RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 HCRTR2O43614 444 aa16.62■□□□□ 0.25
HLA-F-220ENST00000434407 EIF4E2O60573 245 aaKnown RBP16.62■□□□□ 0.25
HLA-F-220ENST00000434407 DNAJA2O60884 412 aa16.62■□□□□ 0.25
HLA-F-220ENST00000434407 SNRPB2P08579 225 aaKnown RBP16.62■□□□□ 0.25
HLA-F-220ENST00000434407 TFPTP0C1Z6 253 aa16.62■□□□□ 0.25
HLA-F-220ENST00000434407 RPS4Y1P22090 263 aaKnown RBP16.62■□□□□ 0.25
HLA-F-220ENST00000434407 ADSLP30566 484 aaPredicted RBP16.62■□□□□ 0.25
HLA-F-220ENST00000434407 CRATP43155 626 aa16.62■□□□□ 0.25
HLA-F-220ENST00000434407 SUMO3P55854 103 aaPredicted RBP16.62■□□□□ 0.25
HLA-F-220ENST00000434407 DSTNP60981 165 aa16.62■□□□□ 0.25
HLA-F-220ENST00000434407 SF3A3Q12874 501 aaKnown RBP eCLIP16.62■□□□□ 0.25
HLA-F-220ENST00000434407 PLPPR5Q32ZL2 321 aa16.62■□□□□ 0.25
HLA-F-220ENST00000434407 GPAT3Q53EU6 434 aa16.62■□□□□ 0.25
HLA-F-220ENST00000434407 C1orf185Q5T7R7 199 aa16.62■□□□□ 0.25
HLA-F-220ENST00000434407 XKRXQ6PP77 449 aa16.62■□□□□ 0.25
HLA-F-220ENST00000434407 CBLN3Q6UW01 205 aa16.62■□□□□ 0.25
HLA-F-220ENST00000434407 B3GNT6Q6ZMB0 384 aa16.62■□□□□ 0.25
HLA-F-220ENST00000434407 ADGRE4PQ86SQ3 457 aa16.62■□□□□ 0.25
HLA-F-220ENST00000434407 FAM71CQ8NEG0 241 aa16.62■□□□□ 0.25
HLA-F-220ENST00000434407 TOR1AIP2Q8NFQ8 470 aa16.62■□□□□ 0.25
HLA-F-220ENST00000434407 ZPLD1Q8TCW7 415 aa16.62■□□□□ 0.25
HLA-F-220ENST00000434407 SH3YL1Q96HL8 342 aaPredicted RBP16.62■□□□□ 0.25
HLA-F-220ENST00000434407 PIGQQ9BRB3 760 aa16.62■□□□□ 0.25
HLA-F-220ENST00000434407 RUBCNLQ9H714 662 aa16.62■□□□□ 0.25
HLA-F-220ENST00000434407 MED17Q9NVC6 651 aa16.62■□□□□ 0.25
HLA-F-220ENST00000434407 P2RX2Q9UBL9 471 aa16.62■□□□□ 0.25
HLA-F-220ENST00000434407 RPH3AQ9Y2J0 694 aaPredicted RBP16.62■□□□□ 0.25
HLA-F-220ENST00000434407 NDUFAF1Q9Y375 327 aa16.62■□□□□ 0.25
HLA-F-220ENST00000434407 L3MBTL1Q9Y468 752 aa16.62■□□□□ 0.25
HLA-F-220ENST00000434407 PKDREJQ9NTG1 2253 aa16.62■□□□□ 0.25
HLA-F-220ENST00000434407 CENPEQ02224 2701 aa16.61■□□□□ 0.25
HLA-F-220ENST00000434407 OR2M5A3KFT3 312 aa16.61■□□□□ 0.25
HLA-F-220ENST00000434407 CLDN1O95832 211 aa16.61■□□□□ 0.25
HLA-F-220ENST00000434407 EPPINO95925 133 aa16.61■□□□□ 0.25
HLA-F-220ENST00000434407 LINGO3P0C6S8 592 aa16.61■□□□□ 0.25
HLA-F-220ENST00000434407 GLI4P10075 376 aa16.61■□□□□ 0.25
HLA-F-220ENST00000434407 NR2F1P10589 423 aa16.61■□□□□ 0.25
HLA-F-220ENST00000434407 ZNF708P17019 499 aa16.61■□□□□ 0.25
HLA-F-220ENST00000434407 ZNF17P17021 662 aa16.61■□□□□ 0.25
HLA-F-220ENST00000434407 PPIBP23284 216 aaKnown RBP16.61■□□□□ 0.25
HLA-F-220ENST00000434407 PSMA4P25789 261 aaKnown RBP16.61■□□□□ 0.25
HLA-F-220ENST00000434407 STARP49675 285 aa16.61■□□□□ 0.25
HLA-F-220ENST00000434407 P2RX1P51575 399 aa16.61■□□□□ 0.25
HLA-F-220ENST00000434407 SMSP52788 366 aa16.61■□□□□ 0.25
HLA-F-220ENST00000434407 CLDN18P56856 261 aa16.61■□□□□ 0.25
HLA-F-220ENST00000434407 NUP107P57740 925 aa16.61■□□□□ 0.25
HLA-F-220ENST00000434407 HPCAP84074 193 aa16.61■□□□□ 0.25
HLA-F-220ENST00000434407 KLF10Q13118 480 aa16.61■□□□□ 0.25
HLA-F-220ENST00000434407 SKP2Q13309 424 aa16.61■□□□□ 0.25
HLA-F-220ENST00000434407 FGFBP1Q14512 234 aa16.61■□□□□ 0.25
HLA-F-220ENST00000434407 ACSF3Q4G176 576 aaPredicted RBP16.61■□□□□ 0.25
HLA-F-220ENST00000434407 SEM1Q6ZVN7 128 aa16.61■□□□□ 0.25
HLA-F-220ENST00000434407 MRGPRGQ86SM5 289 aa16.61■□□□□ 0.25
HLA-F-220ENST00000434407 GTPBP8Q8N3Z3 284 aaPredicted RBP16.61■□□□□ 0.25
HLA-F-220ENST00000434407 GPR119Q8TDV5 335 aa16.61■□□□□ 0.25
HLA-F-220ENST00000434407 SLC38A5Q8WUX1 472 aa16.61■□□□□ 0.25
HLA-F-220ENST00000434407 ARSGQ96EG1 525 aa16.61■□□□□ 0.25
HLA-F-220ENST00000434407 UCN2Q96RP3 112 aa16.61■□□□□ 0.25
HLA-F-220ENST00000434407 LAT2Q9GZY6 243 aa16.61■□□□□ 0.25
HLA-F-220ENST00000434407 MTHFD2LQ9H903 347 aaPredicted RBP16.61■□□□□ 0.25
HLA-F-220ENST00000434407 CARD8Q9Y2G2 431 aa16.61■□□□□ 0.25
HLA-F-220ENST00000434407 ZNF337Q9Y3M9 751 aa16.61■□□□□ 0.25
HLA-F-220ENST00000434407 DSPPQ9NZW4 1301 aa16.61■□□□□ 0.25
HLA-F-220ENST00000434407 CRYBG3Q68DQ2 2970 aa16.61■□□□□ 0.25
HLA-F-220ENST00000434407 AGAP5A6NIR3 686 aa16.6■□□□□ 0.25
HLA-F-220ENST00000434407 GTPBP1O00178 669 aaKnown RBP16.6■□□□□ 0.25
HLA-F-220ENST00000434407 ETV2O00321 342 aaPredicted RBP16.6■□□□□ 0.25
HLA-F-220ENST00000434407 FBP2O00757 339 aa16.6■□□□□ 0.25
HLA-F-220ENST00000434407 SLC22A2O15244 555 aa16.6■□□□□ 0.25
HLA-F-220ENST00000434407 ZNF264O43296 627 aa16.6■□□□□ 0.25
HLA-F-220ENST00000434407 UBL4AP11441 157 aa16.6■□□□□ 0.25
HLA-F-220ENST00000434407 PEPDP12955 493 aa16.6■□□□□ 0.25
HLA-F-220ENST00000434407 GPX2P18283 190 aa16.6■□□□□ 0.25
HLA-F-220ENST00000434407 LSP1P33241 339 aa16.6■□□□□ 0.25
HLA-F-220ENST00000434407 PGM1P36871 562 aa16.6■□□□□ 0.25
HLA-F-220ENST00000434407 RNF144AP50876 292 aaPredicted RBP16.6■□□□□ 0.25
HLA-F-220ENST00000434407 SEC24CP53992 1094 aa16.6■□□□□ 0.25
HLA-F-220ENST00000434407 PLAURQ03405 335 aa16.6■□□□□ 0.25
HLA-F-220ENST00000434407 PMPCAQ10713 525 aa16.6■□□□□ 0.25
HLA-F-220ENST00000434407 SF3B4Q15427 424 aaKnown RBP eCLIP16.6■□□□□ 0.25
HLA-F-220ENST00000434407 RUNDC3AQ59EK9 446 aa16.6■□□□□ 0.25
HLA-F-220ENST00000434407 PRAMEF8Q5VWM4 474 aa16.6■□□□□ 0.25
HLA-F-220ENST00000434407 PRAMEF7Q5VXH5 474 aa16.6■□□□□ 0.25
HLA-F-220ENST00000434407 RAET1LQ5VY80 246 aa16.6■□□□□ 0.25
HLA-F-220ENST00000434407 NSUN5P2Q63ZY6 315 aa16.6■□□□□ 0.25
HLA-F-220ENST00000434407 EIF3MQ7L2H7 374 aaKnown RBP16.6■□□□□ 0.25
HLA-F-220ENST00000434407 ZNF614Q8N883 585 aa16.6■□□□□ 0.25
HLA-F-220ENST00000434407 OR5W2Q8NH69 310 aa16.6■□□□□ 0.25
HLA-F-220ENST00000434407 RND1Q92730 232 aa16.6■□□□□ 0.25
HLA-F-220ENST00000434407 ZBTB8AQ96BR9 441 aa16.6■□□□□ 0.25
HLA-F-220ENST00000434407 NPAS1Q99742 590 aa16.6■□□□□ 0.25
HLA-F-220ENST00000434407 CPPED1Q9BRF8 314 aaPredicted RBP16.6■□□□□ 0.25
HLA-F-220ENST00000434407 IKZF5Q9H5V7 419 aa16.6■□□□□ 0.25
HLA-F-220ENST00000434407 CALHM2Q9HA72 323 aa16.6■□□□□ 0.25
HLA-F-220ENST00000434407 A4GALTQ9NPC4 353 aa16.6■□□□□ 0.25
HLA-F-220ENST00000434407 ALKBH4Q9NXW9 302 aa16.6■□□□□ 0.25
HLA-F-220ENST00000434407 CALML5Q9NZT1 146 aa16.6■□□□□ 0.25
HLA-F-220ENST00000434407 CAMK2AQ9UQM7 478 aa16.6■□□□□ 0.25
HLA-F-220ENST00000434407 VDAC3Q9Y277 283 aa16.6■□□□□ 0.25
HLA-F-220ENST00000434407 SLC35A3Q9Y2D2 325 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms