RNA–Protein interactions for RNA: ENST00000427755.2

DEPDC7-203, Transcript of DEP domain containing 7, humanhuman

TSL 2

Gene DEPDC7, Length 1,212 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-203ENST00000427755 ZNF704Q6ZNC4 412 aaPredicted RBP11.65□□□□□ -0.54
DEPDC7-203ENST00000427755 BEND4Q6ZU67 534 aa11.65□□□□□ -0.54
DEPDC7-203ENST00000427755 R3HCC1LQ7Z5L2 792 aaKnown RBP11.65□□□□□ -0.54
DEPDC7-203ENST00000427755 OR7A2PQ8NGA2 310 aa11.65□□□□□ -0.54
DEPDC7-203ENST00000427755 PSMA8Q8TAA3 256 aa11.65□□□□□ -0.54
DEPDC7-203ENST00000427755 RNF128Q8TEB7 428 aa11.65□□□□□ -0.54
DEPDC7-203ENST00000427755 JADE3Q92613 823 aa11.65□□□□□ -0.54
DEPDC7-203ENST00000427755 CDS1Q92903 461 aa11.65□□□□□ -0.54
DEPDC7-203ENST00000427755 ZNF524Q96C55 264 aa11.65□□□□□ -0.54
DEPDC7-203ENST00000427755 KLHL15Q96M94 604 aa11.65□□□□□ -0.54
DEPDC7-203ENST00000427755 STACQ99469 402 aa11.65□□□□□ -0.54
DEPDC7-203ENST00000427755 BDH2Q9BUT1 245 aa11.65□□□□□ -0.54
DEPDC7-203ENST00000427755 SRXN1Q9BYN0 137 aa11.65□□□□□ -0.54
DEPDC7-203ENST00000427755 ACTR6Q9GZN1 396 aa11.65□□□□□ -0.54
DEPDC7-203ENST00000427755 OR10A4Q9H209 315 aa11.65□□□□□ -0.54
DEPDC7-203ENST00000427755 PIGUQ9H490 435 aa11.65□□□□□ -0.54
DEPDC7-203ENST00000427755 ZCCHC3Q9NUD5 404 aaKnown RBP11.65□□□□□ -0.54
DEPDC7-203ENST00000427755 MKS1Q9NXB0 559 aa11.65□□□□□ -0.54
DEPDC7-203ENST00000427755 GIMAP2Q9UG22 337 aa11.65□□□□□ -0.54
DEPDC7-203ENST00000427755 GPR52Q9Y2T5 361 aa11.65□□□□□ -0.54
DEPDC7-203ENST00000427755 TRAF6Q9Y4K3 522 aa11.65□□□□□ -0.54
DEPDC7-203ENST00000427755 NPHS1O60500 1241 aa11.64□□□□□ -0.55
DEPDC7-203ENST00000427755 HSPA4LO95757 839 aa11.64□□□□□ -0.55
DEPDC7-203ENST00000427755 TUBBP07437 444 aa11.64□□□□□ -0.55
DEPDC7-203ENST00000427755 LAMP1P11279 417 aa11.64□□□□□ -0.55
DEPDC7-203ENST00000427755 ME2P23368 584 aa11.64□□□□□ -0.55
DEPDC7-203ENST00000427755 ELK4P28324 431 aa11.64□□□□□ -0.55
DEPDC7-203ENST00000427755 ARRB2P32121 409 aa11.64□□□□□ -0.55
DEPDC7-203ENST00000427755 NR1H2P55055 460 aa11.64□□□□□ -0.55
DEPDC7-203ENST00000427755 CARD18P57730 90 aa11.64□□□□□ -0.55
DEPDC7-203ENST00000427755 ZNF239Q16600 458 aaKnown RBP11.64□□□□□ -0.55
DEPDC7-203ENST00000427755 KLHL26Q53HC5 615 aa11.64□□□□□ -0.55
DEPDC7-203ENST00000427755 XKR7Q5GH72 579 aa11.64□□□□□ -0.55
DEPDC7-203ENST00000427755 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.64□□□□□ -0.55
DEPDC7-203ENST00000427755 PDSS1Q5T2R2 415 aa11.64□□□□□ -0.55
DEPDC7-203ENST00000427755 CDC73Q6P1J9 531 aa11.64□□□□□ -0.55
DEPDC7-203ENST00000427755 LRIG3Q6UXM1 1119 aa11.64□□□□□ -0.55
DEPDC7-203ENST00000427755 PLEKHM3Q6ZWE6 761 aa11.64□□□□□ -0.55
DEPDC7-203ENST00000427755 DDIASQ8IXT1 998 aa11.64□□□□□ -0.55
DEPDC7-203ENST00000427755 LILRA2Q8N149 483 aa11.64□□□□□ -0.55
DEPDC7-203ENST00000427755 BANPQ8N9N5 519 aa11.64□□□□□ -0.55
DEPDC7-203ENST00000427755 ABHD3Q8WU67 409 aa11.64□□□□□ -0.55
DEPDC7-203ENST00000427755 NUDT8Q8WV74 236 aa11.64□□□□□ -0.55
DEPDC7-203ENST00000427755 ROBO4Q8WZ75 1007 aa11.64□□□□□ -0.55
DEPDC7-203ENST00000427755 PLPPR2Q96GM1 343 aa11.64□□□□□ -0.55
DEPDC7-203ENST00000427755 MECRQ9BV79 373 aa11.64□□□□□ -0.55
DEPDC7-203ENST00000427755 ZNF701Q9NV72 531 aaPredicted RBP11.64□□□□□ -0.55
DEPDC7-203ENST00000427755 GPATCH2Q9NW75 528 aa11.64□□□□□ -0.55
DEPDC7-203ENST00000427755 ICAM5Q9UMF0 924 aa11.64□□□□□ -0.55
DEPDC7-203ENST00000427755 ACTL7BQ9Y614 415 aa11.64□□□□□ -0.55
DEPDC7-203ENST00000427755 KCNE3Q9Y6H6 103 aa11.64□□□□□ -0.55
DEPDC7-203ENST00000427755 UQCRHLA0A096LP55 91 aa11.63□□□□□ -0.55
DEPDC7-203ENST00000427755 NPIPA5A0A0B4J1W7 369 aa11.63□□□□□ -0.55
DEPDC7-203ENST00000427755 NPIPA7E9PJI5 369 aa11.63□□□□□ -0.55
DEPDC7-203ENST00000427755 NPIPB9F8W1W9 429 aa11.63□□□□□ -0.55
DEPDC7-203ENST00000427755 ZNF195O14628 629 aa11.63□□□□□ -0.55
DEPDC7-203ENST00000427755 HS3ST1O14792 307 aa11.63□□□□□ -0.55
DEPDC7-203ENST00000427755 SMAD7O15105 426 aaKnown RBP11.63□□□□□ -0.55
DEPDC7-203ENST00000427755 GCM2O75603 506 aaPredicted RBP11.63□□□□□ -0.55
DEPDC7-203ENST00000427755 CNOT4O95628 575 aaKnown RBP11.63□□□□□ -0.55
DEPDC7-203ENST00000427755 NTN1O95631 604 aa11.63□□□□□ -0.55
DEPDC7-203ENST00000427755 NPIPA8P0DM63 369 aa11.63□□□□□ -0.55
DEPDC7-203ENST00000427755 ADH6P28332 368 aa11.63□□□□□ -0.55
DEPDC7-203ENST00000427755 SFTPDP35247 375 aa11.63□□□□□ -0.55
DEPDC7-203ENST00000427755 HPCAL1P37235 193 aa11.63□□□□□ -0.55
DEPDC7-203ENST00000427755 EIF1P41567 113 aaKnown RBP11.63□□□□□ -0.55
DEPDC7-203ENST00000427755 RNF144AP50876 292 aaPredicted RBP11.63□□□□□ -0.55
DEPDC7-203ENST00000427755 CAPRIN1Q14444 709 aaKnown RBP11.63□□□□□ -0.55
DEPDC7-203ENST00000427755 PTGR1Q14914 329 aa11.63□□□□□ -0.55
DEPDC7-203ENST00000427755 TOMM34Q15785 309 aaPredicted RBP11.63□□□□□ -0.55
DEPDC7-203ENST00000427755 GTF2IRD2BQ6EKJ0 949 aa11.63□□□□□ -0.55
DEPDC7-203ENST00000427755 TFAP2EQ6VUC0 442 aa11.63□□□□□ -0.55
DEPDC7-203ENST00000427755 NUFIP2Q7Z417 695 aaKnown RBP11.63□□□□□ -0.55
DEPDC7-203ENST00000427755 MTERF4Q7Z6M4 381 aaKnown RBP11.63□□□□□ -0.55
DEPDC7-203ENST00000427755 GTF2IRD2Q86UP8 949 aa11.63□□□□□ -0.55
DEPDC7-203ENST00000427755 PRIMA1Q86XR5 153 aa11.63□□□□□ -0.55
DEPDC7-203ENST00000427755 WFDC8Q8IUA0 241 aa11.63□□□□□ -0.55
DEPDC7-203ENST00000427755 GABRG1Q8N1C3 465 aa11.63□□□□□ -0.55
DEPDC7-203ENST00000427755 ZNF611Q8N823 705 aa11.63□□□□□ -0.55
DEPDC7-203ENST00000427755 FBXO27Q8NI29 283 aa11.63□□□□□ -0.55
DEPDC7-203ENST00000427755 PHOSPHO1Q8TCT1 267 aa11.63□□□□□ -0.55
DEPDC7-203ENST00000427755 OR5P2Q8WZ92 322 aa11.63□□□□□ -0.55
DEPDC7-203ENST00000427755 APOPT1Q96IL0 206 aa11.63□□□□□ -0.55
DEPDC7-203ENST00000427755 PPP3R2Q96LZ3 170 aa11.63□□□□□ -0.55
DEPDC7-203ENST00000427755 C3orf30Q96M34 536 aa11.63□□□□□ -0.55
DEPDC7-203ENST00000427755 C12orf49Q9H741 205 aa11.63□□□□□ -0.55
DEPDC7-203ENST00000427755 CXorf36Q9H7Y0 433 aa11.63□□□□□ -0.55
DEPDC7-203ENST00000427755 COQ10BQ9H8M1 238 aa11.63□□□□□ -0.55
DEPDC7-203ENST00000427755 SLC17A7Q9P2U7 560 aa11.63□□□□□ -0.55
DEPDC7-203ENST00000427755 SNX8Q9Y5X2 465 aa11.63□□□□□ -0.55
DEPDC7-203ENST00000427755 NSD1Q96L73 2696 aaPredicted RBP11.63□□□□□ -0.55
DEPDC7-203ENST00000427755 ARID1AO14497 2285 aa11.62□□□□□ -0.55
DEPDC7-203ENST00000427755 PCNX3Q9H6A9 2034 aa11.62□□□□□ -0.55
DEPDC7-203ENST00000427755 TMEM114B3SHH9 223 aa11.62□□□□□ -0.55
DEPDC7-203ENST00000427755 TMCC2O75069 709 aa11.62□□□□□ -0.55
DEPDC7-203ENST00000427755 PEX11AO75192 247 aa11.62□□□□□ -0.55
DEPDC7-203ENST00000427755 DDX5P17844 614 aaKnown RBP11.62□□□□□ -0.55
DEPDC7-203ENST00000427755 ATP6V1C1P21283 382 aa11.62□□□□□ -0.55
DEPDC7-203ENST00000427755 CCT3P49368 545 aaKnown RBP11.62□□□□□ -0.55
DEPDC7-203ENST00000427755 P2RX1P51575 399 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms