RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 LYPD3O95274 346 aa15.48■□□□□ 0.07
SSBP3-205ENST00000417664 MPLP40238 635 aa15.48■□□□□ 0.07
SSBP3-205ENST00000417664 ACAA2P42765 397 aaKnown RBP15.48■□□□□ 0.07
SSBP3-205ENST00000417664 PCYT1AP49585 367 aa15.48■□□□□ 0.07
SSBP3-205ENST00000417664 LSM11P83369 360 aaKnown RBP eCLIP15.48■□□□□ 0.07
SSBP3-205ENST00000417664 ANGPT1Q15389 498 aa15.48■□□□□ 0.07
SSBP3-205ENST00000417664 TBCEQ15813 527 aaPredicted RBP15.48■□□□□ 0.07
SSBP3-205ENST00000417664 PHF19Q5T6S3 580 aa15.48■□□□□ 0.07
SSBP3-205ENST00000417664 SYT6Q5T7P8 510 aaPredicted RBP15.48■□□□□ 0.07
SSBP3-205ENST00000417664 GPR107Q5VW38 600 aa15.48■□□□□ 0.07
SSBP3-205ENST00000417664 HLA-DQA1Q5Y7H0 255 aa15.48■□□□□ 0.07
SSBP3-205ENST00000417664 SLC29A4Q7RTT9 530 aa15.48■□□□□ 0.07
SSBP3-205ENST00000417664 OVCH1Q7RTY7 1134 aa15.48■□□□□ 0.07
SSBP3-205ENST00000417664 C9orf43Q8TAL5 461 aaPredicted RBP15.48■□□□□ 0.07
SSBP3-205ENST00000417664 RAB2BQ8WUD1 216 aa15.48■□□□□ 0.07
SSBP3-205ENST00000417664 CCNL2Q96S94 520 aaPredicted RBP15.48■□□□□ 0.07
SSBP3-205ENST00000417664 BCL7BQ9BQE9 202 aa15.48■□□□□ 0.07
SSBP3-205ENST00000417664 NXF5Q9H1B4 397 aaKnown RBP15.48■□□□□ 0.07
SSBP3-205ENST00000417664 ACOT13Q9NPJ3 140 aa15.48■□□□□ 0.07
SSBP3-205ENST00000417664 NCOR1O75376 2440 aa15.48■□□□□ 0.07
SSBP3-205ENST00000417664 CSTAP01040 98 aa15.48■□□□□ 0.07
SSBP3-205ENST00000417664 PAX7P23759 505 aa15.48■□□□□ 0.07
SSBP3-205ENST00000417664 ACVR2AP27037 513 aa15.48■□□□□ 0.07
SSBP3-205ENST00000417664 SLC5A2P31639 672 aa15.48■□□□□ 0.07
SSBP3-205ENST00000417664 PRKCDQ05655 676 aa15.48■□□□□ 0.07
SSBP3-205ENST00000417664 ZFP36L1Q07352 338 aaKnown RBP15.48■□□□□ 0.07
SSBP3-205ENST00000417664 EBPQ15125 230 aaKnown RBP15.48■□□□□ 0.07
SSBP3-205ENST00000417664 NNATQ16517 81 aa15.48■□□□□ 0.07
SSBP3-205ENST00000417664 ZNF385CQ66K41 422 aaPredicted RBP15.48■□□□□ 0.07
SSBP3-205ENST00000417664 RPL13AP3Q6NVV1 102 aa15.48■□□□□ 0.07
SSBP3-205ENST00000417664 LAPTM4BQ86VI4 370 aa15.48■□□□□ 0.07
SSBP3-205ENST00000417664 KIF18BQ86Y91 864 aa15.48■□□□□ 0.07
SSBP3-205ENST00000417664 STX19Q8N4C7 294 aa15.48■□□□□ 0.07
SSBP3-205ENST00000417664 POGLUT1Q8NBL1 392 aa15.48■□□□□ 0.07
SSBP3-205ENST00000417664 AGBL5Q8NDL9 886 aa15.48■□□□□ 0.07
SSBP3-205ENST00000417664 OR4C3Q8NH37 302 aa15.48■□□□□ 0.07
SSBP3-205ENST00000417664 HSPBAP1Q96EW2 488 aa15.48■□□□□ 0.07
SSBP3-205ENST00000417664 SLC38A2Q96QD8 506 aa15.48■□□□□ 0.07
SSBP3-205ENST00000417664 NUDT9Q9BW91 350 aa15.48■□□□□ 0.07
SSBP3-205ENST00000417664 CNIH4Q9P003 139 aa15.48■□□□□ 0.07
SSBP3-205ENST00000417664 ZNF223Q9UK11 482 aaPredicted RBP15.48■□□□□ 0.07
SSBP3-205ENST00000417664 MED31Q9Y3C7 131 aa15.48■□□□□ 0.07
SSBP3-205ENST00000417664 RPL36Q9Y3U8 105 aaKnown RBP15.48■□□□□ 0.07
SSBP3-205ENST00000417664 TRIM64BA6NI03 449 aa15.47■□□□□ 0.07
SSBP3-205ENST00000417664 SNTNA6NMZ2 147 aa15.47■□□□□ 0.07
SSBP3-205ENST00000417664 AHCYL1O43865 530 aa15.47■□□□□ 0.07
SSBP3-205ENST00000417664 BCAS1O75363 584 aaPredicted RBP15.47■□□□□ 0.07
SSBP3-205ENST00000417664 IGFBP1P08833 259 aaPredicted RBP15.47■□□□□ 0.07
SSBP3-205ENST00000417664 HPGDP15428 266 aa15.47■□□□□ 0.07
SSBP3-205ENST00000417664 ENDOUP21128 410 aaKnown RBP15.47■□□□□ 0.07
SSBP3-205ENST00000417664 ACP1P24666 158 aa15.47■□□□□ 0.07
SSBP3-205ENST00000417664 AVPR2P30518 371 aa15.47■□□□□ 0.07
SSBP3-205ENST00000417664 SLC15A1P46059 708 aa15.47■□□□□ 0.07
SSBP3-205ENST00000417664 ST13P50502 369 aaKnown RBP15.47■□□□□ 0.07
SSBP3-205ENST00000417664 EFNA3P52797 238 aa15.47■□□□□ 0.07
SSBP3-205ENST00000417664 CTBP2P56545 445 aa15.47■□□□□ 0.07
SSBP3-205ENST00000417664 EFNB1P98172 346 aa15.47■□□□□ 0.07
SSBP3-205ENST00000417664 LSAMPQ13449 338 aa15.47■□□□□ 0.07
SSBP3-205ENST00000417664 UBE2UQ5VVX9 321 aa15.47■□□□□ 0.07
SSBP3-205ENST00000417664 ULK3Q6PHR2 472 aa15.47■□□□□ 0.07
SSBP3-205ENST00000417664 ZNF620Q6ZNG0 422 aa15.47■□□□□ 0.07
SSBP3-205ENST00000417664 TMPRSS11FQ6ZWK6 438 aa15.47■□□□□ 0.07
SSBP3-205ENST00000417664 ZNF321PQ8N8H1 164 aa15.47■□□□□ 0.07
SSBP3-205ENST00000417664 SLC38A9Q8NBW4 561 aa15.47■□□□□ 0.07
SSBP3-205ENST00000417664 FAM71CQ8NEG0 241 aa15.47■□□□□ 0.07
SSBP3-205ENST00000417664 DNAJA4Q8WW22 397 aaPredicted RBP15.47■□□□□ 0.07
SSBP3-205ENST00000417664 C12orf43Q96C57 262 aaKnown RBP15.47■□□□□ 0.07
SSBP3-205ENST00000417664 ZNF426Q9BUY5 554 aa15.47■□□□□ 0.07
SSBP3-205ENST00000417664 SLC26A1Q9H2B4 701 aa15.47■□□□□ 0.07
SSBP3-205ENST00000417664 EXOSC3Q9NQT5 275 aaKnown RBP15.47■□□□□ 0.07
SSBP3-205ENST00000417664 MED17Q9NVC6 651 aa15.47■□□□□ 0.07
SSBP3-205ENST00000417664 TVP23BQ9NYZ1 205 aa15.47■□□□□ 0.07
SSBP3-205ENST00000417664 SELENONQ9NZV5 590 aa15.47■□□□□ 0.07
SSBP3-205ENST00000417664 CDH10Q9Y6N8 788 aa15.47■□□□□ 0.07
SSBP3-205ENST00000417664 FER1L5A0AVI2 2057 aa15.46■□□□□ 0.07
SSBP3-205ENST00000417664 A0A1B0GWA3 101 aa15.46■□□□□ 0.07
SSBP3-205ENST00000417664 HTR3EA5X5Y0 456 aa15.46■□□□□ 0.07
SSBP3-205ENST00000417664 VSTM2BA6NLU5 285 aa15.46■□□□□ 0.07
SSBP3-205ENST00000417664 SCDO00767 359 aa15.46■□□□□ 0.07
SSBP3-205ENST00000417664 LDOC1O95751 146 aaPredicted RBP15.46■□□□□ 0.07
SSBP3-205ENST00000417664 HEXBP07686 556 aa15.46■□□□□ 0.07
SSBP3-205ENST00000417664 ATXN8OSP0DMR3 200 aa15.46■□□□□ 0.07
SSBP3-205ENST00000417664 TBXA2RP21731 343 aa15.46■□□□□ 0.07
SSBP3-205ENST00000417664 MASP1P48740 699 aa15.46■□□□□ 0.07
SSBP3-205ENST00000417664 ST3GAL4Q11206 333 aa15.46■□□□□ 0.07
SSBP3-205ENST00000417664 TMEM44Q2T9K0 475 aa15.46■□□□□ 0.07
SSBP3-205ENST00000417664 PRSS58Q8IYP2 241 aa15.46■□□□□ 0.07
SSBP3-205ENST00000417664 SLC43A2Q8N370 569 aa15.46■□□□□ 0.07
SSBP3-205ENST00000417664 GALNT15Q8N3T1 639 aa15.46■□□□□ 0.07
SSBP3-205ENST00000417664 TCEANCQ8N8B7 351 aa15.46■□□□□ 0.07
SSBP3-205ENST00000417664 B3GNT7Q8NFL0 401 aa15.46■□□□□ 0.07
SSBP3-205ENST00000417664 METTL21AQ8WXB1 218 aa15.46■□□□□ 0.07
SSBP3-205ENST00000417664 CRELD1Q96HD1 420 aa15.46■□□□□ 0.07
SSBP3-205ENST00000417664 IL4I1Q96RQ9 567 aa15.46■□□□□ 0.07
SSBP3-205ENST00000417664 RHNO1Q9BSD3 238 aa15.46■□□□□ 0.07
SSBP3-205ENST00000417664 CDCA4Q9BXL8 241 aa15.46■□□□□ 0.07
SSBP3-205ENST00000417664 WWTR1Q9GZV5 400 aa15.46■□□□□ 0.07
SSBP3-205ENST00000417664 RPS6KB2Q9UBS0 482 aa15.46■□□□□ 0.07
SSBP3-205ENST00000417664 WARS2Q9UGM6 360 aaKnown RBP15.46■□□□□ 0.07
SSBP3-205ENST00000417664 ASCC3Q8N3C0 2202 aaKnown RBP15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms