RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 MAPK14Q16539 360 aa15.1■□□□□ 0.01
TSPAN4-208ENST00000409531 PRR30Q53SZ7 412 aaPredicted RBP15.1■□□□□ 0.01
TSPAN4-208ENST00000409531 C1orf146Q5VVC0 180 aa15.1■□□□□ 0.01
TSPAN4-208ENST00000409531 SPINK14Q6IE38 97 aa15.1■□□□□ 0.01
TSPAN4-208ENST00000409531 SLC25A25Q6KCM7 469 aa15.1■□□□□ 0.01
TSPAN4-208ENST00000409531 DHRS4L2Q6PKH6 230 aa15.1■□□□□ 0.01
TSPAN4-208ENST00000409531 ZNF227Q86WZ6 799 aa15.1■□□□□ 0.01
TSPAN4-208ENST00000409531 VRK2Q86Y07 508 aa15.1■□□□□ 0.01
TSPAN4-208ENST00000409531 GALNT11Q8NCW6 608 aa15.1■□□□□ 0.01
TSPAN4-208ENST00000409531 PHOSPHO1Q8TCT1 267 aa15.1■□□□□ 0.01
TSPAN4-208ENST00000409531 TAMM41Q96BW9 452 aa15.1■□□□□ 0.01
TSPAN4-208ENST00000409531 DOHHQ9BU89 302 aa15.1■□□□□ 0.01
TSPAN4-208ENST00000409531 ANGPTL4Q9BY76 406 aa15.1■□□□□ 0.01
TSPAN4-208ENST00000409531 DCAF13Q9NV06 445 aaKnown RBP15.1■□□□□ 0.01
TSPAN4-208ENST00000409531 ASF1BQ9NVP2 202 aa15.1■□□□□ 0.01
TSPAN4-208ENST00000409531 KLHL28Q9NXS3 571 aa15.1■□□□□ 0.01
TSPAN4-208ENST00000409531 WIF1Q9Y5W5 379 aa15.1■□□□□ 0.01
TSPAN4-208ENST00000409531 KLRC4-KLRK1H3BQV0 150 aa15.09■□□□□ 0.01
TSPAN4-208ENST00000409531 GTPBP1O00178 669 aaKnown RBP15.09■□□□□ 0.01
TSPAN4-208ENST00000409531 SYT5O00445 386 aa15.09■□□□□ 0.01
TSPAN4-208ENST00000409531 SCO2O43819 266 aa15.09■□□□□ 0.01
TSPAN4-208ENST00000409531 ZNF682O95780 498 aa15.09■□□□□ 0.01
TSPAN4-208ENST00000409531 CSTAP01040 98 aa15.09■□□□□ 0.01
TSPAN4-208ENST00000409531 OPN1SWP03999 348 aa15.09■□□□□ 0.01
TSPAN4-208ENST00000409531 C8BP07358 591 aa15.09■□□□□ 0.01
TSPAN4-208ENST00000409531 SP1P08047 785 aa15.09■□□□□ 0.01
TSPAN4-208ENST00000409531 CNR1P21554 472 aa15.09■□□□□ 0.01
TSPAN4-208ENST00000409531 SELENOWP63302 87 aa15.09■□□□□ 0.01
TSPAN4-208ENST00000409531 DMTNQ08495 405 aa15.09■□□□□ 0.01
TSPAN4-208ENST00000409531 CYBRD1Q53TN4 286 aa15.09■□□□□ 0.01
TSPAN4-208ENST00000409531 ZNF766Q5HY98 468 aa15.09■□□□□ 0.01
TSPAN4-208ENST00000409531 PRAMEF20Q5VT98 475 aa15.09■□□□□ 0.01
TSPAN4-208ENST00000409531 CYP2R1Q6VVX0 501 aa15.09■□□□□ 0.01
TSPAN4-208ENST00000409531 CBLL1Q75N03 491 aa15.09■□□□□ 0.01
TSPAN4-208ENST00000409531 MARCH3Q86UD3 253 aa15.09■□□□□ 0.01
TSPAN4-208ENST00000409531 PACS2Q86VP3 889 aa15.09■□□□□ 0.01
TSPAN4-208ENST00000409531 SPPL2CQ8IUH8 684 aa15.09■□□□□ 0.01
TSPAN4-208ENST00000409531 GRAMD2AQ8IUY3 354 aa15.09■□□□□ 0.01
TSPAN4-208ENST00000409531 PROX1Q92786 737 aa15.09■□□□□ 0.01
TSPAN4-208ENST00000409531 UTP4Q969X6 686 aaKnown RBP15.09■□□□□ 0.01
TSPAN4-208ENST00000409531 DTNBP1Q96EV8 351 aa15.09■□□□□ 0.01
TSPAN4-208ENST00000409531 BARD1Q99728 777 aaKnown RBP15.09■□□□□ 0.01
TSPAN4-208ENST00000409531 AGPAT4Q9NRZ5 378 aa15.09■□□□□ 0.01
TSPAN4-208ENST00000409531 OLAHQ9NV23 265 aa15.09■□□□□ 0.01
TSPAN4-208ENST00000409531 HEATR5AQ86XA9 2040 aa15.09■□□□□ 0.01
TSPAN4-208ENST00000409531 CENPVL1A0A0U1RR11 272 aa15.08■□□□□ 0
TSPAN4-208ENST00000409531 AQP12BA6NM10 295 aa15.08■□□□□ 0
TSPAN4-208ENST00000409531 NME2P1O60361 137 aa15.08■□□□□ 0
TSPAN4-208ENST00000409531 EIF4E2O60573 245 aaKnown RBP15.08■□□□□ 0
TSPAN4-208ENST00000409531 UBL4AP11441 157 aa15.08■□□□□ 0
TSPAN4-208ENST00000409531 ATP6V1B2P21281 511 aa15.08■□□□□ 0
TSPAN4-208ENST00000409531 NME2P22392 152 aa15.08■□□□□ 0
TSPAN4-208ENST00000409531 KCNJ5P48544 419 aa15.08■□□□□ 0
TSPAN4-208ENST00000409531 CRYBA2P53672 197 aa15.08■□□□□ 0
TSPAN4-208ENST00000409531 EEF1A1P68104 462 aaKnown RBP15.08■□□□□ 0
TSPAN4-208ENST00000409531 MRPL2Q5T653 305 aaKnown RBP15.08■□□□□ 0
TSPAN4-208ENST00000409531 FNDC7Q5VTL7 733 aa15.08■□□□□ 0
TSPAN4-208ENST00000409531 APOOLQ6UXV4 268 aa15.08■□□□□ 0
TSPAN4-208ENST00000409531 ZNF836Q6ZNA1 936 aa15.08■□□□□ 0
TSPAN4-208ENST00000409531 HMGN2P46Q86SG4 172 aa15.08■□□□□ 0
TSPAN4-208ENST00000409531 AQP12AQ8IXF9 295 aa15.08■□□□□ 0
TSPAN4-208ENST00000409531 ZNF440Q8IYI8 595 aa15.08■□□□□ 0
TSPAN4-208ENST00000409531 SMYD1Q8NB12 490 aa15.08■□□□□ 0
TSPAN4-208ENST00000409531 SLC35B4Q969S0 331 aa15.08■□□□□ 0
TSPAN4-208ENST00000409531 SCMH1Q96GD3 660 aa15.08■□□□□ 0
TSPAN4-208ENST00000409531 TMEM41AQ96HV5 264 aa15.08■□□□□ 0
TSPAN4-208ENST00000409531 TPD52L3Q96J77 140 aa15.08■□□□□ 0
TSPAN4-208ENST00000409531 FRMD6Q96NE9 622 aa15.08■□□□□ 0
TSPAN4-208ENST00000409531 FAM173AQ9BQD7 235 aa15.08■□□□□ 0
TSPAN4-208ENST00000409531 GALNT9Q9HCQ5 603 aa15.08■□□□□ 0
TSPAN4-208ENST00000409531 PPP4R1LQ9P1A2 415 aa15.08■□□□□ 0
TSPAN4-208ENST00000409531 NTNG1Q9Y2I2 539 aa15.08■□□□□ 0
TSPAN4-208ENST00000409531 CDHR4A6H8M9 788 aa15.07■□□□□ 0
TSPAN4-208ENST00000409531 ZNF264O43296 627 aa15.07■□□□□ 0
TSPAN4-208ENST00000409531 FESP07332 822 aa15.07■□□□□ 0
TSPAN4-208ENST00000409531 HOXB6P17509 224 aaKnown RBP15.07■□□□□ 0
TSPAN4-208ENST00000409531 CD247P20963 164 aa15.07■□□□□ 0
TSPAN4-208ENST00000409531 ELAVL4P26378 380 aaKnown RBP15.07■□□□□ 0
TSPAN4-208ENST00000409531 MSX1P28360 303 aa15.07■□□□□ 0
TSPAN4-208ENST00000409531 PTGDSP41222 190 aa15.07■□□□□ 0
TSPAN4-208ENST00000409531 MASP1P48740 699 aa15.07■□□□□ 0
TSPAN4-208ENST00000409531 GAS1P54826 345 aa15.07■□□□□ 0
TSPAN4-208ENST00000409531 DUSP7Q16829 419 aa15.07■□□□□ 0
TSPAN4-208ENST00000409531 BICRALQ6AI39 1079 aa15.07■□□□□ 0
TSPAN4-208ENST00000409531 FKBP9P1Q75LS8 142 aa15.07■□□□□ 0
TSPAN4-208ENST00000409531 GATSQ8NAP1 163 aa15.07■□□□□ 0
TSPAN4-208ENST00000409531 FAM98AQ8NCA5 519 aaKnown RBP15.07■□□□□ 0
TSPAN4-208ENST00000409531 ZNF597Q96LX8 424 aa15.07■□□□□ 0
TSPAN4-208ENST00000409531 EXOSC3Q9NQT5 275 aaKnown RBP15.07■□□□□ 0
TSPAN4-208ENST00000409531 KLHL1Q9NR64 748 aa15.07■□□□□ 0
TSPAN4-208ENST00000409531 BOKQ9UMX3 212 aaPredicted RBP15.07■□□□□ 0
TSPAN4-208ENST00000409531 SLC9A8Q9Y2E8 581 aa15.07■□□□□ 0
TSPAN4-208ENST00000409531 HCRTR2O43614 444 aa15.06■□□□□ 0
TSPAN4-208ENST00000409531 TPST1O60507 370 aa15.06■□□□□ 0
TSPAN4-208ENST00000409531 LGI1O95970 557 aa15.06■□□□□ 0
TSPAN4-208ENST00000409531 SUMO3P55854 103 aaPredicted RBP15.06■□□□□ 0
TSPAN4-208ENST00000409531 CD226Q15762 336 aa15.06■□□□□ 0
TSPAN4-208ENST00000409531 INAQ16352 499 aa15.06■□□□□ 0
TSPAN4-208ENST00000409531 ZNF550Q7Z398 422 aa15.06■□□□□ 0
TSPAN4-208ENST00000409531 GALNTL5Q7Z4T8 443 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms