RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 IGHV4-39P01824 125 aa14.86□□□□□ -0.03
MRPL55-220ENST00000411464 YES1P07947 543 aa14.86□□□□□ -0.03
MRPL55-220ENST00000411464 LINGO3P0C6S8 592 aa14.86□□□□□ -0.03
MRPL55-220ENST00000411464 ACP2P11117 423 aa14.86□□□□□ -0.03
MRPL55-220ENST00000411464 PRIM2P49643 509 aa14.86□□□□□ -0.03
MRPL55-220ENST00000411464 NAA20P61599 178 aa14.86□□□□□ -0.03
MRPL55-220ENST00000411464 CFAP157Q5JU67 520 aa14.86□□□□□ -0.03
MRPL55-220ENST00000411464 DNAJC14Q6Y2X3 702 aaPredicted RBP14.86□□□□□ -0.03
MRPL55-220ENST00000411464 ZAR1Q86SH2 424 aa14.86□□□□□ -0.03
MRPL55-220ENST00000411464 COX18Q8N8Q8 333 aa14.86□□□□□ -0.03
MRPL55-220ENST00000411464 BANPQ8N9N5 519 aa14.86□□□□□ -0.03
MRPL55-220ENST00000411464 ACMSDQ8TDX5 336 aa14.86□□□□□ -0.03
MRPL55-220ENST00000411464 TMEM158Q8WZ71 300 aa14.86□□□□□ -0.03
MRPL55-220ENST00000411464 LRTM1Q9HBL6 345 aa14.86□□□□□ -0.03
MRPL55-220ENST00000411464 BARX1Q9HBU1 254 aaPredicted RBP14.86□□□□□ -0.03
MRPL55-220ENST00000411464 GP6Q9HCN6 339 aa14.86□□□□□ -0.03
MRPL55-220ENST00000411464 SH3BP4Q9P0V3 963 aa14.86□□□□□ -0.03
MRPL55-220ENST00000411464 NTMQ9P121 344 aa14.86□□□□□ -0.03
MRPL55-220ENST00000411464 DCDC2Q9UHG0 476 aa14.86□□□□□ -0.03
MRPL55-220ENST00000411464 RTTNQ86VV8 2226 aa14.86□□□□□ -0.03
MRPL55-220ENST00000411464 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.85□□□□□ -0.03
MRPL55-220ENST00000411464 A0A1W2PQD3 144 aa14.85□□□□□ -0.03
MRPL55-220ENST00000411464 ZNF195O14628 629 aa14.85□□□□□ -0.03
MRPL55-220ENST00000411464 AKAP10O43572 662 aa14.85□□□□□ -0.03
MRPL55-220ENST00000411464 ADAM11O75078 769 aa14.85□□□□□ -0.03
MRPL55-220ENST00000411464 URI1O94763 535 aaPredicted RBP14.85□□□□□ -0.03
MRPL55-220ENST00000411464 HSPA4LO95757 839 aa14.85□□□□□ -0.03
MRPL55-220ENST00000411464 MYL2P10916 166 aa14.85□□□□□ -0.03
MRPL55-220ENST00000411464 PYGBP11216 843 aa14.85□□□□□ -0.03
MRPL55-220ENST00000411464 ELK4P28324 431 aa14.85□□□□□ -0.03
MRPL55-220ENST00000411464 GCAP28676 217 aa14.85□□□□□ -0.03
MRPL55-220ENST00000411464 BSPH1Q075Z2 132 aa14.85□□□□□ -0.03
MRPL55-220ENST00000411464 FOXF1Q12946 379 aa14.85□□□□□ -0.03
MRPL55-220ENST00000411464 ITGADQ13349 1161 aa14.85□□□□□ -0.03
MRPL55-220ENST00000411464 DUSP5Q16690 384 aa14.85□□□□□ -0.03
MRPL55-220ENST00000411464 PGGHGQ32M88 737 aa14.85□□□□□ -0.03
MRPL55-220ENST00000411464 TMEM176BQ3YBM2 270 aaPredicted RBP14.85□□□□□ -0.03
MRPL55-220ENST00000411464 CHRFAM7AQ494W8 412 aa14.85□□□□□ -0.03
MRPL55-220ENST00000411464 ZCCHC12Q6PEW1 402 aa14.85□□□□□ -0.03
MRPL55-220ENST00000411464 FCRLAQ7L513 359 aa14.85□□□□□ -0.03
MRPL55-220ENST00000411464 KBTBD8Q8NFY9 601 aa14.85□□□□□ -0.03
MRPL55-220ENST00000411464 PIWIL2Q8TC59 973 aaKnown RBP14.85□□□□□ -0.03
MRPL55-220ENST00000411464 JADE3Q92613 823 aa14.85□□□□□ -0.03
MRPL55-220ENST00000411464 GIMAP5Q96F15 307 aa14.85□□□□□ -0.03
MRPL55-220ENST00000411464 ZNF764Q96H86 408 aaPredicted RBP14.85□□□□□ -0.03
MRPL55-220ENST00000411464 SRXN1Q9BYN0 137 aa14.85□□□□□ -0.03
MRPL55-220ENST00000411464 POTEKPQ9BYX7 375 aa14.85□□□□□ -0.03
MRPL55-220ENST00000411464 REEP4Q9H6H4 257 aa14.85□□□□□ -0.03
MRPL55-220ENST00000411464 FAIMQ9NVQ4 179 aa14.85□□□□□ -0.03
MRPL55-220ENST00000411464 C1orf109Q9NX04 203 aa14.85□□□□□ -0.03
MRPL55-220ENST00000411464 DPRXA6NFQ7 191 aa14.84□□□□□ -0.03
MRPL55-220ENST00000411464 A8MV72 311 aaPredicted RBP14.84□□□□□ -0.03
MRPL55-220ENST00000411464 SLC28A1O00337 649 aa14.84□□□□□ -0.03
MRPL55-220ENST00000411464 RGS14O43566 566 aa14.84□□□□□ -0.03
MRPL55-220ENST00000411464 ABHD2P08910 425 aa14.84□□□□□ -0.03
MRPL55-220ENST00000411464 UROSP10746 265 aa14.84□□□□□ -0.03
MRPL55-220ENST00000411464 SHC1P29353 583 aa14.84□□□□□ -0.03
MRPL55-220ENST00000411464 ECHS1P30084 290 aa14.84□□□□□ -0.03
MRPL55-220ENST00000411464 POU6F2P78424 691 aaPredicted RBP14.84□□□□□ -0.03
MRPL55-220ENST00000411464 KIAA0040Q15053 153 aa14.84□□□□□ -0.03
MRPL55-220ENST00000411464 CD226Q15762 336 aa14.84□□□□□ -0.03
MRPL55-220ENST00000411464 WHAMMP3Q1A5X7 153 aa14.84□□□□□ -0.03
MRPL55-220ENST00000411464 CCNJQ5T5M9 372 aa14.84□□□□□ -0.03
MRPL55-220ENST00000411464 BHLHA15Q7RTS1 189 aaPredicted RBP14.84□□□□□ -0.03
MRPL55-220ENST00000411464 MTERF4Q7Z6M4 381 aaKnown RBP14.84□□□□□ -0.03
MRPL55-220ENST00000411464 ATG4DQ86TL0 474 aaPredicted RBP14.84□□□□□ -0.03
MRPL55-220ENST00000411464 SLC43A2Q8N370 569 aa14.84□□□□□ -0.03
MRPL55-220ENST00000411464 ATP6V1C2Q8NEY4 427 aa14.84□□□□□ -0.03
MRPL55-220ENST00000411464 PHOSPHO1Q8TCT1 267 aa14.84□□□□□ -0.03
MRPL55-220ENST00000411464 CHMP6Q96FZ7 201 aa14.84□□□□□ -0.03
MRPL55-220ENST00000411464 C16orf58Q96GQ5 468 aa14.84□□□□□ -0.03
MRPL55-220ENST00000411464 KLHDC3Q9BQ90 382 aa14.84□□□□□ -0.03
MRPL55-220ENST00000411464 RHNO1Q9BSD3 238 aa14.84□□□□□ -0.03
MRPL55-220ENST00000411464 BTBD2Q9BX70 525 aa14.84□□□□□ -0.03
MRPL55-220ENST00000411464 TRIM2Q9C040 744 aa14.84□□□□□ -0.03
MRPL55-220ENST00000411464 ACSS1Q9NUB1 689 aaPredicted RBP14.84□□□□□ -0.03
MRPL55-220ENST00000411464 CISD1Q9NZ45 108 aaKnown RBP14.84□□□□□ -0.03
MRPL55-220ENST00000411464 CCL27Q9Y4X3 112 aa14.84□□□□□ -0.03
MRPL55-220ENST00000411464 SONP18583 2426 aaKnown RBP14.84□□□□□ -0.03
MRPL55-220ENST00000411464 G3V2L1 256 aa14.83□□□□□ -0.04
MRPL55-220ENST00000411464 H3BNH8 94 aa14.83□□□□□ -0.04
MRPL55-220ENST00000411464 EFNA2O43921 213 aa14.83□□□□□ -0.04
MRPL55-220ENST00000411464 NDUFS7O75251 213 aa14.83□□□□□ -0.04
MRPL55-220ENST00000411464 ATP6V1C1P21283 382 aa14.83□□□□□ -0.04
MRPL55-220ENST00000411464 PRPH2P23942 346 aa14.83□□□□□ -0.04
MRPL55-220ENST00000411464 ZNF117Q03924 483 aa14.83□□□□□ -0.04
MRPL55-220ENST00000411464 STK11Q15831 433 aa14.83□□□□□ -0.04
MRPL55-220ENST00000411464 ZNF385BQ569K4 471 aa14.83□□□□□ -0.04
MRPL55-220ENST00000411464 LRIG3Q6UXM1 1119 aa14.83□□□□□ -0.04
MRPL55-220ENST00000411464 ZYG11AQ6WRX3 759 aa14.83□□□□□ -0.04
MRPL55-220ENST00000411464 DNM1P46Q6ZS02 220 aa14.83□□□□□ -0.04
MRPL55-220ENST00000411464 FRMD7Q6ZUT3 714 aa14.83□□□□□ -0.04
MRPL55-220ENST00000411464 TDRPQ86YL5 185 aa14.83□□□□□ -0.04
MRPL55-220ENST00000411464 PHC2Q8IXK0 858 aa14.83□□□□□ -0.04
MRPL55-220ENST00000411464 ZNF527Q8NB42 609 aa14.83□□□□□ -0.04
MRPL55-220ENST00000411464 FBXO27Q8NI29 283 aa14.83□□□□□ -0.04
MRPL55-220ENST00000411464 MUCL1Q96DR8 90 aa14.83□□□□□ -0.04
MRPL55-220ENST00000411464 OTUB1Q96FW1 271 aaPredicted RBP14.83□□□□□ -0.04
MRPL55-220ENST00000411464 TSSK3Q96PN8 268 aa14.83□□□□□ -0.04
MRPL55-220ENST00000411464 CCT7Q99832 543 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms