RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 PRKCDQ05655 676 aa5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 AIMP2Q13155 320 aaKnown RBP5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 HNF4GQ14541 408 aa5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 SURF1Q15526 300 aa5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 SSX2Q16385 188 aa5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 HIST2H2ACQ16777 129 aaPredicted RBP5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 HADHQ16836 314 aaKnown RBP5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 DGUOKQ16854 277 aa5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 EXOC3L4Q17RC7 722 aa5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 AP5B1Q2VPB7 878 aa5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 FAM174BQ3ZCQ3 159 aa5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 PARP15Q460N3 678 aa5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 RNF212Q495C1 297 aa5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 LDLRAP1Q5SW96 308 aa5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 DDI2Q5TDH0 399 aa5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 KRT39Q6A163 491 aa5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 KIAA0930Q6ICG6 404 aaPredicted RBP5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 ZNF773Q6PK81 442 aa5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 FAM198BQ6UWH4 519 aa5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 C3P1Q6ZMU1 363 aa5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 C1orf122Q6ZSJ8 110 aa5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 PAQR7Q86WK9 346 aa5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 KRT73Q86Y46 540 aa5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 LRRC57Q8N9N7 239 aa5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 ATG16L2Q8NAA4 619 aa5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 OR6Q1Q8NGQ2 317 aa5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 RHOXF1Q8NHV9 184 aa5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 HUS1BQ8NHY5 278 aa5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 RP9Q8TA86 221 aaKnown RBP5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 SLC37A2Q8TED4 501 aa5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 SLC7A6Q92536 515 aa5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 TMIGD2Q96BF3 282 aa5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 FAM71F1Q96KD3 344 aaPredicted RBP5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 C10orf90Q96M02 699 aa5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 RILPQ96NA2 401 aa5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 ZNF285Q96NJ3 590 aa5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 PKP4Q99569 1192 aa5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 C2orf88Q9BSF0 95 aa5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 WRAP53Q9BUR4 548 aaKnown RBP5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 MND1Q9BWT6 205 aa5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 TMEM120AQ9BXJ8 343 aa5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 SIK2Q9H0K1 926 aa5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 METTL9Q9H1A3 318 aa5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 MAGEH1Q9H213 219 aa5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 SPNS1Q9H2V7 528 aa5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 RANBP3Q9H6Z4 567 aaPredicted RBP5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 CATSPERBQ9H7T0 1116 aa5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 NANSQ9NR45 359 aa5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 YAE1D1Q9NRH1 226 aa5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 SNX15Q9NRS6 342 aa5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 IMP3Q9NV31 184 aaKnown RBP5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 MCUBQ9NWR8 336 aa5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 THUMPD1Q9NXG2 353 aaKnown RBP5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 P4HTMQ9NXG6 502 aa5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 BABAM2Q9NXR7 383 aa5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 TREM2Q9NZC2 230 aa5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 TMEM216Q9P0N5 145 aa5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 HEY2Q9UBP5 337 aa5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 PADI2Q9Y2J8 665 aa5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 TCAF1Q9Y4C2 921 aa5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 RYR3Q15413 4870 aa5.07□□□□□ -1.6
ECHDC1-206ENST00000417628 SVEP1Q4LDE5 3571 aa5.06□□□□□ -1.6
ECHDC1-206ENST00000417628 TRIM49BA6NDI0 452 aa5.06□□□□□ -1.6
ECHDC1-206ENST00000417628 AQP12BA6NM10 295 aa5.06□□□□□ -1.6
ECHDC1-206ENST00000417628 K7ERQ8 282 aa5.06□□□□□ -1.6
ECHDC1-206ENST00000417628 RAB27BO00194 218 aa5.06□□□□□ -1.6
ECHDC1-206ENST00000417628 COPEO14579 308 aa5.06□□□□□ -1.6
ECHDC1-206ENST00000417628 GPR171O14626 319 aa5.06□□□□□ -1.6
ECHDC1-206ENST00000417628 ADAM10O14672 748 aa5.06□□□□□ -1.6
ECHDC1-206ENST00000417628 ITGB1BP1O14713 200 aa5.06□□□□□ -1.6
ECHDC1-206ENST00000417628 TGFB1I1O43294 461 aa5.06□□□□□ -1.6
ECHDC1-206ENST00000417628 FOXS1O43638 330 aa5.06□□□□□ -1.6
ECHDC1-206ENST00000417628 TYROBPO43914 113 aa5.06□□□□□ -1.6
ECHDC1-206ENST00000417628 MRPS14O60783 128 aaKnown RBP5.06□□□□□ -1.6
ECHDC1-206ENST00000417628 STX11O75558 287 aa5.06□□□□□ -1.6
ECHDC1-206ENST00000417628 SCRG1O75711 98 aa5.06□□□□□ -1.6
ECHDC1-206ENST00000417628 GCNT3O95395 438 aa5.06□□□□□ -1.6
ECHDC1-206ENST00000417628 SERPING1P05155 500 aa5.06□□□□□ -1.6
ECHDC1-206ENST00000417628 LINC00614P0C842 121 aa5.06□□□□□ -1.6
ECHDC1-206ENST00000417628 DHRS4L1P0CG22 281 aa5.06□□□□□ -1.6
ECHDC1-206ENST00000417628 CYP2A6P11509 494 aaPredicted RBP5.06□□□□□ -1.6
ECHDC1-206ENST00000417628 ABOP16442 354 aa5.06□□□□□ -1.6
ECHDC1-206ENST00000417628 ZNF26P17031 533 aaPredicted RBP5.06□□□□□ -1.6
ECHDC1-206ENST00000417628 MGAT1P26572 445 aa5.06□□□□□ -1.6
ECHDC1-206ENST00000417628 ACVR2AP27037 513 aa5.06□□□□□ -1.6
ECHDC1-206ENST00000417628 CXCR5P32302 372 aa5.06□□□□□ -1.6
ECHDC1-206ENST00000417628 CEACAM6P40199 344 aa5.06□□□□□ -1.6
ECHDC1-206ENST00000417628 SLC26A5P58743 744 aa5.06□□□□□ -1.6
ECHDC1-206ENST00000417628 CD81P60033 236 aa5.06□□□□□ -1.6
ECHDC1-206ENST00000417628 ARG2P78540 354 aa5.06□□□□□ -1.6
ECHDC1-206ENST00000417628 IFITM3Q01628 133 aa5.06□□□□□ -1.6
ECHDC1-206ENST00000417628 FGL1Q08830 312 aa5.06□□□□□ -1.6
ECHDC1-206ENST00000417628 NFATC2Q13469 925 aa5.06□□□□□ -1.6
ECHDC1-206ENST00000417628 GPR50Q13585 617 aa5.06□□□□□ -1.6
ECHDC1-206ENST00000417628 FLOT2Q14254 428 aa5.06□□□□□ -1.6
ECHDC1-206ENST00000417628 SMCO1Q147U7 214 aa5.06□□□□□ -1.6
ECHDC1-206ENST00000417628 TRAM2Q15035 370 aa5.06□□□□□ -1.6
ECHDC1-206ENST00000417628 ETFDHQ16134 617 aa5.06□□□□□ -1.6
ECHDC1-206ENST00000417628 SLC18A3Q16572 532 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms