RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 FRS3O43559 492 aa16.74■□□□□ 0.27
HMGN1-206ENST00000431390 FMO6PO60774 539 aa16.74■□□□□ 0.27
HMGN1-206ENST00000431390 ICOSLGO75144 302 aa16.74■□□□□ 0.27
HMGN1-206ENST00000431390 GADD45GO95257 159 aa16.74■□□□□ 0.27
HMGN1-206ENST00000431390 TMED10P49755 219 aaKnown RBP16.74■□□□□ 0.27
HMGN1-206ENST00000431390 ZNF136P52737 540 aa16.74■□□□□ 0.27
HMGN1-206ENST00000431390 CDH12P55289 794 aa16.74■□□□□ 0.27
HMGN1-206ENST00000431390 PLAURQ03405 335 aa16.74■□□□□ 0.27
HMGN1-206ENST00000431390 GANABQ14697 944 aaKnown RBP16.74■□□□□ 0.27
HMGN1-206ENST00000431390 STK32CQ86UX6 486 aa16.74■□□□□ 0.27
HMGN1-206ENST00000431390 ARMC10Q8N2F6 343 aa16.74■□□□□ 0.27
HMGN1-206ENST00000431390 GALNT4Q8N4A0 578 aa16.74■□□□□ 0.27
HMGN1-206ENST00000431390 PIK3C3Q8NEB9 887 aa16.74■□□□□ 0.27
HMGN1-206ENST00000431390 OR4C15Q8NGM1 316 aa16.74■□□□□ 0.27
HMGN1-206ENST00000431390 TESQ9UGI8 421 aaKnown RBP16.74■□□□□ 0.27
HMGN1-206ENST00000431390 IL17BQ9UHF5 180 aa16.74■□□□□ 0.27
HMGN1-206ENST00000431390 MRPS18BQ9Y676 258 aaKnown RBP16.74■□□□□ 0.27
HMGN1-206ENST00000431390 CFAP46Q8IYW2 2715 aa16.74■□□□□ 0.27
HMGN1-206ENST00000431390 TENM4Q6N022 2769 aa16.74■□□□□ 0.27
HMGN1-206ENST00000431390 EI24O14681 340 aa16.73■□□□□ 0.27
HMGN1-206ENST00000431390 TPST2O60704 377 aa16.73■□□□□ 0.27
HMGN1-206ENST00000431390 UGT2B11O75310 529 aa16.73■□□□□ 0.27
HMGN1-206ENST00000431390 CELA2AP08217 269 aa16.73■□□□□ 0.27
HMGN1-206ENST00000431390 ENDOUP21128 410 aaKnown RBP16.73■□□□□ 0.27
HMGN1-206ENST00000431390 IFNA8P32881 189 aa16.73■□□□□ 0.27
HMGN1-206ENST00000431390 LIMS1P48059 325 aa16.73■□□□□ 0.27
HMGN1-206ENST00000431390 AQP4P55087 323 aa16.73■□□□□ 0.27
HMGN1-206ENST00000431390 TMPRSS3P57727 454 aa16.73■□□□□ 0.27
HMGN1-206ENST00000431390 PPP1R8Q12972 351 aaKnown RBP16.73■□□□□ 0.27
HMGN1-206ENST00000431390 CHAF1BQ13112 559 aa16.73■□□□□ 0.27
HMGN1-206ENST00000431390 FNDC7Q5VTL7 733 aa16.73■□□□□ 0.27
HMGN1-206ENST00000431390 TBPL2Q6SJ96 375 aa16.73■□□□□ 0.27
HMGN1-206ENST00000431390 C16orf47Q6ZP98 133 aaPredicted RBP16.73■□□□□ 0.27
HMGN1-206ENST00000431390 OFCC1Q8IZS5 231 aa16.73■□□□□ 0.27
HMGN1-206ENST00000431390 DNAJC9Q8WXX5 260 aa16.73■□□□□ 0.27
HMGN1-206ENST00000431390 MCHR1Q99705 422 aa16.73■□□□□ 0.27
HMGN1-206ENST00000431390 NMNAT1Q9HAN9 279 aaPredicted RBP16.73■□□□□ 0.27
HMGN1-206ENST00000431390 DNAJB12Q9NXW2 375 aaKnown RBP16.73■□□□□ 0.27
HMGN1-206ENST00000431390 USE1Q9NZ43 259 aa16.73■□□□□ 0.27
HMGN1-206ENST00000431390 FLRT3Q9NZU0 649 aa16.73■□□□□ 0.27
HMGN1-206ENST00000431390 LRRC42Q9Y546 428 aa16.73■□□□□ 0.27
HMGN1-206ENST00000431390 PCSK5Q92824 1860 aa16.73■□□□□ 0.27
HMGN1-206ENST00000431390 ALG1L2C9J202 215 aa16.72■□□□□ 0.27
HMGN1-206ENST00000431390 H3BNH8 94 aa16.72■□□□□ 0.27
HMGN1-206ENST00000431390 ZNF354AO60765 605 aaPredicted RBP16.72■□□□□ 0.27
HMGN1-206ENST00000431390 OR2J2O76002 312 aa16.72■□□□□ 0.27
HMGN1-206ENST00000431390 HPRP00739 348 aa16.72■□□□□ 0.27
HMGN1-206ENST00000431390 H1F0P07305 194 aaKnown RBP16.72■□□□□ 0.27
HMGN1-206ENST00000431390 HSPA13P48723 471 aa16.72■□□□□ 0.27
HMGN1-206ENST00000431390 ALDH3A2P51648 485 aa16.72■□□□□ 0.27
HMGN1-206ENST00000431390 PIN1Q13526 163 aaPredicted RBP16.72■□□□□ 0.27
HMGN1-206ENST00000431390 DAG1Q14118 895 aa16.72■□□□□ 0.27
HMGN1-206ENST00000431390 OTUD3Q5T2D3 398 aaPredicted RBP16.72■□□□□ 0.27
HMGN1-206ENST00000431390 BROXQ5VW32 411 aa16.72■□□□□ 0.27
HMGN1-206ENST00000431390 LYPD8Q6UX82 237 aa16.72■□□□□ 0.27
HMGN1-206ENST00000431390 ZNF550Q7Z398 422 aa16.72■□□□□ 0.27
HMGN1-206ENST00000431390 NUP54Q7Z3B4 507 aa16.72■□□□□ 0.27
HMGN1-206ENST00000431390 ZNF440Q8IYI8 595 aa16.72■□□□□ 0.27
HMGN1-206ENST00000431390 FAM71CQ8NEG0 241 aa16.72■□□□□ 0.27
HMGN1-206ENST00000431390 CNOT9Q92600 299 aaKnown RBP16.72■□□□□ 0.27
HMGN1-206ENST00000431390 ZNF597Q96LX8 424 aa16.72■□□□□ 0.27
HMGN1-206ENST00000431390 RBM4BQ9BQ04 359 aaKnown RBP16.72■□□□□ 0.27
HMGN1-206ENST00000431390 FNDC11Q9BVV2 318 aa16.72■□□□□ 0.27
HMGN1-206ENST00000431390 RBM4Q9BWF3 364 aaKnown RBP16.72■□□□□ 0.27
HMGN1-206ENST00000431390 ZBTB20Q9HC78 741 aaPredicted RBP16.72■□□□□ 0.27
HMGN1-206ENST00000431390 MAGED1Q9Y5V3 778 aaPredicted RBP16.72■□□□□ 0.27
HMGN1-206ENST00000431390 A0A1W2PRQ8 180 aa16.72■□□□□ 0.27
HMGN1-206ENST00000431390 BCAS1O75363 584 aaPredicted RBP16.72■□□□□ 0.27
HMGN1-206ENST00000431390 OR5F1O95221 314 aa16.72■□□□□ 0.27
HMGN1-206ENST00000431390 CSTAP01040 98 aa16.72■□□□□ 0.27
HMGN1-206ENST00000431390 SERPINA7P05543 415 aa16.72■□□□□ 0.27
HMGN1-206ENST00000431390 FBXO45P0C2W1 286 aa16.72■□□□□ 0.27
HMGN1-206ENST00000431390 TAS2R41P59536 307 aa16.72■□□□□ 0.27
HMGN1-206ENST00000431390 PPP2R2BQ00005 443 aa16.72■□□□□ 0.27
HMGN1-206ENST00000431390 DGCR6Q14129 220 aa16.72■□□□□ 0.27
HMGN1-206ENST00000431390 ENTPD8Q5MY95 495 aa16.72■□□□□ 0.27
HMGN1-206ENST00000431390 HS3ST5Q8IZT8 346 aa16.72■□□□□ 0.27
HMGN1-206ENST00000431390 POGLUT1Q8NBL1 392 aa16.72■□□□□ 0.27
HMGN1-206ENST00000431390 TTC9Q92623 222 aa16.72■□□□□ 0.27
HMGN1-206ENST00000431390 HGDQ93099 445 aa16.72■□□□□ 0.27
HMGN1-206ENST00000431390 TMCO6Q96DC7 493 aa16.72■□□□□ 0.27
HMGN1-206ENST00000431390 RASL10BQ96S79 203 aa16.72■□□□□ 0.27
HMGN1-206ENST00000431390 PSD2Q9BQI7 771 aa16.72■□□□□ 0.27
HMGN1-206ENST00000431390 ZNF559Q9BR84 538 aa16.72■□□□□ 0.27
HMGN1-206ENST00000431390 ANKRD19PQ9H560 264 aa16.72■□□□□ 0.27
HMGN1-206ENST00000431390 EXOSC3Q9NQT5 275 aaKnown RBP16.72■□□□□ 0.27
HMGN1-206ENST00000431390 PDP1Q9P0J1 537 aaPredicted RBP16.72■□□□□ 0.27
HMGN1-206ENST00000431390 YARS2Q9Y2Z4 477 aaKnown RBP16.72■□□□□ 0.27
HMGN1-206ENST00000431390 CYSRT1A8MQ03 144 aa16.71■□□□□ 0.27
HMGN1-206ENST00000431390 FADS1O60427 444 aa16.71■□□□□ 0.27
HMGN1-206ENST00000431390 ALPLP05186 524 aa16.71■□□□□ 0.27
HMGN1-206ENST00000431390 GKN3PP0CG01 181 aa16.71■□□□□ 0.27
HMGN1-206ENST00000431390 ITGAMP11215 1152 aa16.71■□□□□ 0.27
HMGN1-206ENST00000431390 UBL4AP11441 157 aa16.71■□□□□ 0.27
HMGN1-206ENST00000431390 LIFP15018 202 aa16.71■□□□□ 0.27
HMGN1-206ENST00000431390 ELAVL4P26378 380 aaKnown RBP16.71■□□□□ 0.27
HMGN1-206ENST00000431390 EVI2BP34910 448 aa16.71■□□□□ 0.27
HMGN1-206ENST00000431390 RNF144AP50876 292 aaPredicted RBP16.71■□□□□ 0.27
HMGN1-206ENST00000431390 ST3GAL3Q11203 375 aa16.71■□□□□ 0.27
HMGN1-206ENST00000431390 ATP1A4Q13733 1029 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms