RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 TRIM61Q5EBN2 209 aa11.88□□□□□ -0.51
DDX56-204ENST00000431640 PLA2G2CQ5R387 149 aa11.88□□□□□ -0.51
DDX56-204ENST00000431640 FIGNL1Q6PIW4 674 aa11.88□□□□□ -0.51
DDX56-204ENST00000431640 ZC3H14Q6PJT7 736 aaKnown RBP11.88□□□□□ -0.51
DDX56-204ENST00000431640 ZNF620Q6ZNG0 422 aa11.88□□□□□ -0.51
DDX56-204ENST00000431640 DCDC5Q6ZRR9 648 aa11.88□□□□□ -0.51
DDX56-204ENST00000431640 CARFQ8N187 725 aa11.88□□□□□ -0.51
DDX56-204ENST00000431640 SLC25A45Q8N413 288 aa11.88□□□□□ -0.51
DDX56-204ENST00000431640 MFSD4AQ8N468 514 aa11.88□□□□□ -0.51
DDX56-204ENST00000431640 OR8D4Q8NGM9 314 aa11.88□□□□□ -0.51
DDX56-204ENST00000431640 BRIX1Q8TDN6 353 aaKnown RBP11.88□□□□□ -0.51
DDX56-204ENST00000431640 TMEM239Q8WW34 195 aa11.88□□□□□ -0.51
DDX56-204ENST00000431640 DGAT2Q96PD7 388 aa11.88□□□□□ -0.51
DDX56-204ENST00000431640 ELF4Q99607 663 aaPredicted RBP11.88□□□□□ -0.51
DDX56-204ENST00000431640 PRSS27Q9BQR3 290 aa11.88□□□□□ -0.51
DDX56-204ENST00000431640 CENPOQ9BU64 300 aa11.88□□□□□ -0.51
DDX56-204ENST00000431640 G6PC3Q9BUM1 346 aa11.88□□□□□ -0.51
DDX56-204ENST00000431640 TRIM2Q9C040 744 aa11.88□□□□□ -0.51
DDX56-204ENST00000431640 ERVMER34-1Q9H9K5 563 aa11.88□□□□□ -0.51
DDX56-204ENST00000431640 FOLH1BQ9HBA9 442 aa11.88□□□□□ -0.51
DDX56-204ENST00000431640 HHATLQ9HCP6 504 aa11.88□□□□□ -0.51
DDX56-204ENST00000431640 SUSD2Q9UGT4 822 aa11.88□□□□□ -0.51
DDX56-204ENST00000431640 KLHL3Q9UH77 587 aa11.88□□□□□ -0.51
DDX56-204ENST00000431640 CLEC2DQ9UHP7 191 aa11.88□□□□□ -0.51
DDX56-204ENST00000431640 STUB1Q9UNE7 303 aa11.88□□□□□ -0.51
DDX56-204ENST00000431640 SSR3Q9UNL2 185 aa11.88□□□□□ -0.51
DDX56-204ENST00000431640 NTNG1Q9Y2I2 539 aa11.88□□□□□ -0.51
DDX56-204ENST00000431640 PNMA8CA0A1B0GUJ8 204 aa11.88□□□□□ -0.51
DDX56-204ENST00000431640 GXYLT2A0PJZ3 443 aa11.88□□□□□ -0.51
DDX56-204ENST00000431640 TLCD2A6NGC4 264 aa11.88□□□□□ -0.51
DDX56-204ENST00000431640 SAGE2PA6NJ88 616 aa11.88□□□□□ -0.51
DDX56-204ENST00000431640 SURF4O15260 269 aa11.88□□□□□ -0.51
DDX56-204ENST00000431640 PRAMEF2O60811 474 aa11.88□□□□□ -0.51
DDX56-204ENST00000431640 OCM2P0CE71 109 aa11.88□□□□□ -0.51
DDX56-204ENST00000431640 OCMP0CE72 109 aaPredicted RBP11.88□□□□□ -0.51
DDX56-204ENST00000431640 CKMT1AP12532 417 aa11.88□□□□□ -0.51
DDX56-204ENST00000431640 BMP4P12644 408 aa11.88□□□□□ -0.51
DDX56-204ENST00000431640 GNSP15586 552 aa11.88□□□□□ -0.51
DDX56-204ENST00000431640 BMP7P18075 431 aa11.88□□□□□ -0.51
DDX56-204ENST00000431640 EPHA8P29322 1005 aaPredicted RBP11.88□□□□□ -0.51
DDX56-204ENST00000431640 HOXD12P35452 270 aa11.88□□□□□ -0.51
DDX56-204ENST00000431640 MLLT3P42568 568 aaPredicted RBP11.88□□□□□ -0.51
DDX56-204ENST00000431640 PPM1FP49593 454 aaPredicted RBP11.88□□□□□ -0.51
DDX56-204ENST00000431640 WNT4P56705 351 aa11.88□□□□□ -0.51
DDX56-204ENST00000431640 SERTAD2Q14140 314 aa11.88□□□□□ -0.51
DDX56-204ENST00000431640 SSX1Q16384 188 aa11.88□□□□□ -0.51
DDX56-204ENST00000431640 DEFB133Q30KQ1 61 aa11.88□□□□□ -0.51
DDX56-204ENST00000431640 HLA-BQ31612 363 aa11.88□□□□□ -0.51
DDX56-204ENST00000431640 PGGHGQ32M88 737 aa11.88□□□□□ -0.51
DDX56-204ENST00000431640 NXNL2Q5VZ03 156 aa11.88□□□□□ -0.51
DDX56-204ENST00000431640 SLC23A3Q6PIS1 610 aa11.88□□□□□ -0.51
DDX56-204ENST00000431640 TMPRSS11FQ6ZWK6 438 aa11.88□□□□□ -0.51
DDX56-204ENST00000431640 ZNF550Q7Z398 422 aa11.88□□□□□ -0.51
DDX56-204ENST00000431640 BCDIN3DQ7Z5W3 292 aaKnown RBP11.88□□□□□ -0.51
DDX56-204ENST00000431640 GATAD2AQ86YP4 633 aa11.88□□□□□ -0.51
DDX56-204ENST00000431640 CENPSQ8N2Z9 138 aa11.88□□□□□ -0.51
DDX56-204ENST00000431640 SLC43A2Q8N370 569 aa11.88□□□□□ -0.51
DDX56-204ENST00000431640 POGLUT1Q8NBL1 392 aa11.88□□□□□ -0.51
DDX56-204ENST00000431640 OR52L1Q8NGH7 329 aa11.88□□□□□ -0.51
DDX56-204ENST00000431640 ABTB1Q969K4 478 aaPredicted RBP11.88□□□□□ -0.51
DDX56-204ENST00000431640 PEX11GQ96HA9 241 aa11.88□□□□□ -0.51
DDX56-204ENST00000431640 FBXO34Q9NWN3 711 aa11.88□□□□□ -0.51
DDX56-204ENST00000431640 NDUFB11Q9NX14 153 aa11.88□□□□□ -0.51
DDX56-204ENST00000431640 HCN3Q9P1Z3 774 aa11.88□□□□□ -0.51
DDX56-204ENST00000431640 CRNNQ9UBG3 495 aaPredicted RBP11.88□□□□□ -0.51
DDX56-204ENST00000431640 KCNE5Q9UJ90 142 aa11.88□□□□□ -0.51
DDX56-204ENST00000431640 MED31Q9Y3C7 131 aa11.88□□□□□ -0.51
DDX56-204ENST00000431640 hCG_2014768A0A024R1R8 64 aa11.87□□□□□ -0.51
DDX56-204ENST00000431640 A0A1B0GTQ1 180 aa11.87□□□□□ -0.51
DDX56-204ENST00000431640 FITM1A5D6W6 292 aa11.87□□□□□ -0.51
DDX56-204ENST00000431640 PEX12O00623 359 aa11.87□□□□□ -0.51
DDX56-204ENST00000431640 DSCR3O14972 297 aa11.87□□□□□ -0.51
DDX56-204ENST00000431640 ZNF749O43361 778 aa11.87□□□□□ -0.51
DDX56-204ENST00000431640 GKN3PP0CG01 181 aa11.87□□□□□ -0.51
DDX56-204ENST00000431640 CPEP16870 476 aa11.87□□□□□ -0.51
DDX56-204ENST00000431640 TGFBR1P36897 503 aa11.87□□□□□ -0.51
DDX56-204ENST00000431640 RBM34P42696 430 aaKnown RBP11.87□□□□□ -0.51
DDX56-204ENST00000431640 GPR4P46093 362 aa11.87□□□□□ -0.51
DDX56-204ENST00000431640 GABRA4P48169 554 aa11.87□□□□□ -0.51
DDX56-204ENST00000431640 EMDP50402 254 aa11.87□□□□□ -0.51
DDX56-204ENST00000431640 CTBP2P56545 445 aa11.87□□□□□ -0.51
DDX56-204ENST00000431640 COPZ1P61923 177 aa11.87□□□□□ -0.51
DDX56-204ENST00000431640 PSG6Q00889 435 aa11.87□□□□□ -0.51
DDX56-204ENST00000431640 GRM7Q14831 915 aa11.87□□□□□ -0.51
DDX56-204ENST00000431640 AMZ1Q400G9 498 aa11.87□□□□□ -0.51
DDX56-204ENST00000431640 C14orf28Q4W4Y0 310 aa11.87□□□□□ -0.51
DDX56-204ENST00000431640 CLEC12AQ5QGZ9 265 aa11.87□□□□□ -0.51
DDX56-204ENST00000431640 AADACL4Q5VUY2 407 aa11.87□□□□□ -0.51
DDX56-204ENST00000431640 LAPTM4BQ86VI4 370 aa11.87□□□□□ -0.51
DDX56-204ENST00000431640 CMIPQ8IY22 773 aa11.87□□□□□ -0.51
DDX56-204ENST00000431640 DOK4Q8TEW6 326 aa11.87□□□□□ -0.51
DDX56-204ENST00000431640 OIT3Q8WWZ8 545 aa11.87□□□□□ -0.51
DDX56-204ENST00000431640 CDADC1Q9BWV3 514 aa11.87□□□□□ -0.51
DDX56-204ENST00000431640 MROQ9BYG7 248 aa11.87□□□□□ -0.51
DDX56-204ENST00000431640 FN3KQ9H479 309 aa11.87□□□□□ -0.51
DDX56-204ENST00000431640 Q9N2J8 555 aa11.87□□□□□ -0.51
DDX56-204ENST00000431640 IRAK4Q9NWZ3 460 aa11.87□□□□□ -0.51
DDX56-204ENST00000431640 SOHLH2Q9NX45 425 aa11.87□□□□□ -0.51
DDX56-204ENST00000431640 ZNF223Q9UK11 482 aaPredicted RBP11.87□□□□□ -0.51
DDX56-204ENST00000431640 EXOGQ9Y2C4 368 aaKnown RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms