RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 HEMK1Q9Y5R4 338 aaPredicted RBP6.94□□□□□ -1.3
CXCR4-202ENST00000409817 IGHV5-51A0A0C4DH38 117 aa6.94□□□□□ -1.3
CXCR4-202ENST00000409817 K7ESF4 209 aa6.94□□□□□ -1.3
CXCR4-202ENST00000409817 M0R3G1 203 aa6.94□□□□□ -1.3
CXCR4-202ENST00000409817 KCNK2O95069 426 aa6.94□□□□□ -1.3
CXCR4-202ENST00000409817 SOX14O95416 240 aa6.94□□□□□ -1.3
CXCR4-202ENST00000409817 LCKP06239 509 aa6.94□□□□□ -1.3
CXCR4-202ENST00000409817 STSP08842 583 aa6.94□□□□□ -1.3
CXCR4-202ENST00000409817 ADORA3P0DMS8 318 aa6.94□□□□□ -1.3
CXCR4-202ENST00000409817 DRD5P21918 477 aa6.94□□□□□ -1.3
CXCR4-202ENST00000409817 UGT2B10P36537 528 aa6.94□□□□□ -1.3
CXCR4-202ENST00000409817 ARRB1P49407 418 aaPredicted RBP6.94□□□□□ -1.3
CXCR4-202ENST00000409817 PPM1FP49593 454 aaPredicted RBP6.94□□□□□ -1.3
CXCR4-202ENST00000409817 CSNK1EP49674 416 aaKnown RBP6.94□□□□□ -1.3
CXCR4-202ENST00000409817 EMDP50402 254 aa6.94□□□□□ -1.3
CXCR4-202ENST00000409817 ZNF136P52737 540 aa6.94□□□□□ -1.3
CXCR4-202ENST00000409817 NUDT6P53370 316 aa6.94□□□□□ -1.3
CXCR4-202ENST00000409817 HSD11B2P80365 405 aa6.94□□□□□ -1.3
CXCR4-202ENST00000409817 EFNB1P98172 346 aa6.94□□□□□ -1.3
CXCR4-202ENST00000409817 PSG6Q00889 435 aa6.94□□□□□ -1.3
CXCR4-202ENST00000409817 MN1Q10571 1320 aaPredicted RBP6.94□□□□□ -1.3
CXCR4-202ENST00000409817 FUT7Q11130 342 aa6.94□□□□□ -1.3
CXCR4-202ENST00000409817 DGUOKQ16854 277 aa6.94□□□□□ -1.3
CXCR4-202ENST00000409817 KLHL22Q53GT1 634 aa6.94□□□□□ -1.3
CXCR4-202ENST00000409817 MRPL2Q5T653 305 aaKnown RBP6.94□□□□□ -1.3
CXCR4-202ENST00000409817 GDF7Q7Z4P5 450 aa6.94□□□□□ -1.3
CXCR4-202ENST00000409817 WDR53Q7Z5U6 358 aaPredicted RBP6.94□□□□□ -1.3
CXCR4-202ENST00000409817 SLC43A2Q8N370 569 aa6.94□□□□□ -1.3
CXCR4-202ENST00000409817 OR7G1Q8NGA0 311 aa6.94□□□□□ -1.3
CXCR4-202ENST00000409817 TBC1D15Q8TC07 691 aa6.94□□□□□ -1.3
CXCR4-202ENST00000409817 CEP192Q8TEP8 1941 aa6.94□□□□□ -1.3
CXCR4-202ENST00000409817 BORCS5Q969J3 196 aa6.94□□□□□ -1.3
CXCR4-202ENST00000409817 MMABQ96EY8 250 aaPredicted RBP6.94□□□□□ -1.3
CXCR4-202ENST00000409817 VMP1Q96GC9 406 aa6.94□□□□□ -1.3
CXCR4-202ENST00000409817 PEX11GQ96HA9 241 aa6.94□□□□□ -1.3
CXCR4-202ENST00000409817 TMEM80Q96HE8 168 aa6.94□□□□□ -1.3
CXCR4-202ENST00000409817 VSTM2LQ96N03 204 aa6.94□□□□□ -1.3
CXCR4-202ENST00000409817 ZNF559Q9BR84 538 aa6.94□□□□□ -1.3
CXCR4-202ENST00000409817 ALOXE3Q9BYJ1 711 aa6.94□□□□□ -1.3
CXCR4-202ENST00000409817 FOLH1BQ9HBA9 442 aa6.94□□□□□ -1.3
CXCR4-202ENST00000409817 AMBNQ9NP70 447 aa6.94□□□□□ -1.3
CXCR4-202ENST00000409817 MRPS18AQ9NVS2 196 aaKnown RBP6.94□□□□□ -1.3
CXCR4-202ENST00000409817 IRAK4Q9NWZ3 460 aa6.94□□□□□ -1.3
CXCR4-202ENST00000409817 HCN3Q9P1Z3 774 aa6.94□□□□□ -1.3
CXCR4-202ENST00000409817 LRIT1Q9P2V4 623 aa6.94□□□□□ -1.3
CXCR4-202ENST00000409817 CFL2Q9Y281 166 aa6.94□□□□□ -1.3
CXCR4-202ENST00000409817 ERGIC3Q9Y282 383 aa6.94□□□□□ -1.3
CXCR4-202ENST00000409817 SIT1Q9Y3P8 196 aa6.94□□□□□ -1.3
CXCR4-202ENST00000409817 IGHV1OR21-1A0A087WYE8 117 aa6.93□□□□□ -1.3
CXCR4-202ENST00000409817 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.93□□□□□ -1.3
CXCR4-202ENST00000409817 RGS13O14921 159 aa6.93□□□□□ -1.3
CXCR4-202ENST00000409817 TOX3O15405 576 aaPredicted RBP6.93□□□□□ -1.3
CXCR4-202ENST00000409817 PRODHO43272 600 aa6.93□□□□□ -1.3
CXCR4-202ENST00000409817 FRS3O43559 492 aa6.93□□□□□ -1.3
CXCR4-202ENST00000409817 DYRK3O43781 588 aa6.93□□□□□ -1.3
CXCR4-202ENST00000409817 ENTPD6O75354 484 aa6.93□□□□□ -1.3
CXCR4-202ENST00000409817 HMGN1P05114 100 aa6.93□□□□□ -1.3
CXCR4-202ENST00000409817 RPLP0P05388 317 aaKnown RBP6.93□□□□□ -1.3
CXCR4-202ENST00000409817 GNSP15586 552 aa6.93□□□□□ -1.3
CXCR4-202ENST00000409817 PNLIPP16233 465 aa6.93□□□□□ -1.3
CXCR4-202ENST00000409817 CSTF2P33240 577 aaKnown RBP eCLIP6.93□□□□□ -1.3
CXCR4-202ENST00000409817 TGFBR2P37173 567 aa6.93□□□□□ -1.3
CXCR4-202ENST00000409817 GFERP55789 205 aa6.93□□□□□ -1.3
CXCR4-202ENST00000409817 OCA2Q04671 838 aa6.93□□□□□ -1.3
CXCR4-202ENST00000409817 AQP6Q13520 282 aa6.93□□□□□ -1.3
CXCR4-202ENST00000409817 SPCS2Q15005 226 aa6.93□□□□□ -1.3
CXCR4-202ENST00000409817 EXOSC7Q15024 291 aaKnown RBP6.93□□□□□ -1.3
CXCR4-202ENST00000409817 ZNF141Q15928 474 aa6.93□□□□□ -1.3
CXCR4-202ENST00000409817 SNAPC1Q16533 368 aa6.93□□□□□ -1.3
CXCR4-202ENST00000409817 FLYWCH1Q4VC44 716 aa6.93□□□□□ -1.3
CXCR4-202ENST00000409817 CCNJQ5T5M9 372 aa6.93□□□□□ -1.3
CXCR4-202ENST00000409817 SLC6A19Q695T7 634 aa6.93□□□□□ -1.3
CXCR4-202ENST00000409817 WDR74Q6RFH5 385 aaPredicted RBP6.93□□□□□ -1.3
CXCR4-202ENST00000409817 ZNF550Q7Z398 422 aa6.93□□□□□ -1.3
CXCR4-202ENST00000409817 SLC46A3Q7Z3Q1 461 aa6.93□□□□□ -1.3
CXCR4-202ENST00000409817 PRSS42Q7Z5A4 293 aa6.93□□□□□ -1.3
CXCR4-202ENST00000409817 HMGN2P46Q86SG4 172 aa6.93□□□□□ -1.3
CXCR4-202ENST00000409817 CDK20Q8IZL9 346 aa6.93□□□□□ -1.3
CXCR4-202ENST00000409817 NLGN4XQ8N0W4 816 aa6.93□□□□□ -1.3
CXCR4-202ENST00000409817 D2HGDHQ8N465 521 aa6.93□□□□□ -1.3
CXCR4-202ENST00000409817 TCEANCQ8N8B7 351 aa6.93□□□□□ -1.3
CXCR4-202ENST00000409817 SIMC1Q8NDZ2 872 aa6.93□□□□□ -1.3
CXCR4-202ENST00000409817 PROKR2Q8NFJ6 384 aa6.93□□□□□ -1.3
CXCR4-202ENST00000409817 OR51Q1Q8NH59 317 aa6.93□□□□□ -1.3
CXCR4-202ENST00000409817 WDR36Q8NI36 951 aaKnown RBP6.93□□□□□ -1.3
CXCR4-202ENST00000409817 TMEM163Q8TC26 289 aa6.93□□□□□ -1.3
CXCR4-202ENST00000409817 THAP3Q8WTV1 239 aaPredicted RBP6.93□□□□□ -1.3
CXCR4-202ENST00000409817 S100ZQ8WXG8 99 aa6.93□□□□□ -1.3
CXCR4-202ENST00000409817 PIK3R3Q92569 461 aa6.93□□□□□ -1.3
CXCR4-202ENST00000409817 RFKQ969G6 155 aa6.93□□□□□ -1.3
CXCR4-202ENST00000409817 LGALS12Q96DT0 336 aa6.93□□□□□ -1.3
CXCR4-202ENST00000409817 IL4I1Q96RQ9 567 aa6.93□□□□□ -1.3
CXCR4-202ENST00000409817 DUSP23Q9BVJ7 150 aa6.93□□□□□ -1.3
CXCR4-202ENST00000409817 MND1Q9BWT6 205 aa6.93□□□□□ -1.3
CXCR4-202ENST00000409817 TRIM2Q9C040 744 aa6.93□□□□□ -1.3
CXCR4-202ENST00000409817 TMEM27Q9HBJ8 222 aa6.93□□□□□ -1.3
CXCR4-202ENST00000409817 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.93□□□□□ -1.3
CXCR4-202ENST00000409817 TVP23BQ9NYZ1 205 aa6.93□□□□□ -1.3
CXCR4-202ENST00000409817 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.93□□□□□ -1.3
CXCR4-202ENST00000409817 CDH10Q9Y6N8 788 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms