RNA–Protein interactions for RNA: ENST00000413040.6

NUB1-201, Transcript of negative regulator of ubiquitin like proteins 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NUB1, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUB1-201ENST00000413040 MAGEB4O15481 346 aaPredicted RBP12.85□□□□□ -0.35
NUB1-201ENST00000413040 PLOD3O60568 738 aa12.85□□□□□ -0.35
NUB1-201ENST00000413040 CHRNB1P11230 501 aa12.85□□□□□ -0.35
NUB1-201ENST00000413040 CPMP14384 443 aa12.85□□□□□ -0.35
NUB1-201ENST00000413040 TFF2Q03403 129 aa12.85□□□□□ -0.35
NUB1-201ENST00000413040 NNATQ16517 81 aa12.85□□□□□ -0.35
NUB1-201ENST00000413040 DUSP6Q16828 381 aa12.85□□□□□ -0.35
NUB1-201ENST00000413040 ZNF628Q5EBL2 1059 aa12.85□□□□□ -0.35
NUB1-201ENST00000413040 RPTNQ6XPR3 784 aa12.85□□□□□ -0.35
NUB1-201ENST00000413040 KRT74Q7RTS7 529 aa12.85□□□□□ -0.35
NUB1-201ENST00000413040 RERGQ96A58 199 aaPredicted RBP12.85□□□□□ -0.35
NUB1-201ENST00000413040 KIR3DX1Q9H7L2 352 aa12.85□□□□□ -0.35
NUB1-201ENST00000413040 MRPS18AQ9NVS2 196 aaKnown RBP12.85□□□□□ -0.35
NUB1-201ENST00000413040 SIRT4Q9Y6E7 314 aaPredicted RBP12.85□□□□□ -0.35
NUB1-201ENST00000413040 PRR23D1E9PI22 279 aaPredicted RBP12.85□□□□□ -0.35
NUB1-201ENST00000413040 STX11O75558 287 aa12.85□□□□□ -0.35
NUB1-201ENST00000413040 PRR23D2P0DMB1 279 aaPredicted RBP12.85□□□□□ -0.35
NUB1-201ENST00000413040 SRSF5Q13243 272 aaKnown RBP12.85□□□□□ -0.35
NUB1-201ENST00000413040 DEFB110Q30KQ9 67 aa12.85□□□□□ -0.35
NUB1-201ENST00000413040 DCST2Q5T1A1 773 aa12.85□□□□□ -0.35
NUB1-201ENST00000413040 PRAMEF8Q5VWM4 474 aa12.85□□□□□ -0.35
NUB1-201ENST00000413040 PRAMEF7Q5VXH5 474 aa12.85□□□□□ -0.35
NUB1-201ENST00000413040 MZT2BQ6NZ67 158 aa12.85□□□□□ -0.35
NUB1-201ENST00000413040 THSD4Q6ZMP0 1018 aa12.85□□□□□ -0.35
NUB1-201ENST00000413040 ASCC1Q8N9N2 400 aaKnown RBP12.85□□□□□ -0.35
NUB1-201ENST00000413040 CHAC2Q8WUX2 184 aa12.85□□□□□ -0.35
NUB1-201ENST00000413040 ATF6BQ99941 703 aa12.85□□□□□ -0.35
NUB1-201ENST00000413040 USP34Q70CQ2 3546 aa12.85□□□□□ -0.35
NUB1-201ENST00000413040 FAM86C2PA6NEL3 165 aa12.84□□□□□ -0.35
NUB1-201ENST00000413040 GTPBP1O00178 669 aaKnown RBP12.84□□□□□ -0.35
NUB1-201ENST00000413040 LINC01565O15544 149 aa12.84□□□□□ -0.35
NUB1-201ENST00000413040 LYRM1O43325 122 aa12.84□□□□□ -0.35
NUB1-201ENST00000413040 FGF17O60258 216 aa12.84□□□□□ -0.35
NUB1-201ENST00000413040 CDC123O75794 336 aaPredicted RBP12.84□□□□□ -0.35
NUB1-201ENST00000413040 KLF8O95600 359 aaPredicted RBP12.84□□□□□ -0.35
NUB1-201ENST00000413040 PAHP00439 452 aa12.84□□□□□ -0.35
NUB1-201ENST00000413040 ZGLP1P0C6A0 271 aa12.84□□□□□ -0.35
NUB1-201ENST00000413040 NTSR1P30989 418 aa12.84□□□□□ -0.35
NUB1-201ENST00000413040 FGF9P31371 208 aaPredicted RBP12.84□□□□□ -0.35
NUB1-201ENST00000413040 ACSL1P33121 698 aa12.84□□□□□ -0.35
NUB1-201ENST00000413040 PRPF38BQ5VTL8 546 aaKnown RBP12.84□□□□□ -0.35
NUB1-201ENST00000413040 SYCE2Q6PIF2 218 aa12.84□□□□□ -0.35
NUB1-201ENST00000413040 CADM2Q8N3J6 435 aa12.84□□□□□ -0.35
NUB1-201ENST00000413040 DACT3Q96B18 629 aaPredicted RBP12.84□□□□□ -0.35
NUB1-201ENST00000413040 SENP5Q96HI0 755 aaPredicted RBP12.84□□□□□ -0.35
NUB1-201ENST00000413040 HS6ST2Q96MM7 605 aa12.84□□□□□ -0.35
NUB1-201ENST00000413040 PTCHD1Q96NR3 888 aa12.84□□□□□ -0.35
NUB1-201ENST00000413040 B3GAT2Q9NPZ5 323 aa12.84□□□□□ -0.35
NUB1-201ENST00000413040 REV3LO60673 3130 aa12.84□□□□□ -0.35
NUB1-201ENST00000413040 DOCK8Q8NF50 2099 aa12.84□□□□□ -0.35
NUB1-201ENST00000413040 GXYLT2A0PJZ3 443 aa12.84□□□□□ -0.35
NUB1-201ENST00000413040 URADA6NGE7 173 aa12.84□□□□□ -0.35
NUB1-201ENST00000413040 C5orf67F2Z3F1 127 aa12.84□□□□□ -0.35
NUB1-201ENST00000413040 UGT2B7P16662 529 aa12.84□□□□□ -0.35
NUB1-201ENST00000413040 COL9A1P20849 921 aa12.84□□□□□ -0.35
NUB1-201ENST00000413040 HTR2AP28223 471 aa12.84□□□□□ -0.35
NUB1-201ENST00000413040 ZNF136P52737 540 aa12.84□□□□□ -0.35
NUB1-201ENST00000413040 SAMD12Q8N8I0 201 aa12.84□□□□□ -0.35
NUB1-201ENST00000413040 PHOSPHO2Q8TCD6 241 aa12.84□□□□□ -0.35
NUB1-201ENST00000413040 HERVK_113Q902F9 699 aa12.84□□□□□ -0.35
NUB1-201ENST00000413040 NR4A3Q92570 626 aa12.84□□□□□ -0.35
NUB1-201ENST00000413040 RNF32Q9H0A6 362 aa12.84□□□□□ -0.35
NUB1-201ENST00000413040 BABAM2Q9NXR7 383 aa12.84□□□□□ -0.35
NUB1-201ENST00000413040 A0A0B4J293 547 aa12.83□□□□□ -0.35
NUB1-201ENST00000413040 A0A0G2JMP0 313 aa12.83□□□□□ -0.35
NUB1-201ENST00000413040 A0A0X1KG70 313 aa12.83□□□□□ -0.35
NUB1-201ENST00000413040 E9PI62 339 aa12.83□□□□□ -0.35
NUB1-201ENST00000413040 H0YGG7 62 aa12.83□□□□□ -0.35
NUB1-201ENST00000413040 TYRP1P17643 537 aa12.83□□□□□ -0.35
NUB1-201ENST00000413040 TBXA2RP21731 343 aa12.83□□□□□ -0.35
NUB1-201ENST00000413040 SDHBP21912 280 aa12.83□□□□□ -0.35
NUB1-201ENST00000413040 TALDO1P37837 337 aa12.83□□□□□ -0.35
NUB1-201ENST00000413040 PBX2P40425 430 aa12.83□□□□□ -0.35
NUB1-201ENST00000413040 EVX1P49640 407 aa12.83□□□□□ -0.35
NUB1-201ENST00000413040 OR10A3P58181 314 aa12.83□□□□□ -0.35
NUB1-201ENST00000413040 ARF3P61204 181 aaPredicted RBP12.83□□□□□ -0.35
NUB1-201ENST00000413040 GPR18Q14330 331 aa12.83□□□□□ -0.35
NUB1-201ENST00000413040 EIPR1Q53HC9 387 aa12.83□□□□□ -0.35
NUB1-201ENST00000413040 TMEM91Q6ZNR0 172 aa12.83□□□□□ -0.35
NUB1-201ENST00000413040 TMEM52Q8NDY8 209 aa12.83□□□□□ -0.35
NUB1-201ENST00000413040 OR4M2Q8NGB6 313 aa12.83□□□□□ -0.35
NUB1-201ENST00000413040 SLC22A18Q96BI1 424 aa12.83□□□□□ -0.35
NUB1-201ENST00000413040 BPIFA2Q96DR5 249 aa12.83□□□□□ -0.35
NUB1-201ENST00000413040 RNF31Q96EP0 1072 aa12.83□□□□□ -0.35
NUB1-201ENST00000413040 OR2A5Q96R48 311 aa12.83□□□□□ -0.35
NUB1-201ENST00000413040 CCDC3Q9BQI4 270 aa12.83□□□□□ -0.35
NUB1-201ENST00000413040 MED18Q9BUE0 208 aa12.83□□□□□ -0.35
NUB1-201ENST00000413040 MCOLN1Q9GZU1 580 aa12.83□□□□□ -0.35
NUB1-201ENST00000413040 NPAP1Q9NZP6 1156 aa12.83□□□□□ -0.35
NUB1-201ENST00000413040 KCMF1Q9P0J7 381 aa12.83□□□□□ -0.35
NUB1-201ENST00000413040 SPACA6W5XKT8 324 aa12.83□□□□□ -0.35
NUB1-201ENST00000413040 K7EQS6 105 aa12.83□□□□□ -0.36
NUB1-201ENST00000413040 RNF13O43567 381 aa12.83□□□□□ -0.36
NUB1-201ENST00000413040 PLRG1O43660 514 aaKnown RBP12.83□□□□□ -0.36
NUB1-201ENST00000413040 OR10H2O60403 315 aa12.83□□□□□ -0.36
NUB1-201ENST00000413040 CPNE3O75131 537 aaKnown RBP12.83□□□□□ -0.36
NUB1-201ENST00000413040 PPP1R3DO95685 299 aa12.83□□□□□ -0.36
NUB1-201ENST00000413040 ZNF24P17028 368 aa12.83□□□□□ -0.36
NUB1-201ENST00000413040 ELK1P19419 428 aa12.83□□□□□ -0.36
NUB1-201ENST00000413040 EN2P19622 333 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms