RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 NOP16Q9Y3C1 178 aaKnown RBP6.26□□□□□ -1.41
CSDE1-205ENST00000438362 TMEM14AQ9Y6G1 99 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 F5P12259 2224 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 NPIPA5A0A0B4J1W7 369 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 METTL21EPA6NDL7 271 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 C5orf51A6NDU8 294 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 PCP4L1A6NKN8 68 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 OR2AT4A6NND4 320 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 NPIPA7E9PJI5 369 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 PRAF2O60831 178 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 KCNK2O95069 426 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 LGI1O95970 557 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 S100A9P06702 114 aaKnown RBP6.26□□□□□ -1.41
CSDE1-205ENST00000438362 NPIPA8P0DM63 369 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 CPEP16870 476 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 CEBPBP17676 345 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 FPR3P25089 353 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 SHC1P29353 583 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 RBMS1P29558 406 aaKnown RBP6.26□□□□□ -1.41
CSDE1-205ENST00000438362 ADH7P40394 386 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 ETV6P41212 452 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 ZFP36L2P47974 494 aaKnown RBP6.26□□□□□ -1.41
CSDE1-205ENST00000438362 MTNR1BP49286 362 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 SMCO1Q147U7 214 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 MBOAT2Q6ZWT7 520 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 ALG14Q96F25 216 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 INSM2Q96T92 566 aaPredicted RBP6.26□□□□□ -1.41
CSDE1-205ENST00000438362 GALNT9Q9HCQ5 603 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 NANSQ9NR45 359 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 PRTFDC1Q9NRG1 225 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 PTTG3PQ9NZH4 202 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 ABRACLQ9P1F3 81 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 DNMT3BQ9UBC3 853 aaKnown RBP6.26□□□□□ -1.41
CSDE1-205ENST00000438362 MSRAQ9UJ68 235 aa6.26□□□□□ -1.41
CSDE1-205ENST00000438362 NAP1L6A6NFF2 107 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 B4DGG1 531 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 SOCS6O14544 535 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 GAPDHSO14556 408 aaPredicted RBP6.25□□□□□ -1.41
CSDE1-205ENST00000438362 FZD7O75084 574 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 PRKRAO75569 313 aaKnown RBP6.25□□□□□ -1.41
CSDE1-205ENST00000438362 CDC123O75794 336 aaPredicted RBP6.25□□□□□ -1.41
CSDE1-205ENST00000438362 OR7A10O76100 309 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 RNH1P13489 461 aaKnown RBP6.25□□□□□ -1.41
CSDE1-205ENST00000438362 SLC6A11P48066 632 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 RACK1P63244 317 aaKnown RBP6.25□□□□□ -1.41
CSDE1-205ENST00000438362 CSNK1G2P78368 415 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 E2F1Q01094 437 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 OR1Q1Q15612 314 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 BAK1Q16611 211 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 KLHL26Q53HC5 615 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 PRICKLE2Q7Z3G6 844 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 COMMD7Q86VX2 200 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 MRPL43Q8N983 215 aaKnown RBP6.25□□□□□ -1.41
CSDE1-205ENST00000438362 BEST4Q8NFU0 473 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 OR8S1Q8NH09 359 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 GOT1L1Q8NHS2 421 aaPredicted RBP6.25□□□□□ -1.41
CSDE1-205ENST00000438362 CREB3L4Q8TEY5 395 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 ADAMTS14Q8WXS8 1223 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 POTEKPQ9BYX7 375 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 SRRQ9GZT4 340 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 ANKRD19PQ9H560 264 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 MED20Q9H944 212 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 INIPQ9NRY2 104 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 SIDT1Q9NXL6 827 aaKnown RBP6.25□□□□□ -1.41
CSDE1-205ENST00000438362 OR6C2Q9NZP2 312 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 PRODH2Q9UF12 536 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 IER3IP1Q9Y5U9 82 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 SERTM1A2A2V5 107 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 TRIM64A6NGJ6 449 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 B4DXG7 233 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 FABP7O15540 132 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 TFP02787 698 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 VAMP1P23763 118 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 PTBP1P26599 531 aaKnown RBP eCLIP6.25□□□□□ -1.414e-9■■■■■ 37.3
CSDE1-205ENST00000438362 PRKAR1BP31321 381 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 IRS1P35568 1242 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 DUSP6Q16828 381 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 DCST2Q5T1A1 773 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 GARNL3Q5VVW2 1013 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 GLT8D1Q68CQ7 371 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 C18orf63Q68DL7 685 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 MTFR2Q6P444 385 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 SLC35F2Q8IXU6 374 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 ARMC10Q8N2F6 343 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 SDR9C7Q8NEX9 313 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 APH1BQ8WW43 257 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 PMEPA1Q969W9 287 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 ELMOD3Q96FG2 381 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 ZFYVE21Q9BQ24 234 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 TIMM29Q9BSF4 260 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 KATNB1Q9BVA0 655 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 ATG4BQ9Y4P1 393 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 TRAV27A0A087WT01 109 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 K7ESM1 405 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 TMPRSS11DO60235 418 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 ALX3O95076 343 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 CSF3P09919 207 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 HLA-DMAP28067 261 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 TGM4P49221 684 aa6.25□□□□□ -1.41
CSDE1-205ENST00000438362 LIM2P55344 173 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms