RNA–Protein interactions for RNA: ENST00000438146.6

RBFOX2-209, Transcript of RNA binding fox-1 homolog 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RBFOX2, Length 1,356 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX2-209ENST00000438146 ZNF41P51814 821 aaPredicted RBP21.59■■□□□ 1.05
RBFOX2-209ENST00000438146 MMEL1Q495T6 779 aa21.59■■□□□ 1.05
RBFOX2-209ENST00000438146 RUNDC3AQ59EK9 446 aa21.59■■□□□ 1.05
RBFOX2-209ENST00000438146 RTL6Q6ICC9 239 aa21.59■■□□□ 1.05
RBFOX2-209ENST00000438146 MTDHQ86UE4 582 aaKnown RBP21.59■■□□□ 1.05
RBFOX2-209ENST00000438146 ULK2Q8IYT8 1036 aa21.59■■□□□ 1.05
RBFOX2-209ENST00000438146 POU5F2Q8N7G0 328 aa21.59■■□□□ 1.05
RBFOX2-209ENST00000438146 CGREF1Q99674 301 aa21.59■■□□□ 1.05
RBFOX2-209ENST00000438146 HHATLQ9HCP6 504 aa21.59■■□□□ 1.05
RBFOX2-209ENST00000438146 ICAM5Q9UMF0 924 aa21.59■■□□□ 1.05
RBFOX2-209ENST00000438146 DNAJC13O75165 2243 aa21.58■■□□□ 1.05
RBFOX2-209ENST00000438146 TMEM247A6NEH6 219 aa21.58■■□□□ 1.04
RBFOX2-209ENST00000438146 WIPF3A6NGB9 483 aa21.58■■□□□ 1.04
RBFOX2-209ENST00000438146 EVPLLA8MZ36 301 aa21.58■■□□□ 1.04
RBFOX2-209ENST00000438146 KDM4EB2RXH2 506 aaPredicted RBP21.58■■□□□ 1.04
RBFOX2-209ENST00000438146 FAM47E-STBD1D6RA91 191 aa21.58■■□□□ 1.04
RBFOX2-209ENST00000438146 H3BML4 177 aa21.58■■□□□ 1.04
RBFOX2-209ENST00000438146 SNX3O60493 162 aa21.58■■□□□ 1.04
RBFOX2-209ENST00000438146 CCDC22O60826 627 aa21.58■■□□□ 1.04
RBFOX2-209ENST00000438146 WDR1O75083 606 aa21.58■■□□□ 1.04
RBFOX2-209ENST00000438146 PPIBP23284 216 aaKnown RBP21.58■■□□□ 1.04
RBFOX2-209ENST00000438146 P2RX1P51575 399 aa21.58■■□□□ 1.04
RBFOX2-209ENST00000438146 CRISP3P54108 245 aa21.58■■□□□ 1.04
RBFOX2-209ENST00000438146 MTPNP58546 118 aa21.58■■□□□ 1.04
RBFOX2-209ENST00000438146 PMPCAQ10713 525 aa21.58■■□□□ 1.04
RBFOX2-209ENST00000438146 FADDQ13158 208 aa21.58■■□□□ 1.04
RBFOX2-209ENST00000438146 SELPLGQ14242 412 aa21.58■■□□□ 1.04
RBFOX2-209ENST00000438146 FGFBP1Q14512 234 aa21.58■■□□□ 1.04
RBFOX2-209ENST00000438146 MAPRE2Q15555 327 aa21.58■■□□□ 1.04
RBFOX2-209ENST00000438146 GCNT6Q5T4J0 391 aa21.58■■□□□ 1.04
RBFOX2-209ENST00000438146 C1orf185Q5T7R7 199 aa21.58■■□□□ 1.04
RBFOX2-209ENST00000438146 REP15Q6BDI9 236 aa21.58■■□□□ 1.04
RBFOX2-209ENST00000438146 ENPP6Q6UWR7 440 aa21.58■■□□□ 1.04
RBFOX2-209ENST00000438146 RPTNQ6XPR3 784 aa21.58■■□□□ 1.04
RBFOX2-209ENST00000438146 EIF3MQ7L2H7 374 aaKnown RBP21.58■■□□□ 1.04
RBFOX2-209ENST00000438146 EID3Q8N140 333 aa21.58■■□□□ 1.04
RBFOX2-209ENST00000438146 SMPDL3BQ92485 455 aa21.58■■□□□ 1.04
RBFOX2-209ENST00000438146 SLC39A3Q9BRY0 314 aa21.58■■□□□ 1.04
RBFOX2-209ENST00000438146 PRDM14Q9GZV8 571 aa21.58■■□□□ 1.04
RBFOX2-209ENST00000438146 MTHFD2LQ9H903 347 aaPredicted RBP21.58■■□□□ 1.04
RBFOX2-209ENST00000438146 THUMPD1Q9NXG2 353 aaKnown RBP21.58■■□□□ 1.04
RBFOX2-209ENST00000438146 ZNF337Q9Y3M9 751 aa21.58■■□□□ 1.04
RBFOX2-209ENST00000438146 GTF3C1Q12789 2109 aa21.58■■□□□ 1.04
RBFOX2-209ENST00000438146 USP9XQ93008 2570 aaPredicted RBP21.57■■□□□ 1.04
RBFOX2-209ENST00000438146 AGAP5A6NIR3 686 aa21.57■■□□□ 1.04
RBFOX2-209ENST00000438146 POU3F2P20265 443 aaPredicted RBP21.57■■□□□ 1.04
RBFOX2-209ENST00000438146 CHMP24386 653 aa21.57■■□□□ 1.04
RBFOX2-209ENST00000438146 LHX2P50458 406 aa21.57■■□□□ 1.04
RBFOX2-209ENST00000438146 TOMM34Q15785 309 aaPredicted RBP21.57■■□□□ 1.04
RBFOX2-209ENST00000438146 PLPPR5Q32ZL2 321 aa21.57■■□□□ 1.04
RBFOX2-209ENST00000438146 MTFR2Q6P444 385 aa21.57■■□□□ 1.04
RBFOX2-209ENST00000438146 B3GNT6Q6ZMB0 384 aa21.57■■□□□ 1.04
RBFOX2-209ENST00000438146 MRGPRGQ86SM5 289 aa21.57■■□□□ 1.04
RBFOX2-209ENST00000438146 UBQLNLQ8IYU4 475 aa21.57■■□□□ 1.04
RBFOX2-209ENST00000438146 ANKRD27Q96NW4 1050 aa21.57■■□□□ 1.04
RBFOX2-209ENST00000438146 TREX2Q9BQ50 279 aaPredicted RBP21.57■■□□□ 1.04
RBFOX2-209ENST00000438146 PIGQQ9BRB3 760 aa21.57■■□□□ 1.04
RBFOX2-209ENST00000438146 THUMPD3Q9BV44 507 aaKnown RBP21.57■■□□□ 1.04
RBFOX2-209ENST00000438146 A4GALTQ9NPC4 353 aa21.57■■□□□ 1.04
RBFOX2-209ENST00000438146 COL12A1Q99715 3063 aa21.56■■□□□ 1.04
RBFOX2-209ENST00000438146 H0Y3Z8 333 aa21.56■■□□□ 1.04
RBFOX2-209ENST00000438146 MRASO14807 208 aa21.56■■□□□ 1.04
RBFOX2-209ENST00000438146 BMP2P12643 396 aa21.56■■□□□ 1.04
RBFOX2-209ENST00000438146 GABRA1P14867 456 aa21.56■■□□□ 1.04
RBFOX2-209ENST00000438146 NUP107P57740 925 aa21.56■■□□□ 1.04
RBFOX2-209ENST00000438146 SKP2Q13309 424 aa21.56■■□□□ 1.04
RBFOX2-209ENST00000438146 CYLC2Q14093 348 aaPredicted RBP21.56■■□□□ 1.04
RBFOX2-209ENST00000438146 PM20D2Q8IYS1 436 aa21.56■■□□□ 1.04
RBFOX2-209ENST00000438146 NFKBIDQ8NI38 313 aa21.56■■□□□ 1.04
RBFOX2-209ENST00000438146 WDR60Q8WVS4 1066 aa21.56■■□□□ 1.04
RBFOX2-209ENST00000438146 ZNF524Q96C55 264 aa21.56■■□□□ 1.04
RBFOX2-209ENST00000438146 RNF145Q96MT1 663 aa21.56■■□□□ 1.04
RBFOX2-209ENST00000438146 TTYH2Q9BSA4 534 aa21.56■■□□□ 1.04
RBFOX2-209ENST00000438146 ST6GALNAC1Q9NSC7 600 aaPredicted RBP21.56■■□□□ 1.04
RBFOX2-209ENST00000438146 CALML5Q9NZT1 146 aa21.56■■□□□ 1.04
RBFOX2-209ENST00000438146 CORO2BQ9UQ03 480 aa21.56■■□□□ 1.04
RBFOX2-209ENST00000438146 A0A087WZY1 265 aa21.55■■□□□ 1.04
RBFOX2-209ENST00000438146 C5orf58C9J3I9 102 aa21.55■■□□□ 1.04
RBFOX2-209ENST00000438146 H0YC42 278 aa21.55■■□□□ 1.04
RBFOX2-209ENST00000438146 SEC14L5O43304 696 aa21.55■■□□□ 1.04
RBFOX2-209ENST00000438146 EIF4E2O60573 245 aaKnown RBP21.55■■□□□ 1.04
RBFOX2-209ENST00000438146 OPN1LWP04000 364 aa21.55■■□□□ 1.04
RBFOX2-209ENST00000438146 GLI4P10075 376 aa21.55■■□□□ 1.04
RBFOX2-209ENST00000438146 IL7RP16871 459 aa21.55■■□□□ 1.04
RBFOX2-209ENST00000438146 GPX2P18283 190 aa21.55■■□□□ 1.04
RBFOX2-209ENST00000438146 ADSLP30566 484 aaPredicted RBP21.55■■□□□ 1.04
RBFOX2-209ENST00000438146 PGM1P36871 562 aa21.55■■□□□ 1.04
RBFOX2-209ENST00000438146 TPD52P55327 224 aaPredicted RBP21.55■■□□□ 1.04
RBFOX2-209ENST00000438146 CLDN18P56856 261 aa21.55■■□□□ 1.04
RBFOX2-209ENST00000438146 KCNJ10P78508 379 aa21.55■■□□□ 1.04
RBFOX2-209ENST00000438146 FOXF1Q12946 379 aa21.55■■□□□ 1.04
RBFOX2-209ENST00000438146 TRMT5Q32P41 509 aaKnown RBP21.55■■□□□ 1.04
RBFOX2-209ENST00000438146 GLYR1Q49A26 553 aaPredicted RBP21.55■■□□□ 1.04
RBFOX2-209ENST00000438146 ACSF3Q4G176 576 aaPredicted RBP21.55■■□□□ 1.04
RBFOX2-209ENST00000438146 AP1ARQ63HQ0 302 aa21.55■■□□□ 1.04
RBFOX2-209ENST00000438146 PLXDC2Q6UX71 529 aa21.55■■□□□ 1.04
RBFOX2-209ENST00000438146 VRK2Q86Y07 508 aa21.55■■□□□ 1.04
RBFOX2-209ENST00000438146 TOR1AIP2Q8NFQ8 470 aa21.55■■□□□ 1.04
RBFOX2-209ENST00000438146 OR52P1PQ8NH57 321 aa21.55■■□□□ 1.04
RBFOX2-209ENST00000438146 OR5W2Q8NH69 310 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms