ -2
HMGB3P12-201ENST00000438745 DENND4AQ7Z401 1863 aa2.57□□□□□ -2
HMGB3P12-201ENST00000438745 IGHV3-16A0A0C4DH30 117 aa2.57□□□□□ -2
HMGB3P12-201ENST00000438745 TRBV2A0A0J9YWF9 115 aa2.57□□□□□ -2
HMGB3P12-201ENST00000438745 A0A0U1RRA0 63 aa2.57□□□□□ -2
HMGB3P12-201ENST00000438745 TMEM89A2RUT3 159 aa2.57□□□□□ -2
HMGB3P12-201ENST00000438745 CHEK1O14757 476 aa2.57□□□□□ -2
HMGB3P12-201ENST00000438745 ECI2O75521 394 aa2.57□□□□□ -2
HMGB3P12-201ENST00000438745 APBB3O95704 486 aa2.57□□□□□ -2
HMGB3P12-201ENST00000438745 NDUFB10O96000 172 aa2.57□□□□□ -2
HMGB3P12-201ENST00000438745 IGHG3P01860 377 aa2.57□□□□□ -2
HMGB3P12-201ENST00000438745 FCER2P06734 321 aa2.57□□□□□ -2
HMGB3P12-201ENST00000438745 HCKP08631 526 aa2.57□□□□□ -2
HMGB3P12-201ENST00000438745 FCGR3AP08637 254 aa2.57□□□□□ -2
HMGB3P12-201ENST00000438745 HSD17B1P14061 328 aa2.57□□□□□ -2
HMGB3P12-201ENST00000438745 STMN1P16949 149 aa2.57□□□□□ -2
HMGB3P12-201ENST00000438745 AHCYP23526 432 aa2.57□□□□□ -2
HMGB3P12-201ENST00000438745 ADORA1P30542 326 aa2.57□□□□□ -2
HMGB3P12-201ENST00000438745 CCL11P51671 97 aa2.57□□□□□ -2
HMGB3P12-201ENST00000438745 ZNF131P52739 623 aa2.57□□□□□ -2
HMGB3P12-201ENST00000438745 NTHL1P78549 312 aa2.57□□□□□ -2
HMGB3P12-201ENST00000438745 CRMP1Q14194 572 aa2.57□□□□□ -2
HMGB3P12-201ENST00000438745 PDK1Q15118 436 aa2.57□□□□□ -2
HMGB3P12-201ENST00000438745 FAM182AQ5T1J6 154 aa2.57□□□□□ -2
HMGB3P12-201ENST00000438745 C1orf189Q5VU69 101 aa2.57□□□□□ -2
HMGB3P12-201ENST00000438745 LIPKQ5VXJ0 399 aa2.57□□□□□ -2
HMGB3P12-201ENST00000438745 WDR25Q64LD2 544 aaPredicted RBP2.57□□□□□ -2
HMGB3P12-201ENST00000438745 OR6B2Q6IFH4 312 aa2.57□□□□□ -2
HMGB3P12-201ENST00000438745 ARMCX5Q6P1M9 558 aa2.57□□□□□ -2
HMGB3P12-201ENST00000438745 LUZP1Q86V48 1076 aa2.57□□□□□ -2
HMGB3P12-201ENST00000438745 RDH11Q8TC12 318 aa2.57□□□□□ -2
HMGB3P12-201ENST00000438745 ING5Q8WYH8 240 aa2.57□□□□□ -2
HMGB3P12-201ENST00000438745 ZNF707Q96C28 371 aaPredicted RBP2.57□□□□□ -2
HMGB3P12-201ENST00000438745 SPAG8Q99932 426 aaPredicted RBP2.57□□□□□ -2
HMGB3P12-201ENST00000438745 RBM24Q9BX46 236 aaKnown RBP2.57□□□□□ -2
HMGB3P12-201ENST00000438745 NLNQ9BYT8 704 aa2.57□□□□□ -2
HMGB3P12-201ENST00000438745 NT5C3AQ9H0P0 336 aa2.57□□□□□ -2
HMGB3P12-201ENST00000438745 SIRPDQ9H106 197 aa2.57□□□□□ -2
HMGB3P12-201ENST00000438745 HPS4Q9NQG7 708 aa2.57□□□□□ -2
HMGB3P12-201ENST00000438745 STARD5Q9NSY2 213 aa2.57□□□□□ -2
HMGB3P12-201ENST00000438745 ANO10Q9NW15 660 aa2.57□□□□□ -2
HMGB3P12-201ENST00000438745 RCOR3Q9P2K3 495 aaPredicted RBP2.57□□□□□ -2
HMGB3P12-201ENST00000438745 SEC14L4Q9UDX3 406 aa2.57□□□□□ -2
HMGB3P12-201ENST00000438745 GINS2Q9Y248 185 aa2.57□□□□□ -2
HMGB3P12-201ENST00000438745 SLC9A8Q9Y2E8 581 aa2.57□□□□□ -2
HMGB3P12-201ENST00000438745 RPH3AQ9Y2J0 694 aaPredicted RBP2.57□□□□□ -2
HMGB3P12-201ENST00000438745 ATG4BQ9Y4P1 393 aa2.57□□□□□ -2
HMGB3P12-201ENST00000438745 MCM3APO60318 1980 aa2.57□□□□□ -2
HMGB3P12-201ENST00000438745 SDK1Q7Z5N4 2213 aa2.57□□□□□ -2
HMGB3P12-201ENST00000438745 MUC22E2RYF6 1773 aaPredicted RBP2.56□□□□□ -2
HMGB3P12-201ENST00000438745 SIPA1L1O43166 1804 aa2.56□□□□□ -2
HMGB3P12-201ENST00000438745 NF1P21359 2839 aa2.56□□□□□ -2
HMGB3P12-201ENST00000438745 MYH13Q9UKX3 1938 aa2.56□□□□□ -2
HMGB3P12-201ENST00000438745 FER1L5A0AVI2 2057 aa2.56□□□□□ -2
HMGB3P12-201ENST00000438745 AHCTF1Q8WYP5 2266 aa2.56□□□□□ -2
HMGB3P12-201ENST00000438745 NBPF19A0A087WUL8 3843 aa2.56□□□□□ -2
HMGB3P12-201ENST00000438745 NME2P1O60361 137 aa2.56□□□□□ -2
HMGB3P12-201ENST00000438745 TSPAN2O60636 221 aa2.56□□□□□ -2
HMGB3P12-201ENST00000438745 VENTXO95231 258 aa2.56□□□□□ -2
HMGB3P12-201ENST00000438745 HPP00738 406 aa2.56□□□□□ -2
HMGB3P12-201ENST00000438745 RENP00797 406 aa2.56□□□□□ -2
HMGB3P12-201ENST00000438745 OAS1P00973 400 aaKnown RBP2.56□□□□□ -2
HMGB3P12-201ENST00000438745 SERPINF2P08697 491 aa2.56□□□□□ -2
HMGB3P12-201ENST00000438745 HIST1H2AGP0C0S8 130 aaPredicted RBP2.56□□□□□ -2
HMGB3P12-201ENST00000438745 CCDC159P0C7I6 412 aa2.56□□□□□ -2
HMGB3P12-201ENST00000438745 ZCCHC18P0CG32 403 aa2.56□□□□□ -2
HMGB3P12-201ENST00000438745 DNAH10OSP0CZ25 163 aa2.56□□□□□ -2
HMGB3P12-201ENST00000438745 FOLR2P14207 255 aa2.56□□□□□ -2
HMGB3P12-201ENST00000438745 BCL3P20749 454 aa2.56□□□□□ -2
HMGB3P12-201ENST00000438745 BCKDHBP21953 392 aa2.56□□□□□ -2
HMGB3P12-201ENST00000438745 FCARP24071 287 aa2.56□□□□□ -2
HMGB3P12-201ENST00000438745 UCP1P25874 307 aa2.56□□□□□ -2
HMGB3P12-201ENST00000438745 PRDX6P30041 224 aa2.56□□□□□ -2
HMGB3P12-201ENST00000438745 PPP2R1BP30154 601 aa2.56□□□□□ -2
HMGB3P12-201ENST00000438745 SFNP31947 248 aa2.56□□□□□ -2
HMGB3P12-201ENST00000438745 MATKP42679 507 aa2.56□□□□□ -2
HMGB3P12-201ENST00000438745 NPY2RP49146 381 aa2.56□□□□□ -2
HMGB3P12-201ENST00000438745 SLC7A2P52569 658 aa2.56□□□□□ -2
HMGB3P12-201ENST00000438745 SLC12A3P55017 1021 aa2.56□□□□□ -2
HMGB3P12-201ENST00000438745 MRPS6P82932 125 aaKnown RBP2.56□□□□□ -2
HMGB3P12-201ENST00000438745 CDKL1Q00532 357 aa2.56□□□□□ -2
HMGB3P12-201ENST00000438745 MGAT3Q09327 533 aa2.56□□□□□ -2
HMGB3P12-201ENST00000438745 ABRAXAS2Q15018 415 aa2.56□□□□□ -2
HMGB3P12-201ENST00000438745 PON2Q15165 354 aa2.56□□□□□ -2
HMGB3P12-201ENST00000438745 ZKSCAN8Q15776 578 aaPredicted RBP2.56□□□□□ -2
HMGB3P12-201ENST00000438745 HKDC1Q2TB90 917 aa2.56□□□□□ -2
HMGB3P12-201ENST00000438745 CNPY1Q3B7I2 92 aa2.56□□□□□ -2
HMGB3P12-201ENST00000438745 NHLRC3Q5JS37 347 aa2.56□□□□□ -2
HMGB3P12-201ENST00000438745 ZNF506Q5JVG8 444 aa2.56□□□□□ -2
HMGB3P12-201ENST00000438745 LIN9Q5TKA1 542 aa2.56□□□□□ -2
HMGB3P12-201ENST00000438745 PLBD1Q6P4A8 553 aa2.56□□□□□ -2
HMGB3P12-201ENST00000438745 RFWD3Q6PCD5 774 aa2.56□□□□□ -2
HMGB3P12-201ENST00000438745 C1orf186Q6ZWK4 172 aa2.56□□□□□ -2
HMGB3P12-201ENST00000438745 TMUB2Q71RG4 321 aa2.56□□□□□ -2
HMGB3P12-201ENST00000438745 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.56□□□□□ -2
HMGB3P12-201ENST00000438745 PYROXD2Q8N2H3 581 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms