RNA–Protein interactions for RNA: ENST00000435354.1

LINC01006-204, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

TSL 2 BASIC

Gene LINC01006, Length 545 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-204ENST00000435354 KLHL4Q9C0H6 718 aa12.85□□□□□ -0.35
LINC01006-204ENST00000435354 GPATCH2Q9NW75 528 aa12.85□□□□□ -0.35
LINC01006-204ENST00000435354 PAQR5Q9NXK6 330 aaPredicted RBP12.85□□□□□ -0.35
LINC01006-204ENST00000435354 GIN1Q9NXP7 522 aa12.85□□□□□ -0.35
LINC01006-204ENST00000435354 ZDHHC2Q9UIJ5 367 aa12.85□□□□□ -0.35
LINC01006-204ENST00000435354 EMC9Q9Y3B6 208 aa12.85□□□□□ -0.35
LINC01006-204ENST00000435354 KCNE3Q9Y6H6 103 aa12.85□□□□□ -0.35
LINC01006-204ENST00000435354 FREM1Q5H8C1 2179 aa12.85□□□□□ -0.35
LINC01006-204ENST00000435354 NPIPB9F8W1W9 429 aa12.84□□□□□ -0.35
LINC01006-204ENST00000435354 EFNA2O43921 213 aa12.84□□□□□ -0.35
LINC01006-204ENST00000435354 SKAP2O75563 359 aaPredicted RBP12.84□□□□□ -0.35
LINC01006-204ENST00000435354 HSPA4LO95757 839 aa12.84□□□□□ -0.35
LINC01006-204ENST00000435354 C6orf47O95873 294 aa12.84□□□□□ -0.35
LINC01006-204ENST00000435354 PLGP00747 810 aaPredicted RBP12.84□□□□□ -0.35
LINC01006-204ENST00000435354 DDX5P17844 614 aaKnown RBP12.84□□□□□ -0.35
LINC01006-204ENST00000435354 SERPINB5P36952 375 aa12.84□□□□□ -0.35
LINC01006-204ENST00000435354 RPL3P39023 403 aaKnown RBP12.84□□□□□ -0.35
LINC01006-204ENST00000435354 CTBP2P56545 445 aa12.84□□□□□ -0.35
LINC01006-204ENST00000435354 FOXF1Q12946 379 aa12.84□□□□□ -0.35
LINC01006-204ENST00000435354 TP53BP2Q13625 1128 aa12.84□□□□□ -0.35
LINC01006-204ENST00000435354 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.84□□□□□ -0.35
LINC01006-204ENST00000435354 HBMQ6B0K9 141 aa12.84□□□□□ -0.35
LINC01006-204ENST00000435354 CBLN3Q6UW01 205 aa12.84□□□□□ -0.35
LINC01006-204ENST00000435354 STAC2Q6ZMT1 411 aa12.84□□□□□ -0.35
LINC01006-204ENST00000435354 LILRA2Q8N149 483 aa12.84□□□□□ -0.35
LINC01006-204ENST00000435354 AENQ8WTP8 325 aaKnown RBP12.84□□□□□ -0.35
LINC01006-204ENST00000435354 ZNF524Q96C55 264 aa12.84□□□□□ -0.35
LINC01006-204ENST00000435354 CHMP6Q96FZ7 201 aa12.84□□□□□ -0.35
LINC01006-204ENST00000435354 PIP5K1AQ99755 562 aa12.84□□□□□ -0.35
LINC01006-204ENST00000435354 ACTRT3Q9BYD9 372 aa12.84□□□□□ -0.35
LINC01006-204ENST00000435354 UBTD1Q9HAC8 227 aa12.84□□□□□ -0.35
LINC01006-204ENST00000435354 MCTS1Q9ULC4 181 aaKnown RBP12.84□□□□□ -0.35
LINC01006-204ENST00000435354 ICAM5Q9UMF0 924 aa12.84□□□□□ -0.35
LINC01006-204ENST00000435354 TYROBPO43914 113 aa12.83□□□□□ -0.36
LINC01006-204ENST00000435354 LYPLA1O75608 230 aaPredicted RBP12.83□□□□□ -0.36
LINC01006-204ENST00000435354 SYNGR4O95473 234 aa12.83□□□□□ -0.36
LINC01006-204ENST00000435354 BPGMP07738 259 aa12.83□□□□□ -0.36
LINC01006-204ENST00000435354 ME2P23368 584 aa12.83□□□□□ -0.36
LINC01006-204ENST00000435354 ETV4P43268 484 aa12.83□□□□□ -0.36
LINC01006-204ENST00000435354 IFFO1Q0D2I5 559 aa12.83□□□□□ -0.36
LINC01006-204ENST00000435354 ACKR1Q16570 336 aa12.83□□□□□ -0.36
LINC01006-204ENST00000435354 NDUFAF6Q330K2 333 aa12.83□□□□□ -0.36
LINC01006-204ENST00000435354 DCST2Q5T1A1 773 aa12.83□□□□□ -0.36
LINC01006-204ENST00000435354 SHEQ5VZ18 495 aa12.83□□□□□ -0.36
LINC01006-204ENST00000435354 MTERF4Q7Z6M4 381 aaKnown RBP12.83□□□□□ -0.36
LINC01006-204ENST00000435354 BIVMQ86UB2 503 aa12.83□□□□□ -0.36
LINC01006-204ENST00000435354 FNDC5Q8NAU1 212 aa12.83□□□□□ -0.36
LINC01006-204ENST00000435354 OR56A1Q8NGH5 318 aa12.83□□□□□ -0.36
LINC01006-204ENST00000435354 PHOSPHO1Q8TCT1 267 aa12.83□□□□□ -0.36
LINC01006-204ENST00000435354 OSTF1Q92882 214 aa12.83□□□□□ -0.36
LINC01006-204ENST00000435354 C18orf12Q96KH6 178 aa12.83□□□□□ -0.36
LINC01006-204ENST00000435354 KLHL15Q96M94 604 aa12.83□□□□□ -0.36
LINC01006-204ENST00000435354 ROPN1BQ9BZX4 212 aaPredicted RBP12.83□□□□□ -0.36
LINC01006-204ENST00000435354 ROPN1Q9HAT0 212 aaPredicted RBP12.83□□□□□ -0.36
LINC01006-204ENST00000435354 ATAD3AQ9NVI7 634 aa12.83□□□□□ -0.36
LINC01006-204ENST00000435354 CARD8Q9Y2G2 431 aa12.83□□□□□ -0.36
LINC01006-204ENST00000435354 NSD1Q96L73 2696 aaPredicted RBP12.83□□□□□ -0.36
LINC01006-204ENST00000435354 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.82□□□□□ -0.36
LINC01006-204ENST00000435354 KLF4O43474 513 aa12.82□□□□□ -0.36
LINC01006-204ENST00000435354 SMPD2O60906 423 aa12.82□□□□□ -0.36
LINC01006-204ENST00000435354 G6PDP11413 515 aa12.82□□□□□ -0.36
LINC01006-204ENST00000435354 PRPS1L1P21108 318 aa12.82□□□□□ -0.36
LINC01006-204ENST00000435354 ATP6V1C1P21283 382 aa12.82□□□□□ -0.36
LINC01006-204ENST00000435354 ELK4P28324 431 aa12.82□□□□□ -0.36
LINC01006-204ENST00000435354 AGTR1P30556 359 aa12.82□□□□□ -0.36
LINC01006-204ENST00000435354 SFTPDP35247 375 aa12.82□□□□□ -0.36
LINC01006-204ENST00000435354 EIF1P41567 113 aaKnown RBP12.82□□□□□ -0.36
LINC01006-204ENST00000435354 CARD18P57730 90 aa12.82□□□□□ -0.36
LINC01006-204ENST00000435354 C21orf58P58505 322 aa12.82□□□□□ -0.36
LINC01006-204ENST00000435354 HBA1P69905 142 aa12.82□□□□□ -0.36
LINC01006-204ENST00000435354 TOMM34Q15785 309 aaPredicted RBP12.82□□□□□ -0.36
LINC01006-204ENST00000435354 ZNF239Q16600 458 aaKnown RBP12.82□□□□□ -0.36
LINC01006-204ENST00000435354 LSM12Q3MHD2 195 aaKnown RBP12.82□□□□□ -0.36
LINC01006-204ENST00000435354 SPDYE7PQ495Y7 208 aa12.82□□□□□ -0.36
LINC01006-204ENST00000435354 Q5PR19 223 aa12.82□□□□□ -0.36
LINC01006-204ENST00000435354 LRRC75A-AS1Q8N1F1 130 aa12.82□□□□□ -0.36
LINC01006-204ENST00000435354 OR5AK3PQ8NH89 298 aa12.82□□□□□ -0.36
LINC01006-204ENST00000435354 FBXO27Q8NI29 283 aa12.82□□□□□ -0.36
LINC01006-204ENST00000435354 PPP1R14CQ8TAE6 165 aa12.82□□□□□ -0.36
LINC01006-204ENST00000435354 SFXN5Q8TD22 340 aa12.82□□□□□ -0.36
LINC01006-204ENST00000435354 ADAMTS15Q8TE58 950 aa12.82□□□□□ -0.36
LINC01006-204ENST00000435354 RNF128Q8TEB7 428 aa12.82□□□□□ -0.36
LINC01006-204ENST00000435354 ABHD3Q8WU67 409 aa12.82□□□□□ -0.36
LINC01006-204ENST00000435354 ROBO4Q8WZ75 1007 aa12.82□□□□□ -0.36
LINC01006-204ENST00000435354 PIGTQ969N2 578 aa12.82□□□□□ -0.36
LINC01006-204ENST00000435354 TUBGCP3Q96CW5 907 aa12.82□□□□□ -0.36
LINC01006-204ENST00000435354 OR7D2Q96RA2 312 aa12.82□□□□□ -0.36
LINC01006-204ENST00000435354 SRXN1Q9BYN0 137 aa12.82□□□□□ -0.36
LINC01006-204ENST00000435354 HOXD1Q9GZZ0 328 aa12.82□□□□□ -0.36
LINC01006-204ENST00000435354 SERHL2Q9H4I8 314 aa12.82□□□□□ -0.36
LINC01006-204ENST00000435354 ZNF395Q9H8N7 513 aaPredicted RBP12.82□□□□□ -0.36
LINC01006-204ENST00000435354 GLRX2Q9NS18 164 aa12.82□□□□□ -0.36
LINC01006-204ENST00000435354 FAF1Q9UNN5 650 aaPredicted RBP12.82□□□□□ -0.36
LINC01006-204ENST00000435354 ACTL7BQ9Y614 415 aa12.82□□□□□ -0.36
LINC01006-204ENST00000435354 USF3Q68DE3 2245 aa12.82□□□□□ -0.36
LINC01006-204ENST00000435354 FN1P02751 2386 aaKnown RBP12.81□□□□□ -0.36
LINC01006-204ENST00000435354 ZNF195O14628 629 aa12.81□□□□□ -0.36
LINC01006-204ENST00000435354 ITM2AO43736 263 aa12.81□□□□□ -0.36
LINC01006-204ENST00000435354 NTN1O95631 604 aa12.81□□□□□ -0.36
LINC01006-204ENST00000435354 TUBBP07437 444 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms