RNA–Protein interactions for RNA: ENST00000430617.6

ATG4B-212, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 623 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-212ENST00000430617 PTH2RP49190 550 aa9.16□□□□□ -0.94
ATG4B-212ENST00000430617 AGFG1P52594 562 aaKnown RBP9.16□□□□□ -0.94
ATG4B-212ENST00000430617 ACTR3P61158 418 aa9.16□□□□□ -0.94
ATG4B-212ENST00000430617 MRPS35P82673 323 aaKnown RBP9.16□□□□□ -0.94
ATG4B-212ENST00000430617 PLGLB1Q02325 96 aa9.16□□□□□ -0.94
ATG4B-212ENST00000430617 SLC13A2Q13183 592 aa9.16□□□□□ -0.94
ATG4B-212ENST00000430617 DUSP8Q13202 625 aa9.16□□□□□ -0.94
ATG4B-212ENST00000430617 TRIM25Q14258 630 aaKnown RBP9.16□□□□□ -0.94
ATG4B-212ENST00000430617 KPNB1Q14974 876 aaKnown RBP9.16□□□□□ -0.94
ATG4B-212ENST00000430617 RGNQ15493 299 aa9.16□□□□□ -0.94
ATG4B-212ENST00000430617 ADRM1Q16186 407 aa9.16□□□□□ -0.94
ATG4B-212ENST00000430617 COX20Q5RI15 118 aa9.16□□□□□ -0.94
ATG4B-212ENST00000430617 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.16□□□□□ -0.949e-11■■□□□ 13.2
ATG4B-212ENST00000430617 C1orf146Q5VVC0 180 aa9.16□□□□□ -0.94
ATG4B-212ENST00000430617 LCN8Q6JVE9 175 aa9.16□□□□□ -0.94
ATG4B-212ENST00000430617 RNF130Q86XS8 419 aa9.16□□□□□ -0.94
ATG4B-212ENST00000430617 KIF18BQ86Y91 864 aa9.16□□□□□ -0.94
ATG4B-212ENST00000430617 MICU2Q8IYU8 434 aa9.16□□□□□ -0.94
ATG4B-212ENST00000430617 ARMC10Q8N2F6 343 aa9.16□□□□□ -0.94
ATG4B-212ENST00000430617 TMEM251Q8N6I4 163 aa9.16□□□□□ -0.94
ATG4B-212ENST00000430617 OR2T12Q8NG77 320 aa9.16□□□□□ -0.94
ATG4B-212ENST00000430617 OR2M7Q8NG81 312 aa9.16□□□□□ -0.94
ATG4B-212ENST00000430617 OR56A1Q8NGH5 318 aa9.16□□□□□ -0.94
ATG4B-212ENST00000430617 OR10A6Q8NH74 314 aa9.16□□□□□ -0.94
ATG4B-212ENST00000430617 MIPOL1Q8TD10 442 aa9.16□□□□□ -0.94
ATG4B-212ENST00000430617 SMPDL3BQ92485 455 aa9.16□□□□□ -0.94
ATG4B-212ENST00000430617 SLC35G5Q96KT7 338 aa9.16□□□□□ -0.94
ATG4B-212ENST00000430617 MS4A4EQ96PG1 132 aa9.16□□□□□ -0.94
ATG4B-212ENST00000430617 PELOQ9BRX2 385 aaKnown RBP9.16□□□□□ -0.94
ATG4B-212ENST00000430617 THUMPD3Q9BV44 507 aaKnown RBP9.16□□□□□ -0.94
ATG4B-212ENST00000430617 GSX2Q9BZM3 304 aa9.16□□□□□ -0.94
ATG4B-212ENST00000430617 PCDHAC1Q9H158 963 aa9.16□□□□□ -0.94
ATG4B-212ENST00000430617 YAE1D1Q9NRH1 226 aa9.16□□□□□ -0.94
ATG4B-212ENST00000430617 ZCCHC3Q9NUD5 404 aaKnown RBP9.16□□□□□ -0.94
ATG4B-212ENST00000430617 ZNF639Q9UID6 485 aa9.16□□□□□ -0.94
ATG4B-212ENST00000430617 SNX13Q9Y5W8 968 aa9.16□□□□□ -0.94
ATG4B-212ENST00000430617 SNX8Q9Y5X2 465 aa9.16□□□□□ -0.94
ATG4B-212ENST00000430617 MGAM2Q2M2H8 2515 aa9.15□□□□□ -0.94
ATG4B-212ENST00000430617 FREM1Q5H8C1 2179 aa9.15□□□□□ -0.94
ATG4B-212ENST00000430617 PRR14LQ5THK1 2151 aa9.15□□□□□ -0.94
ATG4B-212ENST00000430617 MYOCOSA0A1B0GUC4 107 aa9.15□□□□□ -0.94
ATG4B-212ENST00000430617 SYNDIG1LA6NDD5 238 aa9.15□□□□□ -0.94
ATG4B-212ENST00000430617 EVPLLA8MZ36 301 aa9.15□□□□□ -0.94
ATG4B-212ENST00000430617 FAM47E-STBD1D6RA91 191 aa9.15□□□□□ -0.94
ATG4B-212ENST00000430617 RNF223E7ERA6 249 aa9.15□□□□□ -0.94
ATG4B-212ENST00000430617 UPK1AO00322 258 aa9.15□□□□□ -0.94
ATG4B-212ENST00000430617 EMC8O43402 210 aa9.15□□□□□ -0.94
ATG4B-212ENST00000430617 PLOD3O60568 738 aa9.15□□□□□ -0.94
ATG4B-212ENST00000430617 ITGA10O75578 1167 aa9.15□□□□□ -0.94
ATG4B-212ENST00000430617 CBX7O95931 251 aa9.15□□□□□ -0.94
ATG4B-212ENST00000430617 CLPSP04118 112 aa9.15□□□□□ -0.94
ATG4B-212ENST00000430617 NUDT7P0C024 238 aa9.15□□□□□ -0.94
ATG4B-212ENST00000430617 ETFAP13804 333 aa9.15□□□□□ -0.94
ATG4B-212ENST00000430617 GGT1P19440 569 aa9.15□□□□□ -0.94
ATG4B-212ENST00000430617 NT5EP21589 574 aa9.15□□□□□ -0.94
ATG4B-212ENST00000430617 CEACAM8P31997 349 aaPredicted RBP9.15□□□□□ -0.94
ATG4B-212ENST00000430617 PCGF2P35227 344 aa9.15□□□□□ -0.94
ATG4B-212ENST00000430617 MSX2P35548 267 aaPredicted RBP9.15□□□□□ -0.94
ATG4B-212ENST00000430617 CHI3L1P36222 383 aaPredicted RBP9.15□□□□□ -0.94
ATG4B-212ENST00000430617 CCT3P49368 545 aaKnown RBP9.15□□□□□ -0.94
ATG4B-212ENST00000430617 MAN2A2P49641 1150 aa9.15□□□□□ -0.94
ATG4B-212ENST00000430617 ZNF136P52737 540 aa9.15□□□□□ -0.94
ATG4B-212ENST00000430617 RPS26P62854 115 aaKnown RBP9.15□□□□□ -0.94
ATG4B-212ENST00000430617 PRR5P85299 388 aa9.15□□□□□ -0.94
ATG4B-212ENST00000430617 SORDQ00796 357 aa9.15□□□□□ -0.94
ATG4B-212ENST00000430617 TRAP1Q12931 704 aaKnown RBP9.15□□□□□ -0.94
ATG4B-212ENST00000430617 TP53BP2Q13625 1128 aa9.15□□□□□ -0.94
ATG4B-212ENST00000430617 SERTAD2Q14140 314 aa9.15□□□□□ -0.94
ATG4B-212ENST00000430617 FLOT2Q14254 428 aa9.15□□□□□ -0.94
ATG4B-212ENST00000430617 ACKR1Q16570 336 aa9.15□□□□□ -0.94
ATG4B-212ENST00000430617 CHRFAM7AQ494W8 412 aa9.15□□□□□ -0.94
ATG4B-212ENST00000430617 SPDYE7PQ495Y7 208 aa9.15□□□□□ -0.94
ATG4B-212ENST00000430617 WLSQ5T9L3 541 aa9.15□□□□□ -0.94
ATG4B-212ENST00000430617 C6orf120Q7Z4R8 191 aa9.15□□□□□ -0.94
ATG4B-212ENST00000430617 GALNT12Q8IXK2 581 aa9.15□□□□□ -0.94
ATG4B-212ENST00000430617 PSD4Q8NDX1 1056 aa9.15□□□□□ -0.94
ATG4B-212ENST00000430617 PLPP5Q8NEB5 264 aa9.15□□□□□ -0.94
ATG4B-212ENST00000430617 ADCY4Q8NFM4 1077 aa9.15□□□□□ -0.94
ATG4B-212ENST00000430617 JADE3Q92613 823 aa9.15□□□□□ -0.94
ATG4B-212ENST00000430617 HOXB13Q92826 284 aaPredicted RBP9.15□□□□□ -0.94
ATG4B-212ENST00000430617 KAT2AQ92830 837 aa9.15□□□□□ -0.94
ATG4B-212ENST00000430617 DACH2Q96NX9 599 aa9.15□□□□□ -0.94
ATG4B-212ENST00000430617 ECSITQ9BQ95 431 aa9.15□□□□□ -0.94
ATG4B-212ENST00000430617 RAD21L1Q9H4I0 556 aa9.15□□□□□ -0.94
ATG4B-212ENST00000430617 TMEM38AQ9H6F2 299 aa9.15□□□□□ -0.94
ATG4B-212ENST00000430617 ANKRA2Q9H9E1 313 aa9.15□□□□□ -0.94
ATG4B-212ENST00000430617 UBTD1Q9HAC8 227 aa9.15□□□□□ -0.94
ATG4B-212ENST00000430617 CXorf21Q9HAI6 301 aa9.15□□□□□ -0.94
ATG4B-212ENST00000430617 DDX18Q9NVP1 670 aaKnown RBP9.15□□□□□ -0.94
ATG4B-212ENST00000430617 ACTR3BQ9P1U1 418 aa9.15□□□□□ -0.94
ATG4B-212ENST00000430617 MAGEL2Q9UJ55 1249 aa9.15□□□□□ -0.94
ATG4B-212ENST00000430617 C19orf53Q9UNZ5 99 aaPredicted RBP9.15□□□□□ -0.94
ATG4B-212ENST00000430617 NUP214P35658 2090 aaPredicted RBP9.14□□□□□ -0.95
ATG4B-212ENST00000430617 TCRBV5S2A0A599 114 aa9.14□□□□□ -0.95
ATG4B-212ENST00000430617 ELOVL7A1L3X0 281 aa9.14□□□□□ -0.95
ATG4B-212ENST00000430617 SH3D21A4FU49 640 aa9.14□□□□□ -0.95
ATG4B-212ENST00000430617 ACOT7O00154 380 aa9.14□□□□□ -0.95
ATG4B-212ENST00000430617 SUSD5O60279 629 aa9.14□□□□□ -0.95
ATG4B-212ENST00000430617 OR10H2O60403 315 aa9.14□□□□□ -0.95
ATG4B-212ENST00000430617 ENTPD5O75356 428 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms