RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 HS6ST2Q96MM7 605 aa12.9□□□□□ -0.34
HOXC4-202ENST00000430889 NELL2Q99435 816 aa12.9□□□□□ -0.34
HOXC4-202ENST00000430889 SDHCQ99643 169 aaPredicted RBP12.9□□□□□ -0.34
HOXC4-202ENST00000430889 NEURL2Q9BR09 285 aa12.9□□□□□ -0.34
HOXC4-202ENST00000430889 FN3KQ9H479 309 aa12.9□□□□□ -0.34
HOXC4-202ENST00000430889 ATP13A2Q9NQ11 1180 aa12.9□□□□□ -0.34
HOXC4-202ENST00000430889 MEPEQ9NQ76 525 aaPredicted RBP12.9□□□□□ -0.34
HOXC4-202ENST00000430889 TXNL4BQ9NX01 149 aaKnown RBP12.9□□□□□ -0.34
HOXC4-202ENST00000430889 TMEM5Q9Y2B1 443 aa12.9□□□□□ -0.34
HOXC4-202ENST00000430889 NUP210LQ5VU65 1888 aa12.9□□□□□ -0.34
HOXC4-202ENST00000430889 H3BMH7 237 aa12.89□□□□□ -0.35
HOXC4-202ENST00000430889 ZNF749O43361 778 aa12.89□□□□□ -0.35
HOXC4-202ENST00000430889 CHP2O43745 196 aa12.89□□□□□ -0.35
HOXC4-202ENST00000430889 PTP4A3O75365 173 aa12.89□□□□□ -0.35
HOXC4-202ENST00000430889 RFPL3O75679 317 aa12.89□□□□□ -0.35
HOXC4-202ENST00000430889 SNX4O95219 450 aa12.89□□□□□ -0.35
HOXC4-202ENST00000430889 GAAP10253 952 aa12.89□□□□□ -0.35
HOXC4-202ENST00000430889 FUT1P19526 365 aa12.89□□□□□ -0.35
HOXC4-202ENST00000430889 PTNP21246 168 aa12.89□□□□□ -0.35
HOXC4-202ENST00000430889 SSTR4P31391 388 aa12.89□□□□□ -0.35
HOXC4-202ENST00000430889 GALNSP34059 522 aa12.89□□□□□ -0.35
HOXC4-202ENST00000430889 RNF144AP50876 292 aaPredicted RBP12.89□□□□□ -0.35
HOXC4-202ENST00000430889 SKP1P63208 163 aa12.89□□□□□ -0.35
HOXC4-202ENST00000430889 RACK1P63244 317 aaKnown RBP12.89□□□□□ -0.35
HOXC4-202ENST00000430889 MAT1AQ00266 395 aaKnown RBP12.89□□□□□ -0.35
HOXC4-202ENST00000430889 FUT7Q11130 342 aa12.89□□□□□ -0.35
HOXC4-202ENST00000430889 CDC20Q12834 499 aa12.89□□□□□ -0.35
HOXC4-202ENST00000430889 FHL1Q13642 323 aa12.89□□□□□ -0.35
HOXC4-202ENST00000430889 FGFBP1Q14512 234 aa12.89□□□□□ -0.35
HOXC4-202ENST00000430889 SMAD2Q15796 467 aaKnown RBP12.89□□□□□ -0.35
HOXC4-202ENST00000430889 THSD4Q6ZMP0 1018 aa12.89□□□□□ -0.35
HOXC4-202ENST00000430889 QSOX2Q6ZRP7 698 aa12.89□□□□□ -0.35
HOXC4-202ENST00000430889 MED25Q71SY5 747 aa12.89□□□□□ -0.35
HOXC4-202ENST00000430889 SHFQ7M4L6 423 aa12.89□□□□□ -0.35
HOXC4-202ENST00000430889 C11orf74Q86VG3 221 aa12.89□□□□□ -0.35
HOXC4-202ENST00000430889 LSMEM1Q8N8F7 131 aa12.89□□□□□ -0.35
HOXC4-202ENST00000430889 OR9Q1Q8NGQ5 310 aa12.89□□□□□ -0.35
HOXC4-202ENST00000430889 FANK1Q8TC84 345 aa12.89□□□□□ -0.35
HOXC4-202ENST00000430889 LMX1AQ8TE12 382 aa12.89□□□□□ -0.35
HOXC4-202ENST00000430889 RIT1Q92963 219 aa12.89□□□□□ -0.35
HOXC4-202ENST00000430889 WDFY2Q96P53 400 aa12.89□□□□□ -0.35
HOXC4-202ENST00000430889 TEX12Q9BXU0 123 aa12.89□□□□□ -0.35
HOXC4-202ENST00000430889 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.89□□□□□ -0.35
HOXC4-202ENST00000430889 RAB33BQ9H082 229 aa12.89□□□□□ -0.35
HOXC4-202ENST00000430889 SMURF1Q9HCE7 757 aa12.89□□□□□ -0.35
HOXC4-202ENST00000430889 EPHA6Q9UF33 1036 aa12.89□□□□□ -0.35
HOXC4-202ENST00000430889 CA14Q9ULX7 337 aa12.89□□□□□ -0.35
HOXC4-202ENST00000430889 SSR3Q9UNL2 185 aa12.89□□□□□ -0.35
HOXC4-202ENST00000430889 PLCL2Q9UPR0 1127 aa12.89□□□□□ -0.35
HOXC4-202ENST00000430889 SIGLEC7Q9Y286 467 aa12.89□□□□□ -0.35
HOXC4-202ENST00000430889 TMEM184BQ9Y519 407 aaPredicted RBP12.89□□□□□ -0.35
HOXC4-202ENST00000430889 SPIN1Q9Y657 262 aaPredicted RBP12.89□□□□□ -0.35
HOXC4-202ENST00000430889 CSNK1G3Q9Y6M4 447 aa12.89□□□□□ -0.35
HOXC4-202ENST00000430889 TMEM265A0A087WTH1 108 aa12.89□□□□□ -0.35
HOXC4-202ENST00000430889 A0A1B0GWA3 101 aa12.89□□□□□ -0.35
HOXC4-202ENST00000430889 SLC35F4A4IF30 521 aa12.89□□□□□ -0.35
HOXC4-202ENST00000430889 TLCD2A6NGC4 264 aa12.89□□□□□ -0.35
HOXC4-202ENST00000430889 SOCS6O14544 535 aa12.89□□□□□ -0.35
HOXC4-202ENST00000430889 CTDSP2O14595 271 aa12.89□□□□□ -0.35
HOXC4-202ENST00000430889 PLD2O14939 933 aa12.89□□□□□ -0.35
HOXC4-202ENST00000430889 HYAL3O43820 417 aaPredicted RBP12.89□□□□□ -0.35
HOXC4-202ENST00000430889 LALBAP00709 142 aa12.89□□□□□ -0.35
HOXC4-202ENST00000430889 IL1AP01583 271 aa12.89□□□□□ -0.35
HOXC4-202ENST00000430889 MSL3P1P0C860 447 aa12.89□□□□□ -0.35
HOXC4-202ENST00000430889 CT45A8P0DMV1 189 aa12.89□□□□□ -0.35
HOXC4-202ENST00000430889 CT45A9P0DMV2 189 aa12.89□□□□□ -0.35
HOXC4-202ENST00000430889 IFI30P13284 250 aa12.89□□□□□ -0.35
HOXC4-202ENST00000430889 S100A5P33763 92 aa12.89□□□□□ -0.35
HOXC4-202ENST00000430889 GFERP55789 205 aa12.89□□□□□ -0.35
HOXC4-202ENST00000430889 RPS25P62851 125 aaKnown RBP12.89□□□□□ -0.35
HOXC4-202ENST00000430889 BTG2P78543 158 aa12.89□□□□□ -0.35
HOXC4-202ENST00000430889 LRIT3Q3SXY7 679 aa12.89□□□□□ -0.35
HOXC4-202ENST00000430889 CT45A2Q5DJT8 189 aa12.89□□□□□ -0.35
HOXC4-202ENST00000430889 STEAP3Q658P3 488 aa12.89□□□□□ -0.35
HOXC4-202ENST00000430889 RPL13AP3Q6NVV1 102 aa12.89□□□□□ -0.35
HOXC4-202ENST00000430889 NIPAL3Q6P499 406 aa12.89□□□□□ -0.35
HOXC4-202ENST00000430889 ZC3H14Q6PJT7 736 aaKnown RBP12.89□□□□□ -0.35
HOXC4-202ENST00000430889 HSDL2Q6YN16 418 aa12.89□□□□□ -0.35
HOXC4-202ENST00000430889 LAPTM4BQ86VI4 370 aa12.89□□□□□ -0.35
HOXC4-202ENST00000430889 DEFB119Q8N690 84 aa12.89□□□□□ -0.35
HOXC4-202ENST00000430889 ZNF615Q8N8J6 731 aa12.89□□□□□ -0.35
HOXC4-202ENST00000430889 OR4F15Q8NGB8 312 aa12.89□□□□□ -0.35
HOXC4-202ENST00000430889 OR52N1Q8NH53 320 aa12.89□□□□□ -0.35
HOXC4-202ENST00000430889 KISS1RQ969F8 398 aaPredicted RBP12.89□□□□□ -0.35
HOXC4-202ENST00000430889 BPIFA2Q96DR5 249 aa12.89□□□□□ -0.35
HOXC4-202ENST00000430889 ZNF578Q96N58 590 aaPredicted RBP12.89□□□□□ -0.35
HOXC4-202ENST00000430889 CD180Q99467 661 aa12.89□□□□□ -0.35
HOXC4-202ENST00000430889 TIMP4Q99727 224 aa12.89□□□□□ -0.35
HOXC4-202ENST00000430889 MED18Q9BUE0 208 aa12.89□□□□□ -0.35
HOXC4-202ENST00000430889 EXOSC4Q9NPD3 245 aaKnown RBP12.89□□□□□ -0.35
HOXC4-202ENST00000430889 PRTFDC1Q9NRG1 225 aa12.89□□□□□ -0.35
HOXC4-202ENST00000430889 IL20RAQ9UHF4 553 aa12.89□□□□□ -0.35
HOXC4-202ENST00000430889 DOLKQ9UPQ8 538 aa12.89□□□□□ -0.35
HOXC4-202ENST00000430889 MRPS33Q9Y291 106 aaKnown RBP12.89□□□□□ -0.35
HOXC4-202ENST00000430889 YARS2Q9Y2Z4 477 aaKnown RBP12.89□□□□□ -0.35
HOXC4-202ENST00000430889 GON4LQ3T8J9 2241 aa12.89□□□□□ -0.35
HOXC4-202ENST00000430889 HEATR5AQ86XA9 2040 aa12.88□□□□□ -0.35
HOXC4-202ENST00000430889 ADAMTS20P59510 1910 aa12.88□□□□□ -0.35
HOXC4-202ENST00000430889 PRUNE2Q8WUY3 3088 aa12.88□□□□□ -0.35
HOXC4-202ENST00000430889 IGHV5-51A0A0C4DH38 117 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms