RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 CLDN22Q8N7P3 220 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 NANOGP1Q8N7R0 232 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 DNAJC5GQ8N7S2 189 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 OR2M7Q8NG81 312 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 OR10W1Q8NGF6 305 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 LNX1Q8TBB1 728 aaPredicted RBP3.35□□□□□ -1.87
SF3B1-203ENST00000414174 ZNF398Q8TD17 642 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 PPP4R1Q8TF05 950 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 WIPF2Q8TF74 440 aaPredicted RBP3.35□□□□□ -1.87
SF3B1-203ENST00000414174 APH1BQ8WW43 257 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 TM9SF4Q92544 642 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 NAT6Q93015 286 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 LHX4Q969G2 390 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 SMIM12Q96EX1 92 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 C14orf144Q96I85 54 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 IGSF21Q96ID5 467 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 RPL10LQ96L21 214 aaKnown RBP3.35□□□□□ -1.87
SF3B1-203ENST00000414174 PPP3R2Q96LZ3 170 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 ZNF641Q96N77 438 aaPredicted RBP3.35□□□□□ -1.87
SF3B1-203ENST00000414174 GNRHR2Q96P88 292 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 TNFRSF13CQ96RJ3 184 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 RBBP8Q99708 897 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 AIF1LQ9BQI0 150 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 SYT11Q9BT88 431 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 DCUN1D5Q9BTE7 237 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 WRAP53Q9BUR4 548 aaKnown RBP3.35□□□□□ -1.87
SF3B1-203ENST00000414174 PTDSS2Q9BVG9 487 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 GGACTQ9BVM4 153 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 RBM24Q9BX46 236 aaKnown RBP3.35□□□□□ -1.87
SF3B1-203ENST00000414174 SLC46A2Q9BY10 475 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 LRRC2Q9BYS8 371 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 ELOVL4Q9GZR5 314 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 ACTL8Q9H568 366 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 EPHX3Q9H6B9 360 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 EGLN3Q9H6Z9 239 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 NT5DC2Q9H857 520 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 Q9N2J8 555 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 BIN3Q9NQY0 253 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 ENTPD7Q9NQZ7 604 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 THSD1Q9NS62 852 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 CYSLTR2Q9NS75 346 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 SEMA4GQ9NTN9 838 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 PLEKHJ1Q9NW61 149 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 IMPAD1Q9NX62 359 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 PTTG3PQ9NZH4 202 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 SLC17A6Q9P2U8 582 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 XPR1Q9UBH6 696 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 ZNF282Q9UDV7 671 aaPredicted RBP3.35□□□□□ -1.87
SF3B1-203ENST00000414174 MIOXQ9UGB7 285 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 ZNF225Q9UK10 706 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 PITPNC1Q9UKF7 332 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 EMCNQ9ULC0 261 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 ZDHHC8Q9ULC8 765 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 ZNF490Q9ULM2 529 aaPredicted RBP3.35□□□□□ -1.87
SF3B1-203ENST00000414174 FZD4Q9ULV1 537 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 KCNJ14Q9UNX9 436 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 B9D1Q9UPM9 204 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 B3GNT3Q9Y2A9 372 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 CSDC2Q9Y534 153 aaKnown RBP3.35□□□□□ -1.87
SF3B1-203ENST00000414174 ACTL7AQ9Y615 435 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 EMSYQ7Z589 1322 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 MSH6P52701 1360 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 CCDC7Q96M83 1385 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 DISP3Q9P2K9 1392 aa3.35□□□□□ -1.87
SF3B1-203ENST00000414174 MAGI1Q96QZ7 1491 aaPredicted RBP3.35□□□□□ -1.87
SF3B1-203ENST00000414174 ABCA10Q8WWZ4 1543 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 PPIAL4EA0A075B759 164 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 LOC102723971A0A1B0GUV8 181 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 PRAMEF22A3QJZ6 481 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 VSTM2BA6NLU5 285 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 A8MU76 341 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 HHLA1C9JL84 531 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 G3V3Y1 287 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 H3BNH8 94 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 CLDN34H7C241 214 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 M0QXV9 152 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 F2RL2O00254 374 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 EEF2KO00418 725 aaKnown RBP3.34□□□□□ -1.87
SF3B1-203ENST00000414174 BHLHE40O14503 412 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 ADAM10O14672 748 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 SIVA1O15304 175 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 INPP4BO15327 924 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 SLC16A4O15374 487 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 ZNF749O43361 778 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 LATO43561 262 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 PSTPIP1O43586 416 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 FOXS1O43638 330 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 PLIN3O60664 434 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 LRP3O75074 770 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 CYP7B1O75881 506 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 TM7SF2O76062 418 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 AQP8O94778 261 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 GLSO94925 669 aaPredicted RBP3.34□□□□□ -1.87
SF3B1-203ENST00000414174 ZWINTO95229 277 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 CBX6O95503 412 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 CCNE2O96020 404 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 GCP02774 474 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 CA3P07451 260 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 PPIAL4FP0DN26 164 aa3.34□□□□□ -1.87
SF3B1-203ENST00000414174 HAPLN1P10915 354 aaPredicted RBP3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms