RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 FZD5Q13467 585 aa13.47□□□□□ -0.25
HLA-DPA1-242ENST00000419277 DEFB110Q30KQ9 67 aa13.47□□□□□ -0.25
HLA-DPA1-242ENST00000419277 ANKDD1AQ495B1 522 aa13.47□□□□□ -0.25
HLA-DPA1-242ENST00000419277 PLK5Q496M5 336 aa13.47□□□□□ -0.25
HLA-DPA1-242ENST00000419277 WDR45BQ5MNZ6 344 aa13.47□□□□□ -0.25
HLA-DPA1-242ENST00000419277 ULK3Q6PHR2 472 aa13.47□□□□□ -0.25
HLA-DPA1-242ENST00000419277 ZNF761Q86XN6 746 aaPredicted RBP13.47□□□□□ -0.25
HLA-DPA1-242ENST00000419277 ZNF527Q8NB42 609 aa13.47□□□□□ -0.25
HLA-DPA1-242ENST00000419277 SLC2A12Q8TD20 617 aa13.47□□□□□ -0.25
HLA-DPA1-242ENST00000419277 DNASE2BQ8WZ79 361 aa13.47□□□□□ -0.25
HLA-DPA1-242ENST00000419277 HLA-CQ95604 372 aa13.47□□□□□ -0.25
HLA-DPA1-242ENST00000419277 BPIFA2Q96DR5 249 aa13.47□□□□□ -0.25
HLA-DPA1-242ENST00000419277 ART5Q96L15 291 aa13.47□□□□□ -0.25
HLA-DPA1-242ENST00000419277 CCDC32Q9BV29 185 aa13.47□□□□□ -0.25
HLA-DPA1-242ENST00000419277 ALOXE3Q9BYJ1 711 aa13.47□□□□□ -0.25
HLA-DPA1-242ENST00000419277 C6orf62Q9GZU0 229 aaPredicted RBP13.47□□□□□ -0.25
HLA-DPA1-242ENST00000419277 NUAK2Q9H093 628 aa13.47□□□□□ -0.25
HLA-DPA1-242ENST00000419277 UBQLN3Q9H347 655 aa13.47□□□□□ -0.25
HLA-DPA1-242ENST00000419277 SP140LQ9H930 580 aa13.47□□□□□ -0.25
HLA-DPA1-242ENST00000419277 CMC2Q9NRP2 79 aa13.47□□□□□ -0.25
HLA-DPA1-242ENST00000419277 TMEM74BQ9NUR3 256 aa13.47□□□□□ -0.25
HLA-DPA1-242ENST00000419277 TAS2R16Q9NYV7 291 aa13.47□□□□□ -0.25
HLA-DPA1-242ENST00000419277 SEMA5BQ9P283 1151 aa13.47□□□□□ -0.25
HLA-DPA1-242ENST00000419277 CA14Q9ULX7 337 aa13.47□□□□□ -0.25
HLA-DPA1-242ENST00000419277 GSTK1Q9Y2Q3 226 aa13.47□□□□□ -0.25
HLA-DPA1-242ENST00000419277 CCDC85CA6NKD9 419 aa13.46□□□□□ -0.25
HLA-DPA1-242ENST00000419277 RHPN2P1A8MT19 583 aa13.46□□□□□ -0.25
HLA-DPA1-242ENST00000419277 PEX12O00623 359 aa13.46□□□□□ -0.25
HLA-DPA1-242ENST00000419277 DSCR3O14972 297 aa13.46□□□□□ -0.25
HLA-DPA1-242ENST00000419277 DUX1O43812 170 aa13.46□□□□□ -0.25
HLA-DPA1-242ENST00000419277 UPK1BO75841 260 aa13.46□□□□□ -0.25
HLA-DPA1-242ENST00000419277 LYPD3O95274 346 aa13.46□□□□□ -0.25
HLA-DPA1-242ENST00000419277 IFNGP01579 166 aa13.46□□□□□ -0.25
HLA-DPA1-242ENST00000419277 CD53P19397 219 aa13.46□□□□□ -0.25
HLA-DPA1-242ENST00000419277 FGF9P31371 208 aaPredicted RBP13.46□□□□□ -0.25
HLA-DPA1-242ENST00000419277 ADH7P40394 386 aa13.46□□□□□ -0.25
HLA-DPA1-242ENST00000419277 AFF3P51826 1226 aaKnown RBP13.46□□□□□ -0.25
HLA-DPA1-242ENST00000419277 SLC30A6Q6NXT4 461 aa13.46□□□□□ -0.25
HLA-DPA1-242ENST00000419277 ARHGAP11AQ6P4F7 1023 aa13.46□□□□□ -0.25
HLA-DPA1-242ENST00000419277 FIGNL1Q6PIW4 674 aa13.46□□□□□ -0.25
HLA-DPA1-242ENST00000419277 SMARCD3Q6STE5 483 aa13.46□□□□□ -0.25
HLA-DPA1-242ENST00000419277 HMGN2P46Q86SG4 172 aa13.46□□□□□ -0.25
HLA-DPA1-242ENST00000419277 KLHL36Q8N4N3 616 aa13.46□□□□□ -0.25
HLA-DPA1-242ENST00000419277 C1orf216Q8TAB5 229 aa13.46□□□□□ -0.25
HLA-DPA1-242ENST00000419277 RLN3Q8WXF3 142 aa13.46□□□□□ -0.25
HLA-DPA1-242ENST00000419277 AP3S1Q92572 193 aa13.46□□□□□ -0.25
HLA-DPA1-242ENST00000419277 PEX11GQ96HA9 241 aa13.46□□□□□ -0.25
HLA-DPA1-242ENST00000419277 ARHGAP9Q9BRR9 750 aa13.46□□□□□ -0.25
HLA-DPA1-242ENST00000419277 DAPK2Q9UIK4 370 aa13.46□□□□□ -0.25
HLA-DPA1-242ENST00000419277 KCNE5Q9UJ90 142 aa13.46□□□□□ -0.25
HLA-DPA1-242ENST00000419277 TMEM150CB9EJG8 249 aa13.45□□□□□ -0.26
HLA-DPA1-242ENST00000419277 BHLHE40O14503 412 aa13.45□□□□□ -0.26
HLA-DPA1-242ENST00000419277 PPM1BO75688 479 aa13.45□□□□□ -0.26
HLA-DPA1-242ENST00000419277 PIAS2O75928 621 aa13.45□□□□□ -0.26
HLA-DPA1-242ENST00000419277 IFI30P13284 250 aa13.45□□□□□ -0.26
HLA-DPA1-242ENST00000419277 SLC1A3P43003 542 aa13.45□□□□□ -0.26
HLA-DPA1-242ENST00000419277 CRYBB2P43320 205 aa13.45□□□□□ -0.26
HLA-DPA1-242ENST00000419277 FNTBP49356 437 aa13.45□□□□□ -0.26
HLA-DPA1-242ENST00000419277 DCAF7P61962 342 aa13.45□□□□□ -0.26
HLA-DPA1-242ENST00000419277 HSD11B2P80365 405 aa13.45□□□□□ -0.26
HLA-DPA1-242ENST00000419277 CD200R1LQ6Q8B3 271 aa13.45□□□□□ -0.26
HLA-DPA1-242ENST00000419277 TMPRSS11AQ6ZMR5 421 aa13.45□□□□□ -0.26
HLA-DPA1-242ENST00000419277 PLEKHG7Q6ZR37 379 aa13.45□□□□□ -0.26
HLA-DPA1-242ENST00000419277 RTL4Q6ZR62 310 aa13.45□□□□□ -0.26
HLA-DPA1-242ENST00000419277 QSOX2Q6ZRP7 698 aa13.45□□□□□ -0.26
HLA-DPA1-242ENST00000419277 CXXC5Q7LFL8 322 aaKnown RBP13.45□□□□□ -0.26
HLA-DPA1-242ENST00000419277 ZNF554Q86TJ5 538 aa13.45□□□□□ -0.26
HLA-DPA1-242ENST00000419277 TMEFF1Q8IYR6 380 aa13.45□□□□□ -0.26
HLA-DPA1-242ENST00000419277 FAM160A2Q8N612 972 aaPredicted RBP13.45□□□□□ -0.26
HLA-DPA1-242ENST00000419277 OR4Q3Q8NH05 313 aa13.45□□□□□ -0.26
HLA-DPA1-242ENST00000419277 CLDN23Q96B33 292 aa13.45□□□□□ -0.26
HLA-DPA1-242ENST00000419277 KCTD7Q96MP8 289 aa13.45□□□□□ -0.26
HLA-DPA1-242ENST00000419277 WDFY2Q96P53 400 aa13.45□□□□□ -0.26
HLA-DPA1-242ENST00000419277 CPNE5Q9HCH3 593 aa13.45□□□□□ -0.26
HLA-DPA1-242ENST00000419277 EXOSC3Q9NQT5 275 aaKnown RBP13.45□□□□□ -0.26
HLA-DPA1-242ENST00000419277 IRAK4Q9NWZ3 460 aa13.45□□□□□ -0.26
HLA-DPA1-242ENST00000419277 DNAJB12Q9NXW2 375 aaKnown RBP13.45□□□□□ -0.26
HLA-DPA1-242ENST00000419277 HCN3Q9P1Z3 774 aa13.45□□□□□ -0.26
HLA-DPA1-242ENST00000419277 CLEC2DQ9UHP7 191 aa13.45□□□□□ -0.26
HLA-DPA1-242ENST00000419277 POLHQ9Y253 713 aa13.45□□□□□ -0.26
HLA-DPA1-242ENST00000419277 CAB39Q9Y376 341 aaPredicted RBP13.45□□□□□ -0.26
HLA-DPA1-242ENST00000419277 TOX3O15405 576 aaPredicted RBP13.44□□□□□ -0.26
HLA-DPA1-242ENST00000419277 PTTG1O95997 202 aa13.44□□□□□ -0.26
HLA-DPA1-242ENST00000419277 ZNF3P17036 446 aa13.44□□□□□ -0.26
HLA-DPA1-242ENST00000419277 SLC6A6P31641 620 aa13.44□□□□□ -0.26
HLA-DPA1-242ENST00000419277 DEFA1P59665 94 aa13.44□□□□□ -0.26
HLA-DPA1-242ENST00000419277 DEFA3P59666 94 aa13.44□□□□□ -0.26
HLA-DPA1-242ENST00000419277 ACTC1P68032 377 aa13.44□□□□□ -0.26
HLA-DPA1-242ENST00000419277 ACTA1P68133 377 aa13.44□□□□□ -0.26
HLA-DPA1-242ENST00000419277 TRAM1Q15629 374 aa13.44□□□□□ -0.26
HLA-DPA1-242ENST00000419277 ISXQ2M1V0 245 aa13.44□□□□□ -0.26
HLA-DPA1-242ENST00000419277 CLEC12AQ5QGZ9 265 aa13.44□□□□□ -0.26
HLA-DPA1-242ENST00000419277 PDZK1Q5T2W1 519 aa13.44□□□□□ -0.26
HLA-DPA1-242ENST00000419277 NUP54Q7Z3B4 507 aa13.44□□□□□ -0.26
HLA-DPA1-242ENST00000419277 SFTPA2Q8IWL1 248 aa13.44□□□□□ -0.26
HLA-DPA1-242ENST00000419277 GPALPP1Q8IXQ4 340 aa13.44□□□□□ -0.26
HLA-DPA1-242ENST00000419277 SIMC1Q8NDZ2 872 aa13.44□□□□□ -0.26
HLA-DPA1-242ENST00000419277 OR51Q1Q8NH59 317 aa13.44□□□□□ -0.26
HLA-DPA1-242ENST00000419277 MMABQ96EY8 250 aaPredicted RBP13.44□□□□□ -0.26
HLA-DPA1-242ENST00000419277 AHCYL2Q96HN2 611 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms