RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 CKAP2Q8WWK9 683 aa5.78□□□□□ -1.48
USP54-202ENST00000413442 XAGE5Q8WWM1 108 aa5.78□□□□□ -1.48
USP54-202ENST00000413442 JADE3Q92613 823 aa5.78□□□□□ -1.48
USP54-202ENST00000413442 CDS1Q92903 461 aa5.78□□□□□ -1.48
USP54-202ENST00000413442 CPNE4Q96A23 557 aaPredicted RBP5.78□□□□□ -1.48
USP54-202ENST00000413442 CHMP6Q96FZ7 201 aa5.78□□□□□ -1.48
USP54-202ENST00000413442 C16orf58Q96GQ5 468 aa5.78□□□□□ -1.48
USP54-202ENST00000413442 REXO5Q96IC2 774 aaKnown RBP5.78□□□□□ -1.48
USP54-202ENST00000413442 SLC35G5Q96KT7 338 aa5.78□□□□□ -1.48
USP54-202ENST00000413442 TRIB1Q96RU8 372 aa5.78□□□□□ -1.48
USP54-202ENST00000413442 SLC35A5Q9BS91 424 aa5.78□□□□□ -1.48
USP54-202ENST00000413442 HDHD5Q9BXW7 423 aa5.78□□□□□ -1.48
USP54-202ENST00000413442 ZNF350Q9GZX5 532 aa5.78□□□□□ -1.48
USP54-202ENST00000413442 PCNX3Q9H6A9 2034 aa5.78□□□□□ -1.48
USP54-202ENST00000413442 CACYBPQ9HB71 228 aaKnown RBP5.78□□□□□ -1.48
USP54-202ENST00000413442 MCCC2Q9HCC0 563 aa5.78□□□□□ -1.48
USP54-202ENST00000413442 MED4Q9NPJ6 270 aa5.78□□□□□ -1.48
USP54-202ENST00000413442 PLSCR4Q9NRQ2 329 aa5.78□□□□□ -1.48
USP54-202ENST00000413442 MED11Q9P086 117 aa5.78□□□□□ -1.48
USP54-202ENST00000413442 FBXL2Q9UKC9 423 aa5.78□□□□□ -1.48
USP54-202ENST00000413442 MCTS1Q9ULC4 181 aaKnown RBP5.78□□□□□ -1.48
USP54-202ENST00000413442 ICAM5Q9UMF0 924 aa5.78□□□□□ -1.48
USP54-202ENST00000413442 SLC6A5Q9Y345 797 aa5.78□□□□□ -1.48
USP54-202ENST00000413442 IFT52Q9Y366 437 aa5.78□□□□□ -1.48
USP54-202ENST00000413442 ZNF337Q9Y3M9 751 aa5.78□□□□□ -1.48
USP54-202ENST00000413442 WDR45Q9Y484 360 aa5.78□□□□□ -1.48
USP54-202ENST00000413442 LIPGQ9Y5X9 500 aa5.78□□□□□ -1.48
USP54-202ENST00000413442 USP9XQ93008 2570 aaPredicted RBP5.78□□□□□ -1.48
USP54-202ENST00000413442 LRRK2Q5S007 2527 aa5.78□□□□□ -1.48
USP54-202ENST00000413442 DOCK7Q96N67 2140 aa5.77□□□□□ -1.49
USP54-202ENST00000413442 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.77□□□□□ -1.49
USP54-202ENST00000413442 C2orf72A6NCS6 295 aa5.77□□□□□ -1.49
USP54-202ENST00000413442 SLC22A20A6NK97 555 aa5.77□□□□□ -1.49
USP54-202ENST00000413442 CLCA1A8K7I4 914 aa5.77□□□□□ -1.49
USP54-202ENST00000413442 A8MXE2 369 aa5.77□□□□□ -1.49
USP54-202ENST00000413442 EVPLLA8MZ36 301 aa5.77□□□□□ -1.49
USP54-202ENST00000413442 SCO2O43819 266 aa5.77□□□□□ -1.49
USP54-202ENST00000413442 DIAPH2O60879 1101 aa5.77□□□□□ -1.49
USP54-202ENST00000413442 SYNGR4O95473 234 aa5.77□□□□□ -1.49
USP54-202ENST00000413442 CNOT4O95628 575 aaKnown RBP5.77□□□□□ -1.49
USP54-202ENST00000413442 CPSF4O95639 269 aaKnown RBP5.77□□□□□ -1.49
USP54-202ENST00000413442 CSTAP01040 98 aa5.77□□□□□ -1.49
USP54-202ENST00000413442 IGKV1D-16P01601 117 aa5.77□□□□□ -1.49
USP54-202ENST00000413442 DBIP07108 87 aaKnown RBP5.77□□□□□ -1.49
USP54-202ENST00000413442 THBS1P07996 1170 aa5.77□□□□□ -1.49
USP54-202ENST00000413442 ALDOCP09972 364 aaKnown RBP5.77□□□□□ -1.49
USP54-202ENST00000413442 LINGO3P0C6S8 592 aa5.77□□□□□ -1.49
USP54-202ENST00000413442 RNF224P0DH78 156 aa5.77□□□□□ -1.49
USP54-202ENST00000413442 KITP10721 976 aa5.77□□□□□ -1.49
USP54-202ENST00000413442 UBL4AP11441 157 aa5.77□□□□□ -1.49
USP54-202ENST00000413442 BMP2P12643 396 aa5.77□□□□□ -1.49
USP54-202ENST00000413442 PPP3CBP16298 524 aa5.77□□□□□ -1.49
USP54-202ENST00000413442 SOAT1P35610 550 aa5.77□□□□□ -1.49
USP54-202ENST00000413442 DGKQP52824 942 aa5.77□□□□□ -1.49
USP54-202ENST00000413442 CRISP3P54108 245 aa5.77□□□□□ -1.49
USP54-202ENST00000413442 CARD18P57730 90 aa5.77□□□□□ -1.49
USP54-202ENST00000413442 B3GALT5-AS1P59052 145 aa5.77□□□□□ -1.49
USP54-202ENST00000413442 RAC3P60763 192 aa5.77□□□□□ -1.49
USP54-202ENST00000413442 UFM1P61960 85 aa5.77□□□□□ -1.49
USP54-202ENST00000413442 CSNK2A1P68400 391 aaPredicted RBP5.77□□□□□ -1.49
USP54-202ENST00000413442 PHC1P78364 1004 aa5.77□□□□□ -1.49
USP54-202ENST00000413442 KCNJ10P78508 379 aa5.77□□□□□ -1.49
USP54-202ENST00000413442 HPCAP84074 193 aa5.77□□□□□ -1.49
USP54-202ENST00000413442 PLPPR5Q32ZL2 321 aa5.77□□□□□ -1.49
USP54-202ENST00000413442 RAET1LQ5VY80 246 aa5.77□□□□□ -1.49
USP54-202ENST00000413442 OR5M10Q6IEU7 315 aa5.77□□□□□ -1.49
USP54-202ENST00000413442 FIGNL1Q6PIW4 674 aa5.77□□□□□ -1.49
USP54-202ENST00000413442 POMZP3Q6PJE2 187 aa5.77□□□□□ -1.49
USP54-202ENST00000413442 BLOC1S3Q6QNY0 202 aa5.77□□□□□ -1.49
USP54-202ENST00000413442 ARSKQ6UWY0 536 aa5.77□□□□□ -1.49
USP54-202ENST00000413442 APOOLQ6UXV4 268 aa5.77□□□□□ -1.49
USP54-202ENST00000413442 C3P1Q6ZMU1 363 aa5.77□□□□□ -1.49
USP54-202ENST00000413442 MEX3BQ6ZN04 569 aaKnown RBP5.77□□□□□ -1.49
USP54-202ENST00000413442 BEND4Q6ZU67 534 aa5.77□□□□□ -1.49
USP54-202ENST00000413442 FAM214BQ7L5A3 538 aa5.77□□□□□ -1.49
USP54-202ENST00000413442 P4HA3Q7Z4N8 544 aa5.77□□□□□ -1.49
USP54-202ENST00000413442 CCDC71Q8IV32 467 aaPredicted RBP5.77□□□□□ -1.49
USP54-202ENST00000413442 SLC30A8Q8IWU4 369 aa5.77□□□□□ -1.49
USP54-202ENST00000413442 MCEMP1Q8IX19 187 aa5.77□□□□□ -1.49
USP54-202ENST00000413442 PEX5LQ8IYB4 626 aa5.77□□□□□ -1.49
USP54-202ENST00000413442 LILRA2Q8N149 483 aa5.77□□□□□ -1.49
USP54-202ENST00000413442 ZNF619Q8N2I2 560 aa5.77□□□□□ -1.49
USP54-202ENST00000413442 PHOSPHO1Q8TCT1 267 aa5.77□□□□□ -1.49
USP54-202ENST00000413442 MGARPQ8TDB4 240 aa5.77□□□□□ -1.49
USP54-202ENST00000413442 GPR119Q8TDV5 335 aa5.77□□□□□ -1.49
USP54-202ENST00000413442 ZFP90Q8TF47 636 aa5.77□□□□□ -1.49
USP54-202ENST00000413442 ROPN1LQ96C74 230 aa5.77□□□□□ -1.49
USP54-202ENST00000413442 GMPPAQ96IJ6 420 aaPredicted RBP5.77□□□□□ -1.49
USP54-202ENST00000413442 SH3GL1Q99961 368 aa5.77□□□□□ -1.49
USP54-202ENST00000413442 TUBA1CQ9BQE3 449 aa5.77□□□□□ -1.49
USP54-202ENST00000413442 SPATA5L1Q9BVQ7 753 aa5.77□□□□□ -1.49
USP54-202ENST00000413442 PRRG4Q9BZD6 226 aa5.77□□□□□ -1.49
USP54-202ENST00000413442 OR51I1Q9H343 314 aa5.77□□□□□ -1.49
USP54-202ENST00000413442 PIF1Q9H611 641 aa5.77□□□□□ -1.49
USP54-202ENST00000413442 WDR55Q9H6Y2 383 aaPredicted RBP5.77□□□□□ -1.49
USP54-202ENST00000413442 RNF122Q9H9V4 155 aa5.77□□□□□ -1.49
USP54-202ENST00000413442 BCL2L10Q9HD36 194 aa5.77□□□□□ -1.49
USP54-202ENST00000413442 CLCF1Q9UBD9 225 aa5.77□□□□□ -1.49
USP54-202ENST00000413442 P2RX2Q9UBL9 471 aa5.77□□□□□ -1.49
USP54-202ENST00000413442 GIMAP2Q9UG22 337 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms