RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 ZNF524Q96C55 264 aa12.3□□□□□ -0.44
SNX3-204ENST00000426155 TRIM8Q9BZR9 551 aa12.3□□□□□ -0.44
SNX3-204ENST00000426155 KCNJ16Q9NPI9 418 aa12.3□□□□□ -0.44
SNX3-204ENST00000426155 MED17Q9NVC6 651 aa12.3□□□□□ -0.44
SNX3-204ENST00000426155 ZIM2Q9NZV7 527 aa12.3□□□□□ -0.44
SNX3-204ENST00000426155 CLCF1Q9UBD9 225 aa12.3□□□□□ -0.44
SNX3-204ENST00000426155 CARD8Q9Y2G2 431 aa12.3□□□□□ -0.44
SNX3-204ENST00000426155 HSPB2A8KAH6 182 aa12.29□□□□□ -0.44
SNX3-204ENST00000426155 BCAS1O75363 584 aaPredicted RBP12.29□□□□□ -0.44
SNX3-204ENST00000426155 TGM6O95932 706 aa12.29□□□□□ -0.44
SNX3-204ENST00000426155 IL11P20809 199 aa12.29□□□□□ -0.44
SNX3-204ENST00000426155 LCN1P31025 176 aa12.29□□□□□ -0.44
SNX3-204ENST00000426155 TIMP3P35625 211 aa12.29□□□□□ -0.44
SNX3-204ENST00000426155 KHKP50053 298 aa12.29□□□□□ -0.44
SNX3-204ENST00000426155 POLR2JP52435 117 aaKnown RBP12.29□□□□□ -0.44
SNX3-204ENST00000426155 ATP12AP54707 1039 aa12.29□□□□□ -0.44
SNX3-204ENST00000426155 FOXF1Q12946 379 aa12.29□□□□□ -0.44
SNX3-204ENST00000426155 TOMM34Q15785 309 aaPredicted RBP12.29□□□□□ -0.44
SNX3-204ENST00000426155 HSPB2Q16082 182 aa12.29□□□□□ -0.44
SNX3-204ENST00000426155 MAPK14Q16539 360 aa12.29□□□□□ -0.44
SNX3-204ENST00000426155 TMEM44Q2T9K0 475 aa12.29□□□□□ -0.44
SNX3-204ENST00000426155 PLPPR5Q32ZL2 321 aa12.29□□□□□ -0.44
SNX3-204ENST00000426155 ARHGAP11BQ3KRB8 267 aa12.29□□□□□ -0.44
SNX3-204ENST00000426155 HEPHL1Q6MZM0 1159 aa12.29□□□□□ -0.44
SNX3-204ENST00000426155 ZNF621Q6ZSS3 439 aa12.29□□□□□ -0.44
SNX3-204ENST00000426155 MIER2Q8N344 545 aa12.29□□□□□ -0.44
SNX3-204ENST00000426155 ACBD4Q8NC06 268 aa12.29□□□□□ -0.44
SNX3-204ENST00000426155 GLB1L3Q8NCI6 653 aaPredicted RBP12.29□□□□□ -0.44
SNX3-204ENST00000426155 B4GALNT2Q8NHY0 566 aa12.29□□□□□ -0.44
SNX3-204ENST00000426155 RFWD2Q8NHY2 731 aa12.29□□□□□ -0.44
SNX3-204ENST00000426155 POC1BQ8TC44 478 aa12.29□□□□□ -0.44
SNX3-204ENST00000426155 XAGE5Q8WWM1 108 aa12.29□□□□□ -0.44
SNX3-204ENST00000426155 DTNBP1Q96EV8 351 aa12.29□□□□□ -0.44
SNX3-204ENST00000426155 AURKBQ96GD4 344 aaPredicted RBP12.29□□□□□ -0.44
SNX3-204ENST00000426155 ZNF845Q96IR2 970 aaPredicted RBP12.29□□□□□ -0.44
SNX3-204ENST00000426155 MAGEB18Q96M61 343 aa12.29□□□□□ -0.44
SNX3-204ENST00000426155 RNF145Q96MT1 663 aa12.29□□□□□ -0.44
SNX3-204ENST00000426155 KCNK17Q96T54 332 aa12.29□□□□□ -0.44
SNX3-204ENST00000426155 PIGQQ9BRB3 760 aa12.29□□□□□ -0.44
SNX3-204ENST00000426155 ZNF350Q9GZX5 532 aa12.29□□□□□ -0.44
SNX3-204ENST00000426155 QRSL1Q9H0R6 528 aaKnown RBP12.29□□□□□ -0.44
SNX3-204ENST00000426155 TMEM185BQ9H7F4 350 aa12.29□□□□□ -0.44
SNX3-204ENST00000426155 DUXAA6NLW8 204 aa12.28□□□□□ -0.44
SNX3-204ENST00000426155 FAM47E-STBD1D6RA91 191 aa12.28□□□□□ -0.44
SNX3-204ENST00000426155 HMGN4O00479 90 aa12.28□□□□□ -0.44
SNX3-204ENST00000426155 RFXANKO14593 260 aa12.28□□□□□ -0.44
SNX3-204ENST00000426155 KIAA0513O60268 411 aa12.28□□□□□ -0.44
SNX3-204ENST00000426155 STX11O75558 287 aa12.28□□□□□ -0.44
SNX3-204ENST00000426155 UGT2B17O75795 530 aa12.28□□□□□ -0.44
SNX3-204ENST00000426155 IL2RAP01589 272 aa12.28□□□□□ -0.44
SNX3-204ENST00000426155 IL6P05231 212 aa12.28□□□□□ -0.44
SNX3-204ENST00000426155 PEPDP12955 493 aa12.28□□□□□ -0.44
SNX3-204ENST00000426155 IGFBP2P18065 325 aa12.28□□□□□ -0.44
SNX3-204ENST00000426155 ZNF41P51814 821 aaPredicted RBP12.28□□□□□ -0.44
SNX3-204ENST00000426155 SYPL1Q16563 259 aa12.28□□□□□ -0.44
SNX3-204ENST00000426155 TYW3Q6IPR3 259 aaKnown RBP12.28□□□□□ -0.44
SNX3-204ENST00000426155 SLC2A7Q6PXP3 512 aa12.28□□□□□ -0.44
SNX3-204ENST00000426155 FRRS1Q6ZNA5 592 aa12.28□□□□□ -0.44
SNX3-204ENST00000426155 GGNQ86UU5 652 aa12.28□□□□□ -0.44
SNX3-204ENST00000426155 MISPQ8IVT2 679 aa12.28□□□□□ -0.44
SNX3-204ENST00000426155 ZNF295-AS1Q8N0V1 137 aa12.28□□□□□ -0.44
SNX3-204ENST00000426155 TMCO5AQ8N6Q1 288 aa12.28□□□□□ -0.44
SNX3-204ENST00000426155 ANKFN1Q8N957 763 aa12.28□□□□□ -0.44
SNX3-204ENST00000426155 ZNF454Q8N9F8 522 aa12.28□□□□□ -0.44
SNX3-204ENST00000426155 ZNF527Q8NB42 609 aa12.28□□□□□ -0.44
SNX3-204ENST00000426155 FIG4Q92562 907 aa12.28□□□□□ -0.44
SNX3-204ENST00000426155 ROPN1LQ96C74 230 aa12.28□□□□□ -0.44
SNX3-204ENST00000426155 PINK1Q9BXM7 581 aa12.28□□□□□ -0.44
SNX3-204ENST00000426155 ENKD1Q9H0I2 346 aa12.28□□□□□ -0.44
SNX3-204ENST00000426155 CALHM2Q9HA72 323 aa12.28□□□□□ -0.44
SNX3-204ENST00000426155 EXD2Q9NVH0 621 aa12.28□□□□□ -0.44
SNX3-204ENST00000426155 ICAM5Q9UMF0 924 aa12.28□□□□□ -0.44
SNX3-204ENST00000426155 L3MBTL1Q9Y468 752 aa12.28□□□□□ -0.44
SNX3-204ENST00000426155 DTNAQ9Y4J8 743 aa12.28□□□□□ -0.44
SNX3-204ENST00000426155 TACC2O95359 2948 aa12.27□□□□□ -0.44
SNX3-204ENST00000426155 GTPBP1O00178 669 aaKnown RBP12.27□□□□□ -0.45
SNX3-204ENST00000426155 DVL2O14641 736 aa12.27□□□□□ -0.45
SNX3-204ENST00000426155 CYP7B1O75881 506 aa12.27□□□□□ -0.45
SNX3-204ENST00000426155 NUDT14O95848 222 aa12.27□□□□□ -0.45
SNX3-204ENST00000426155 AK1P00568 194 aa12.27□□□□□ -0.45
SNX3-204ENST00000426155 LINGO3P0C6S8 592 aa12.27□□□□□ -0.45
SNX3-204ENST00000426155 TMIGD3P0DMS9 266 aaPredicted RBP12.27□□□□□ -0.45
SNX3-204ENST00000426155 UBL4AP11441 157 aa12.27□□□□□ -0.45
SNX3-204ENST00000426155 ZNF17P17021 662 aa12.27□□□□□ -0.45
SNX3-204ENST00000426155 PSMA4P25789 261 aaKnown RBP12.27□□□□□ -0.45
SNX3-204ENST00000426155 SHC1P29353 583 aa12.27□□□□□ -0.45
SNX3-204ENST00000426155 CCR4P51679 360 aa12.27□□□□□ -0.45
SNX3-204ENST00000426155 MVDP53602 400 aa12.27□□□□□ -0.45
SNX3-204ENST00000426155 DLX5P56178 289 aa12.27□□□□□ -0.45
SNX3-204ENST00000426155 PLAURQ03405 335 aa12.27□□□□□ -0.45
SNX3-204ENST00000426155 SF3B4Q15427 424 aaKnown RBP eCLIP12.27□□□□□ -0.45
SNX3-204ENST00000426155 SLC25A35Q3KQZ1 300 aa12.27□□□□□ -0.45
SNX3-204ENST00000426155 GPAT3Q53EU6 434 aa12.27□□□□□ -0.45
SNX3-204ENST00000426155 ATAD3BQ5T9A4 648 aa12.27□□□□□ -0.45
SNX3-204ENST00000426155 GRAMD2AQ8IUY3 354 aa12.27□□□□□ -0.45
SNX3-204ENST00000426155 FUNDC1Q8IVP5 155 aa12.27□□□□□ -0.45
SNX3-204ENST00000426155 GTPBP8Q8N3Z3 284 aaPredicted RBP12.27□□□□□ -0.45
SNX3-204ENST00000426155 MEIOBQ8N635 442 aa12.27□□□□□ -0.45
SNX3-204ENST00000426155 TRIML2Q8N7C3 387 aa12.27□□□□□ -0.45
SNX3-204ENST00000426155 ZFP90Q8TF47 636 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms