RNA–Protein interactions for RNA: ENST00000417101.1

ACTB-203, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 472 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-203ENST00000417101 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP19.48■□□□□ 0.71
ACTB-203ENST00000417101 SPAG7O75391 227 aa19.48■□□□□ 0.71
ACTB-203ENST00000417101 LINGO3P0C6S8 592 aa19.48■□□□□ 0.71
ACTB-203ENST00000417101 PPP3CBP16298 524 aa19.48■□□□□ 0.71
ACTB-203ENST00000417101 ATP6V1C1P21283 382 aa19.48■□□□□ 0.71
ACTB-203ENST00000417101 SFTPDP35247 375 aa19.48■□□□□ 0.71
ACTB-203ENST00000417101 RPL3P39023 403 aaKnown RBP19.48■□□□□ 0.71
ACTB-203ENST00000417101 CARD18P57730 90 aa19.48■□□□□ 0.71
ACTB-203ENST00000417101 ZNF117Q03924 483 aa19.48■□□□□ 0.71
ACTB-203ENST00000417101 TP53BP2Q13625 1128 aa19.48■□□□□ 0.71
ACTB-203ENST00000417101 PTGR1Q14914 329 aa19.48■□□□□ 0.71
ACTB-203ENST00000417101 XKR7Q5GH72 579 aa19.48■□□□□ 0.71
ACTB-203ENST00000417101 BEX5Q5H9J7 111 aa19.48■□□□□ 0.71
ACTB-203ENST00000417101 PDSS1Q5T2R2 415 aa19.48■□□□□ 0.71
ACTB-203ENST00000417101 TRABD2AQ86V40 505 aa19.48■□□□□ 0.71
ACTB-203ENST00000417101 NUDT8Q8WV74 236 aa19.48■□□□□ 0.71
ACTB-203ENST00000417101 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.48■□□□□ 0.713e-10■■■■□ 22.1
ACTB-203ENST00000417101 OR5P2Q8WZ92 322 aa19.48■□□□□ 0.71
ACTB-203ENST00000417101 KLHL15Q96M94 604 aa19.48■□□□□ 0.71
ACTB-203ENST00000417101 Q96MF0 132 aa19.48■□□□□ 0.71
ACTB-203ENST00000417101 C1orf50Q9BV19 199 aa19.48■□□□□ 0.71
ACTB-203ENST00000417101 C12orf49Q9H741 205 aa19.48■□□□□ 0.71
ACTB-203ENST00000417101 NPIPA5A0A0B4J1W7 369 aa19.47■□□□□ 0.71
ACTB-203ENST00000417101 NPIPA7E9PJI5 369 aa19.47■□□□□ 0.71
ACTB-203ENST00000417101 KLF4O43474 513 aa19.47■□□□□ 0.71
ACTB-203ENST00000417101 OIP5O43482 229 aa19.47■□□□□ 0.71
ACTB-203ENST00000417101 SLU7O95391 586 aaKnown RBP19.47■□□□□ 0.71
ACTB-203ENST00000417101 NPIPA8P0DM63 369 aa19.47■□□□□ 0.71
ACTB-203ENST00000417101 SHC1P29353 583 aa19.47■□□□□ 0.71
ACTB-203ENST00000417101 EIF1P41567 113 aaKnown RBP19.47■□□□□ 0.71
ACTB-203ENST00000417101 CCT3P49368 545 aaKnown RBP19.47■□□□□ 0.71
ACTB-203ENST00000417101 FOXF1Q12946 379 aa19.47■□□□□ 0.71
ACTB-203ENST00000417101 SPDYE7PQ495Y7 208 aa19.47■□□□□ 0.71
ACTB-203ENST00000417101 ATP6AP1LQ52LC2 224 aa19.47■□□□□ 0.71
ACTB-203ENST00000417101 CDC73Q6P1J9 531 aa19.47■□□□□ 0.71
ACTB-203ENST00000417101 BEND4Q6ZU67 534 aa19.47■□□□□ 0.71
ACTB-203ENST00000417101 YTHDF3Q7Z739 585 aaKnown RBP19.47■□□□□ 0.71
ACTB-203ENST00000417101 STK32CQ86UX6 486 aa19.47■□□□□ 0.71
ACTB-203ENST00000417101 CIARTQ8N365 385 aaPredicted RBP19.47■□□□□ 0.71
ACTB-203ENST00000417101 ADAMTS15Q8TE58 950 aa19.47■□□□□ 0.71
ACTB-203ENST00000417101 ROBO4Q8WZ75 1007 aa19.47■□□□□ 0.71
ACTB-203ENST00000417101 C3orf30Q96M34 536 aa19.47■□□□□ 0.71
ACTB-203ENST00000417101 ACTRT3Q9BYD9 372 aa19.47■□□□□ 0.71
ACTB-203ENST00000417101 CXorf36Q9H7Y0 433 aa19.47■□□□□ 0.71
ACTB-203ENST00000417101 FANCFQ9NPI8 374 aa19.47■□□□□ 0.71
ACTB-203ENST00000417101 FAF1Q9UNN5 650 aaPredicted RBP19.47■□□□□ 0.71
ACTB-203ENST00000417101 DSCAMO60469 2012 aa19.46■□□□□ 0.71
ACTB-203ENST00000417101 H7C1Q1 480 aa19.46■□□□□ 0.71
ACTB-203ENST00000417101 NUDT14O95848 222 aa19.46■□□□□ 0.71
ACTB-203ENST00000417101 C6orf47O95873 294 aa19.46■□□□□ 0.71
ACTB-203ENST00000417101 TUBBP07437 444 aa19.46■□□□□ 0.71
ACTB-203ENST00000417101 AGTR1P30556 359 aa19.46■□□□□ 0.71
ACTB-203ENST00000417101 ARRB2P32121 409 aa19.46■□□□□ 0.71
ACTB-203ENST00000417101 KLHL26Q53HC5 615 aa19.46■□□□□ 0.71
ACTB-203ENST00000417101 C6orf136Q5SQH8 315 aa19.46■□□□□ 0.71
ACTB-203ENST00000417101 GTF2IRD2BQ6EKJ0 949 aa19.46■□□□□ 0.71
ACTB-203ENST00000417101 CBLN3Q6UW01 205 aa19.46■□□□□ 0.71
ACTB-203ENST00000417101 PRSS57Q6UWY2 283 aa19.46■□□□□ 0.71
ACTB-203ENST00000417101 MTERF4Q7Z6M4 381 aaKnown RBP19.46■□□□□ 0.71
ACTB-203ENST00000417101 GTF2IRD2Q86UP8 949 aa19.46■□□□□ 0.71
ACTB-203ENST00000417101 RIBC1Q8N443 379 aaPredicted RBP19.46■□□□□ 0.71
ACTB-203ENST00000417101 KRTCAP2Q8N6L1 136 aa19.46■□□□□ 0.71
ACTB-203ENST00000417101 ZNF527Q8NB42 609 aa19.46■□□□□ 0.71
ACTB-203ENST00000417101 OR56A1Q8NGH5 318 aa19.46■□□□□ 0.71
ACTB-203ENST00000417101 PSMA8Q8TAA3 256 aa19.46■□□□□ 0.71
ACTB-203ENST00000417101 PPP1R14CQ8TAE6 165 aa19.46■□□□□ 0.71
ACTB-203ENST00000417101 TCP10LQ8TDR4 215 aa19.46■□□□□ 0.71
ACTB-203ENST00000417101 COX4I2Q96KJ9 171 aa19.46■□□□□ 0.71
ACTB-203ENST00000417101 ACTR6Q9GZN1 396 aa19.46■□□□□ 0.71
ACTB-203ENST00000417101 ATAD3AQ9NVI7 634 aa19.46■□□□□ 0.71
ACTB-203ENST00000417101 CARD8Q9Y2G2 431 aa19.46■□□□□ 0.71
ACTB-203ENST00000417101 KCNE3Q9Y6H6 103 aa19.46■□□□□ 0.71
ACTB-203ENST00000417101 ZANQ9Y493 2812 aa19.45■□□□□ 0.7
ACTB-203ENST00000417101 SKAP2O75563 359 aaPredicted RBP19.45■□□□□ 0.7
ACTB-203ENST00000417101 LYPLA1O75608 230 aaPredicted RBP19.45■□□□□ 0.7
ACTB-203ENST00000417101 ELK4P28324 431 aa19.45■□□□□ 0.7
ACTB-203ENST00000417101 ZNF239Q16600 458 aaKnown RBP19.45■□□□□ 0.7
ACTB-203ENST00000417101 DCST2Q5T1A1 773 aa19.45■□□□□ 0.7
ACTB-203ENST00000417101 DDX59Q5T1V6 619 aaKnown RBP eCLIP19.45■□□□□ 0.7
ACTB-203ENST00000417101 IL23RQ5VWK5 629 aa19.45■□□□□ 0.7
ACTB-203ENST00000417101 ZNF704Q6ZNC4 412 aaPredicted RBP19.45■□□□□ 0.7
ACTB-203ENST00000417101 PLEKHM3Q6ZWE6 761 aa19.45■□□□□ 0.7
ACTB-203ENST00000417101 WFDC8Q8IUA0 241 aa19.45■□□□□ 0.7
ACTB-203ENST00000417101 FNDC5Q8NAU1 212 aa19.45■□□□□ 0.7
ACTB-203ENST00000417101 FBXO27Q8NI29 283 aa19.45■□□□□ 0.7
ACTB-203ENST00000417101 REXO5Q96IC2 774 aaKnown RBP19.45■□□□□ 0.7
ACTB-203ENST00000417101 HOXD1Q9GZZ0 328 aa19.45■□□□□ 0.7
ACTB-203ENST00000417101 GPATCH2Q9NW75 528 aa19.45■□□□□ 0.7
ACTB-203ENST00000417101 TLN2Q9Y4G6 2542 aa19.45■□□□□ 0.7
ACTB-203ENST00000417101 FAM171A2A8MVW0 826 aa19.44■□□□□ 0.7
ACTB-203ENST00000417101 H3BNH8 94 aa19.44■□□□□ 0.7
ACTB-203ENST00000417101 GTPBP1O00178 669 aaKnown RBP19.44■□□□□ 0.7
ACTB-203ENST00000417101 ZNF195O14628 629 aa19.44■□□□□ 0.7
ACTB-203ENST00000417101 EFNA2O43921 213 aa19.44■□□□□ 0.7
ACTB-203ENST00000417101 LY6G6DO95868 133 aa19.44■□□□□ 0.7
ACTB-203ENST00000417101 HEXAP06865 529 aa19.44■□□□□ 0.7
ACTB-203ENST00000417101 KRT16P08779 473 aa19.44■□□□□ 0.7
ACTB-203ENST00000417101 NUDT17P0C025 328 aa19.44■□□□□ 0.7
ACTB-203ENST00000417101 PABPC4LP0CB38 370 aaKnown RBP19.44■□□□□ 0.7
ACTB-203ENST00000417101 P2RX1P51575 399 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms