RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 NPIPA5A0A0B4J1W7 369 aa16.19■□□□□ 0.18
PHRF1-202ENST00000413872 NPIPA7E9PJI5 369 aa16.19■□□□□ 0.18
PHRF1-202ENST00000413872 S100A6P06703 90 aa16.19■□□□□ 0.18
PHRF1-202ENST00000413872 NPIPA8P0DM63 369 aa16.19■□□□□ 0.18
PHRF1-202ENST00000413872 TMEM225BP0DP42 221 aa16.19■□□□□ 0.18
PHRF1-202ENST00000413872 SSR4P51571 173 aa16.19■□□□□ 0.18
PHRF1-202ENST00000413872 HSD17B7P56937 341 aa16.19■□□□□ 0.18
PHRF1-202ENST00000413872 IQCF1Q8N6M8 205 aa16.19■□□□□ 0.18
PHRF1-202ENST00000413872 ZNF417Q8TAU3 575 aa16.19■□□□□ 0.18
PHRF1-202ENST00000413872 CASTOR1Q8WTX7 329 aa16.19■□□□□ 0.18
PHRF1-202ENST00000413872 NECAB3Q96P71 396 aaPredicted RBP16.19■□□□□ 0.18
PHRF1-202ENST00000413872 ANKRD60Q9BZ19 345 aa16.19■□□□□ 0.18
PHRF1-202ENST00000413872 INPP5EQ9NRR6 644 aa16.19■□□□□ 0.18
PHRF1-202ENST00000413872 HIF3AQ9Y2N7 669 aa16.19■□□□□ 0.18
PHRF1-202ENST00000413872 MITFO75030 526 aaPredicted RBP16.19■□□□□ 0.18
PHRF1-202ENST00000413872 IGLV3-25P01717 112 aa16.19■□□□□ 0.18
PHRF1-202ENST00000413872 EEF1A1P68104 462 aaKnown RBP16.19■□□□□ 0.18
PHRF1-202ENST00000413872 AIFM2Q9BRQ8 373 aa16.19■□□□□ 0.18
PHRF1-202ENST00000413872 ALG8Q9BVK2 526 aa16.19■□□□□ 0.18
PHRF1-202ENST00000413872 A0A1W2PPK0 400 aa16.18■□□□□ 0.18
PHRF1-202ENST00000413872 OR6C70A6NIJ9 312 aa16.18■□□□□ 0.18
PHRF1-202ENST00000413872 OR7A17O14581 309 aa16.18■□□□□ 0.18
PHRF1-202ENST00000413872 ZNF791Q3KP31 576 aaPredicted RBP16.18■□□□□ 0.18
PHRF1-202ENST00000413872 TMEM31Q5JXX7 168 aa16.18■□□□□ 0.18
PHRF1-202ENST00000413872 SLC6A19Q695T7 634 aa16.18■□□□□ 0.18
PHRF1-202ENST00000413872 PCDH17O14917 1159 aa16.18■□□□□ 0.18
PHRF1-202ENST00000413872 FRS3O43559 492 aa16.18■□□□□ 0.18
PHRF1-202ENST00000413872 RAB40BQ12829 278 aa16.18■□□□□ 0.18
PHRF1-202ENST00000413872 FOXRED2Q8IWF2 684 aa16.18■□□□□ 0.18
PHRF1-202ENST00000413872 HCAR1Q9BXC0 346 aa16.18■□□□□ 0.18
PHRF1-202ENST00000413872 PARPBPQ9NWS1 579 aa16.18■□□□□ 0.18
PHRF1-202ENST00000413872 ABCG2Q9UNQ0 655 aa16.18■□□□□ 0.18
PHRF1-202ENST00000413872 H7C417 338 aa16.18■□□□□ 0.18
PHRF1-202ENST00000413872 M0R129 80 aa16.18■□□□□ 0.18
PHRF1-202ENST00000413872 PTHP01270 115 aa16.18■□□□□ 0.18
PHRF1-202ENST00000413872 IGHG1P01857 330 aa16.18■□□□□ 0.18
PHRF1-202ENST00000413872 SLC35E2P0CK97 266 aa16.18■□□□□ 0.18
PHRF1-202ENST00000413872 ZNF181Q2M3W8 571 aa16.18■□□□□ 0.18
PHRF1-202ENST00000413872 ZNF709Q8N972 641 aa16.18■□□□□ 0.18
PHRF1-202ENST00000413872 OR7G1Q8NGA0 311 aa16.18■□□□□ 0.18
PHRF1-202ENST00000413872 FNDC8Q8TC99 324 aa16.18■□□□□ 0.18
PHRF1-202ENST00000413872 OR10A5Q9H207 317 aa16.18■□□□□ 0.18
PHRF1-202ENST00000413872 OR10A2Q9H208 303 aa16.18■□□□□ 0.18
PHRF1-202ENST00000413872 USP36Q9P275 1121 aaKnown RBP16.18■□□□□ 0.18
PHRF1-202ENST00000413872 ZNF850A8MQ14 1090 aa16.18■□□□□ 0.18
PHRF1-202ENST00000413872 J3QRK9 145 aa16.18■□□□□ 0.18
PHRF1-202ENST00000413872 CD79AP11912 226 aa16.18■□□□□ 0.18
PHRF1-202ENST00000413872 TNFSF4P23510 183 aa16.18■□□□□ 0.18
PHRF1-202ENST00000413872 OR1Q1Q15612 314 aa16.18■□□□□ 0.18
PHRF1-202ENST00000413872 ENTPD8Q5MY95 495 aa16.18■□□□□ 0.18
PHRF1-202ENST00000413872 TMEM244Q5VVB8 128 aa16.18■□□□□ 0.18
PHRF1-202ENST00000413872 IL20RBQ6UXL0 311 aa16.18■□□□□ 0.18
PHRF1-202ENST00000413872 OR5L1Q8NGL2 311 aa16.18■□□□□ 0.18
PHRF1-202ENST00000413872 CITED4Q96RK1 184 aa16.18■□□□□ 0.18
PHRF1-202ENST00000413872 COPZ2Q9P299 210 aa16.18■□□□□ 0.18
PHRF1-202ENST00000413872 FAM155AB1AL88 458 aaPredicted RBP16.17■□□□□ 0.18
PHRF1-202ENST00000413872 TARM1B6A8C7 271 aa16.17■□□□□ 0.18
PHRF1-202ENST00000413872 CTNSO60931 367 aa16.17■□□□□ 0.18
PHRF1-202ENST00000413872 MAS1P04201 325 aa16.17■□□□□ 0.18
PHRF1-202ENST00000413872 IST1P53990 364 aa16.17■□□□□ 0.18
PHRF1-202ENST00000413872 PIGFQ07326 219 aa16.17■□□□□ 0.18
PHRF1-202ENST00000413872 SLC2A12Q8TD20 617 aa16.17■□□□□ 0.18
PHRF1-202ENST00000413872 FRS2Q8WU20 508 aa16.17■□□□□ 0.18
PHRF1-202ENST00000413872 LINC01599Q8WXQ3 324 aa16.17■□□□□ 0.18
PHRF1-202ENST00000413872 BIRC8Q96P09 236 aa16.17■□□□□ 0.18
PHRF1-202ENST00000413872 PLEK2Q9NYT0 353 aa16.17■□□□□ 0.18
PHRF1-202ENST00000413872 CXorf51AA0A1B0GTR3 108 aa16.17■□□□□ 0.18
PHRF1-202ENST00000413872 PLATP00750 562 aa16.17■□□□□ 0.18
PHRF1-202ENST00000413872 ZP2Q05996 745 aa16.17■□□□□ 0.18
PHRF1-202ENST00000413872 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.17■□□□□ 0.18
PHRF1-202ENST00000413872 Q8N402 240 aa16.17■□□□□ 0.18
PHRF1-202ENST00000413872 WDR83Q9BRX9 315 aaKnown RBP16.17■□□□□ 0.18
PHRF1-202ENST00000413872 ZNF175Q9Y473 711 aa16.17■□□□□ 0.18
PHRF1-202ENST00000413872 SLC22A7Q9Y694 548 aa16.17■□□□□ 0.18
PHRF1-202ENST00000413872 TCN2P20062 427 aa16.17■□□□□ 0.18
PHRF1-202ENST00000413872 CDNFQ49AH0 187 aa16.17■□□□□ 0.18
PHRF1-202ENST00000413872 RNASE10Q5GAN6 216 aaKnown RBP16.17■□□□□ 0.18
PHRF1-202ENST00000413872 PAPD5Q8NDF8 572 aaKnown RBP16.17■□□□□ 0.18
PHRF1-202ENST00000413872 CCDC120Q96HB5 630 aa16.17■□□□□ 0.18
PHRF1-202ENST00000413872 OR52D1Q9H346 318 aa16.17■□□□□ 0.18
PHRF1-202ENST00000413872 SLAMF7Q9NQ25 335 aa16.17■□□□□ 0.18
PHRF1-202ENST00000413872 PRDM9Q9NQV7 894 aa16.17■□□□□ 0.18
PHRF1-202ENST00000413872 GSKIPQ9P0R6 139 aa16.17■□□□□ 0.18
PHRF1-202ENST00000413872 IL20RAQ9UHF4 553 aa16.17■□□□□ 0.18
PHRF1-202ENST00000413872 OR5K3A6NET4 321 aa16.17■□□□□ 0.18
PHRF1-202ENST00000413872 EEF1E1O43324 174 aaKnown RBP16.17■□□□□ 0.18
PHRF1-202ENST00000413872 ABOP16442 354 aa16.17■□□□□ 0.18
PHRF1-202ENST00000413872 FASLGP48023 281 aa16.17■□□□□ 0.18
PHRF1-202ENST00000413872 GNMTQ14749 295 aa16.17■□□□□ 0.18
PHRF1-202ENST00000413872 GRK1Q15835 563 aa16.17■□□□□ 0.18
PHRF1-202ENST00000413872 TMEM205Q6UW68 189 aa16.17■□□□□ 0.18
PHRF1-202ENST00000413872 CYB561A3Q8NBI2 242 aa16.17■□□□□ 0.18
PHRF1-202ENST00000413872 ZMYND19Q96E35 227 aaPredicted RBP16.17■□□□□ 0.18
PHRF1-202ENST00000413872 LCORQ96JN0 433 aaPredicted RBP16.17■□□□□ 0.18
PHRF1-202ENST00000413872 MYH7BA7E2Y1 1941 aa16.17■□□□□ 0.18
PHRF1-202ENST00000413872 VNN2O95498 520 aa16.16■□□□□ 0.18
PHRF1-202ENST00000413872 SYPL1Q16563 259 aa16.16■□□□□ 0.18
PHRF1-202ENST00000413872 AWAT2Q6E213 333 aa16.16■□□□□ 0.18
PHRF1-202ENST00000413872 BEND4Q6ZU67 534 aa16.16■□□□□ 0.18
PHRF1-202ENST00000413872 OR1E3Q8WZA6 343 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms