RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 BRIX1Q8TDN6 353 aaKnown RBP10.97□□□□□ -0.65
CD44-209ENST00000433892 TMEM239Q8WW34 195 aa10.97□□□□□ -0.65
CD44-209ENST00000433892 TSACCQ96A04 125 aaPredicted RBP10.97□□□□□ -0.65
CD44-209ENST00000433892 RIPOR3Q96MK2 946 aa10.97□□□□□ -0.65
CD44-209ENST00000433892 HS6ST2Q96MM7 605 aa10.97□□□□□ -0.65
CD44-209ENST00000433892 OR2A5Q96R48 311 aa10.97□□□□□ -0.65
CD44-209ENST00000433892 C1QTNF7Q9BXJ2 289 aa10.97□□□□□ -0.65
CD44-209ENST00000433892 IGFLR1Q9H665 355 aa10.97□□□□□ -0.65
CD44-209ENST00000433892 PHF11Q9UIL8 331 aa10.97□□□□□ -0.65
CD44-209ENST00000433892 ZNF223Q9UK11 482 aaPredicted RBP10.97□□□□□ -0.65
CD44-209ENST00000433892 DAPP1Q9UN19 280 aa10.97□□□□□ -0.65
CD44-209ENST00000433892 ALG5Q9Y673 324 aa10.97□□□□□ -0.65
CD44-209ENST00000433892 LOC105369274A0A096LPK9 316 aa10.96□□□□□ -0.65
CD44-209ENST00000433892 A0A0G2JMP0 313 aa10.96□□□□□ -0.65
CD44-209ENST00000433892 LOC102723532A0A0G2JNH3 316 aa10.96□□□□□ -0.65
CD44-209ENST00000433892 A0A0X1KG70 313 aa10.96□□□□□ -0.65
CD44-209ENST00000433892 DAPL1A0PJW8 107 aa10.96□□□□□ -0.65
CD44-209ENST00000433892 OR6C70A6NIJ9 312 aa10.96□□□□□ -0.65
CD44-209ENST00000433892 K7EQS6 105 aa10.96□□□□□ -0.65
CD44-209ENST00000433892 BHLHE40O14503 412 aa10.96□□□□□ -0.65
CD44-209ENST00000433892 B3GALT2O43825 422 aa10.96□□□□□ -0.65
CD44-209ENST00000433892 RGS9O75916 674 aaPredicted RBP10.96□□□□□ -0.65
CD44-209ENST00000433892 YES1P07947 543 aa10.96□□□□□ -0.65
CD44-209ENST00000433892 MRPL3P09001 348 aaKnown RBP10.96□□□□□ -0.65
CD44-209ENST00000433892 GAAP10253 952 aa10.96□□□□□ -0.65
CD44-209ENST00000433892 BMP7P18075 431 aa10.96□□□□□ -0.65
CD44-209ENST00000433892 ALAS2P22557 587 aa10.96□□□□□ -0.65
CD44-209ENST00000433892 HLA-DMAP28067 261 aa10.96□□□□□ -0.65
CD44-209ENST00000433892 TLX1P31314 330 aaPredicted RBP10.96□□□□□ -0.65
CD44-209ENST00000433892 KIR2DL1P43626 348 aaPredicted RBP10.96□□□□□ -0.65
CD44-209ENST00000433892 RPS7P62081 194 aaKnown RBP10.96□□□□□ -0.65
CD44-209ENST00000433892 DCST2Q5T1A1 773 aa10.96□□□□□ -0.65
CD44-209ENST00000433892 C1QTNF12Q5T7M4 302 aa10.96□□□□□ -0.65
CD44-209ENST00000433892 FAM27D1Q5T7N8 215 aa10.96□□□□□ -0.65
CD44-209ENST00000433892 PRPF38BQ5VTL8 546 aaKnown RBP10.96□□□□□ -0.65
CD44-209ENST00000433892 FIGNL1Q6PIW4 674 aa10.96□□□□□ -0.65
CD44-209ENST00000433892 IL20RBQ6UXL0 311 aa10.96□□□□□ -0.65
CD44-209ENST00000433892 THSD4Q6ZMP0 1018 aa10.96□□□□□ -0.65
CD44-209ENST00000433892 PRSS41Q7RTY9 318 aa10.96□□□□□ -0.65
CD44-209ENST00000433892 ZNF438Q7Z4V0 828 aa10.96□□□□□ -0.65
CD44-209ENST00000433892 OR4N4Q8N0Y3 316 aa10.96□□□□□ -0.65
CD44-209ENST00000433892 OR4M2Q8NGB6 313 aa10.96□□□□□ -0.65
CD44-209ENST00000433892 OR10G6Q8NH81 332 aa10.96□□□□□ -0.65
CD44-209ENST00000433892 SMAP2Q8WU79 429 aaPredicted RBP10.96□□□□□ -0.65
CD44-209ENST00000433892 UPRTQ96BW1 309 aa10.96□□□□□ -0.65
CD44-209ENST00000433892 SCARF2Q96GP6 870 aaPredicted RBP10.96□□□□□ -0.65
CD44-209ENST00000433892 SERINC2Q96SA4 455 aa10.96□□□□□ -0.65
CD44-209ENST00000433892 WACQ9BTA9 647 aa10.96□□□□□ -0.65
CD44-209ENST00000433892 RPP25Q9BUL9 199 aaKnown RBP10.96□□□□□ -0.65
CD44-209ENST00000433892 JAM3Q9BX67 310 aa10.96□□□□□ -0.65
CD44-209ENST00000433892 ZNF350Q9GZX5 532 aa10.96□□□□□ -0.65
CD44-209ENST00000433892 OR51V1Q9H2C8 321 aa10.96□□□□□ -0.65
CD44-209ENST00000433892 PIGUQ9H490 435 aa10.96□□□□□ -0.65
CD44-209ENST00000433892 CLDND1Q9NY35 253 aa10.96□□□□□ -0.65
CD44-209ENST00000433892 MRPS2Q9Y399 296 aaKnown RBP10.96□□□□□ -0.65
CD44-209ENST00000433892 MYO15AQ9UKN7 3530 aa10.96□□□□□ -0.65
CD44-209ENST00000433892 E9PI62 339 aa10.96□□□□□ -0.66
CD44-209ENST00000433892 THBS1P07996 1170 aa10.96□□□□□ -0.66
CD44-209ENST00000433892 FAM157BP0CG42 384 aa10.96□□□□□ -0.66
CD44-209ENST00000433892 POLR2CP19387 275 aaPredicted RBP10.96□□□□□ -0.66
CD44-209ENST00000433892 SHC1P29353 583 aa10.96□□□□□ -0.66
CD44-209ENST00000433892 ACTR1BP42025 376 aa10.96□□□□□ -0.66
CD44-209ENST00000433892 ACTR1AP61163 376 aa10.96□□□□□ -0.66
CD44-209ENST00000433892 ZNF57Q68EA5 555 aaPredicted RBP10.96□□□□□ -0.66
CD44-209ENST00000433892 ARL9Q6T311 187 aa10.96□□□□□ -0.66
CD44-209ENST00000433892 USP53Q70EK8 1073 aa10.96□□□□□ -0.66
CD44-209ENST00000433892 SAMD14Q8IZD0 417 aaPredicted RBP10.96□□□□□ -0.66
CD44-209ENST00000433892 ZNF619Q8N2I2 560 aa10.96□□□□□ -0.66
CD44-209ENST00000433892 YIPF7Q8N8F6 280 aa10.96□□□□□ -0.66
CD44-209ENST00000433892 SLC37A3Q8NCC5 494 aa10.96□□□□□ -0.66
CD44-209ENST00000433892 DUSP18Q8NEJ0 188 aa10.96□□□□□ -0.66
CD44-209ENST00000433892 OR13C2Q8NGS9 318 aa10.96□□□□□ -0.66
CD44-209ENST00000433892 OR5W2Q8NH69 310 aa10.96□□□□□ -0.66
CD44-209ENST00000433892 FLVCR1-AS1Q8TAF5 88 aa10.96□□□□□ -0.66
CD44-209ENST00000433892 PTP4A1Q93096 173 aa10.96□□□□□ -0.66
CD44-209ENST00000433892 KISS1RQ969F8 398 aaPredicted RBP10.96□□□□□ -0.66
CD44-209ENST00000433892 TM4SF19Q96DZ7 209 aa10.96□□□□□ -0.66
CD44-209ENST00000433892 ZC3HAV1LQ96H79 300 aaKnown RBP10.96□□□□□ -0.66
CD44-209ENST00000433892 KCNJ15Q99712 375 aa10.96□□□□□ -0.66
CD44-209ENST00000433892 SLX1AQ9BQ83 275 aa10.96□□□□□ -0.66
CD44-209ENST00000433892 IFT27Q9BW83 186 aa10.96□□□□□ -0.66
CD44-209ENST00000433892 KCNN2Q9H2S1 579 aa10.96□□□□□ -0.66
CD44-209ENST00000433892 EXTL2Q9UBQ6 330 aa10.96□□□□□ -0.66
CD44-209ENST00000433892 SLC22A7Q9Y694 548 aa10.96□□□□□ -0.66
CD44-209ENST00000433892 TRAV27A0A087WT01 109 aa10.95□□□□□ -0.66
CD44-209ENST00000433892 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.95□□□□□ -0.66
CD44-209ENST00000433892 A0A1B0GVC2 190 aa10.95□□□□□ -0.66
CD44-209ENST00000433892 CDHR4A6H8M9 788 aa10.95□□□□□ -0.66
CD44-209ENST00000433892 A6NIN4 97 aa10.95□□□□□ -0.66
CD44-209ENST00000433892 STX11O75558 287 aa10.95□□□□□ -0.66
CD44-209ENST00000433892 DBIP07108 87 aaKnown RBP10.95□□□□□ -0.66
CD44-209ENST00000433892 SMIM10L1P0DMW3 83 aa10.95□□□□□ -0.66
CD44-209ENST00000433892 SAGP10523 405 aaPredicted RBP10.95□□□□□ -0.66
CD44-209ENST00000433892 CLUP10909 449 aa10.95□□□□□ -0.66
CD44-209ENST00000433892 LAMP2P13473 410 aa10.95□□□□□ -0.66
CD44-209ENST00000433892 NID1P14543 1247 aa10.95□□□□□ -0.66
CD44-209ENST00000433892 CFL1P23528 166 aaKnown RBP10.95□□□□□ -0.66
CD44-209ENST00000433892 RAB25P57735 213 aa10.95□□□□□ -0.66
CD44-209ENST00000433892 ADAM15Q13444 863 aa10.95□□□□□ -0.66
CD44-209ENST00000433892 ITPRIPL2Q3MIP1 535 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms