RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 C15orf38-AP3S2A0A0A6YYH1 394 aa16.89■□□□□ 0.29
PTCD3-204ENST00000418628 EIF4E2O60573 245 aaKnown RBP16.89■□□□□ 0.29
PTCD3-204ENST00000418628 SHOX2O60902 331 aaPredicted RBP16.89■□□□□ 0.29
PTCD3-204ENST00000418628 WDR1O75083 606 aa16.89■□□□□ 0.29
PTCD3-204ENST00000418628 BCAS1O75363 584 aaPredicted RBP16.89■□□□□ 0.29
PTCD3-204ENST00000418628 ARAFP10398 606 aa16.89■□□□□ 0.29
PTCD3-204ENST00000418628 ZNF17P17021 662 aa16.89■□□□□ 0.29
PTCD3-204ENST00000418628 PSMA4P25789 261 aaKnown RBP16.89■□□□□ 0.29
PTCD3-204ENST00000418628 PGM1P36871 562 aa16.89■□□□□ 0.29
PTCD3-204ENST00000418628 LHX2P50458 406 aa16.89■□□□□ 0.29
PTCD3-204ENST00000418628 CASP6P55212 293 aa16.89■□□□□ 0.29
PTCD3-204ENST00000418628 HPCAP84074 193 aa16.89■□□□□ 0.29
PTCD3-204ENST00000418628 ADORA2A-AS1P86434 159 aa16.89■□□□□ 0.29
PTCD3-204ENST00000418628 REP15Q6BDI9 236 aa16.89■□□□□ 0.29
PTCD3-204ENST00000418628 ARSKQ6UWY0 536 aa16.89■□□□□ 0.29
PTCD3-204ENST00000418628 SNX32Q86XE0 403 aa16.89■□□□□ 0.29
PTCD3-204ENST00000418628 OR14L1PQ8NHC6 308 aa16.89■□□□□ 0.29
PTCD3-204ENST00000418628 B4GALNT2Q8NHY0 566 aa16.89■□□□□ 0.29
PTCD3-204ENST00000418628 PHOSPHO1Q8TCT1 267 aa16.89■□□□□ 0.29
PTCD3-204ENST00000418628 CCDC120Q96HB5 630 aa16.89■□□□□ 0.29
PTCD3-204ENST00000418628 TMEM19Q96HH6 336 aa16.89■□□□□ 0.29
PTCD3-204ENST00000418628 TREX2Q9BQ50 279 aaPredicted RBP16.89■□□□□ 0.29
PTCD3-204ENST00000418628 QRSL1Q9H0R6 528 aaKnown RBP16.89■□□□□ 0.29
PTCD3-204ENST00000418628 BCL2L10Q9HD36 194 aa16.89■□□□□ 0.29
PTCD3-204ENST00000418628 CORO2BQ9UQ03 480 aa16.89■□□□□ 0.29
PTCD3-204ENST00000418628 HECTD1Q9ULT8 2610 aa16.88■□□□□ 0.29
PTCD3-204ENST00000418628 A0A087WZY1 265 aa16.88■□□□□ 0.29
PTCD3-204ENST00000418628 H3BNH8 94 aa16.88■□□□□ 0.29
PTCD3-204ENST00000418628 CCL21O00585 134 aa16.88■□□□□ 0.29
PTCD3-204ENST00000418628 ZNF264O43296 627 aa16.88■□□□□ 0.29
PTCD3-204ENST00000418628 CCDC22O60826 627 aa16.88■□□□□ 0.29
PTCD3-204ENST00000418628 AGFG2O95081 481 aa16.88■□□□□ 0.29
PTCD3-204ENST00000418628 BCHEP06276 602 aa16.88■□□□□ 0.29
PTCD3-204ENST00000418628 LINGO3P0C6S8 592 aa16.88■□□□□ 0.29
PTCD3-204ENST00000418628 NR2F1P10589 423 aa16.88■□□□□ 0.29
PTCD3-204ENST00000418628 UBL4AP11441 157 aa16.88■□□□□ 0.29
PTCD3-204ENST00000418628 CPN1P15169 458 aa16.88■□□□□ 0.29
PTCD3-204ENST00000418628 ZNF708P17019 499 aa16.88■□□□□ 0.29
PTCD3-204ENST00000418628 HK1P19367 917 aa16.88■□□□□ 0.29
PTCD3-204ENST00000418628 P2RX1P51575 399 aa16.88■□□□□ 0.29
PTCD3-204ENST00000418628 CRISP3P54108 245 aa16.88■□□□□ 0.29
PTCD3-204ENST00000418628 CLDN18P56856 261 aa16.88■□□□□ 0.29
PTCD3-204ENST00000418628 SELPLGQ14242 412 aa16.88■□□□□ 0.29
PTCD3-204ENST00000418628 TOMM20Q15388 145 aa16.88■□□□□ 0.29
PTCD3-204ENST00000418628 ADRM1Q16186 407 aa16.88■□□□□ 0.29
PTCD3-204ENST00000418628 NDUFAF6Q330K2 333 aa16.88■□□□□ 0.29
PTCD3-204ENST00000418628 NET1Q7Z628 596 aaPredicted RBP16.88■□□□□ 0.29
PTCD3-204ENST00000418628 TREML1Q86YW5 311 aa16.88■□□□□ 0.29
PTCD3-204ENST00000418628 GTPBP8Q8N3Z3 284 aaPredicted RBP16.88■□□□□ 0.29
PTCD3-204ENST00000418628 RPRMLQ8N4K4 120 aa16.88■□□□□ 0.29
PTCD3-204ENST00000418628 SSC4DQ8WTU2 575 aa16.88■□□□□ 0.29
PTCD3-204ENST00000418628 ABTB1Q969K4 478 aaPredicted RBP16.88■□□□□ 0.29
PTCD3-204ENST00000418628 WDYHV1Q96HA8 205 aa16.88■□□□□ 0.29
PTCD3-204ENST00000418628 SH3YL1Q96HL8 342 aaPredicted RBP16.88■□□□□ 0.29
PTCD3-204ENST00000418628 NPAS1Q99742 590 aa16.88■□□□□ 0.29
PTCD3-204ENST00000418628 FAM107BQ9H098 131 aa16.88■□□□□ 0.29
PTCD3-204ENST00000418628 TMEM38AQ9H6F2 299 aa16.88■□□□□ 0.29
PTCD3-204ENST00000418628 EXO5Q9H790 373 aa16.88■□□□□ 0.29
PTCD3-204ENST00000418628 MED17Q9NVC6 651 aa16.88■□□□□ 0.29
PTCD3-204ENST00000418628 CALML5Q9NZT1 146 aa16.88■□□□□ 0.29
PTCD3-204ENST00000418628 SH3BGRL2Q9UJC5 107 aa16.88■□□□□ 0.29
PTCD3-204ENST00000418628 CARD8Q9Y2G2 431 aa16.88■□□□□ 0.29
PTCD3-204ENST00000418628 OR2M5A3KFT3 312 aa16.87■□□□□ 0.29
PTCD3-204ENST00000418628 FIGNL2A6NMB9 653 aa16.87■□□□□ 0.29
PTCD3-204ENST00000418628 HCRTR2O43614 444 aa16.87■□□□□ 0.29
PTCD3-204ENST00000418628 NTN1O95631 604 aa16.87■□□□□ 0.29
PTCD3-204ENST00000418628 NPPAP01160 153 aa16.87■□□□□ 0.29
PTCD3-204ENST00000418628 ACVR2AP27037 513 aa16.87■□□□□ 0.29
PTCD3-204ENST00000418628 RNF144AP50876 292 aaPredicted RBP16.87■□□□□ 0.29
PTCD3-204ENST00000418628 DLX5P56178 289 aa16.87■□□□□ 0.29
PTCD3-204ENST00000418628 PER3P56645 1201 aa16.87■□□□□ 0.29
PTCD3-204ENST00000418628 NFYCQ13952 458 aa16.87■□□□□ 0.29
PTCD3-204ENST00000418628 WLSQ5T9L3 541 aa16.87■□□□□ 0.29
PTCD3-204ENST00000418628 MTFR2Q6P444 385 aa16.87■□□□□ 0.29
PTCD3-204ENST00000418628 CPLX4Q7Z7G2 160 aa16.87■□□□□ 0.29
PTCD3-204ENST00000418628 ADGRE4PQ86SQ3 457 aa16.87■□□□□ 0.29
PTCD3-204ENST00000418628 MTDHQ86UE4 582 aaKnown RBP16.87■□□□□ 0.29
PTCD3-204ENST00000418628 CMIPQ8IY22 773 aa16.87■□□□□ 0.29
PTCD3-204ENST00000418628 ULK2Q8IYT8 1036 aa16.87■□□□□ 0.29
PTCD3-204ENST00000418628 METTL25Q8N6Q8 603 aa16.87■□□□□ 0.29
PTCD3-204ENST00000418628 ZNF614Q8N883 585 aa16.87■□□□□ 0.29
PTCD3-204ENST00000418628 OR5M9Q8NGP3 310 aa16.87■□□□□ 0.29
PTCD3-204ENST00000418628 RP9Q8TA86 221 aaKnown RBP16.87■□□□□ 0.29
PTCD3-204ENST00000418628 POC1BQ8TC44 478 aa16.87■□□□□ 0.29
PTCD3-204ENST00000418628 GPR119Q8TDV5 335 aa16.87■□□□□ 0.29
PTCD3-204ENST00000418628 MAL2Q969L2 176 aa16.87■□□□□ 0.29
PTCD3-204ENST00000418628 ZBTB8AQ96BR9 441 aa16.87■□□□□ 0.29
PTCD3-204ENST00000418628 ZNF524Q96C55 264 aa16.87■□□□□ 0.29
PTCD3-204ENST00000418628 SFXN2Q96NB2 322 aa16.87■□□□□ 0.29
PTCD3-204ENST00000418628 TRIM8Q9BZR9 551 aa16.87■□□□□ 0.29
PTCD3-204ENST00000418628 LAT2Q9GZY6 243 aa16.87■□□□□ 0.29
PTCD3-204ENST00000418628 MTHFD2LQ9H903 347 aaPredicted RBP16.87■□□□□ 0.29
PTCD3-204ENST00000418628 EXOSC3Q9NQT5 275 aaKnown RBP16.87■□□□□ 0.29
PTCD3-204ENST00000418628 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.87■□□□□ 0.29
PTCD3-204ENST00000418628 ACAD8Q9UKU7 415 aa16.87■□□□□ 0.29
PTCD3-204ENST00000418628 SLC35A3Q9Y2D2 325 aa16.87■□□□□ 0.29
PTCD3-204ENST00000418628 LINC01387J3KSC0 135 aa16.86■□□□□ 0.29
PTCD3-204ENST00000418628 MRASO14807 208 aa16.86■□□□□ 0.29
PTCD3-204ENST00000418628 HOXD4P09016 255 aaPredicted RBP16.86■□□□□ 0.29
PTCD3-204ENST00000418628 GABRA1P14867 456 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms