RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 LRRN3Q9H3W5 708 aa14.41□□□□□ -0.1
LIMS2-205ENST00000409455 SIRT3Q9NTG7 399 aaPredicted RBP14.41□□□□□ -0.1
LIMS2-205ENST00000409455 MED17Q9NVC6 651 aa14.41□□□□□ -0.1
LIMS2-205ENST00000409455 OBP2AQ9NY56 170 aa14.41□□□□□ -0.1
LIMS2-205ENST00000409455 OR6C2Q9NZP2 312 aa14.41□□□□□ -0.1
LIMS2-205ENST00000409455 CLEC4AQ9UMR7 237 aa14.41□□□□□ -0.1
LIMS2-205ENST00000409455 H3BUI4 141 aa14.4□□□□□ -0.1
LIMS2-205ENST00000409455 NDUFA2O43678 99 aa14.4□□□□□ -0.1
LIMS2-205ENST00000409455 XPAP23025 273 aaPredicted RBP14.4□□□□□ -0.1
LIMS2-205ENST00000409455 PDHA2P29803 388 aa14.4□□□□□ -0.1
LIMS2-205ENST00000409455 VASPP50552 380 aaPredicted RBP14.4□□□□□ -0.1
LIMS2-205ENST00000409455 CTSCP53634 463 aa14.4□□□□□ -0.1
LIMS2-205ENST00000409455 DLX2Q07687 328 aaPredicted RBP14.4□□□□□ -0.1
LIMS2-205ENST00000409455 FZD5Q13467 585 aa14.4□□□□□ -0.1
LIMS2-205ENST00000409455 GRIN2CQ14957 1233 aa14.4□□□□□ -0.1
LIMS2-205ENST00000409455 TFAP2EQ6VUC0 442 aa14.4□□□□□ -0.1
LIMS2-205ENST00000409455 HMGN2P46Q86SG4 172 aa14.4□□□□□ -0.1
LIMS2-205ENST00000409455 CMIPQ8IY22 773 aa14.4□□□□□ -0.1
LIMS2-205ENST00000409455 SIRT6Q8N6T7 355 aa14.4□□□□□ -0.1
LIMS2-205ENST00000409455 ZNF740Q8NDX6 193 aa14.4□□□□□ -0.1
LIMS2-205ENST00000409455 SLC35G5Q96KT7 338 aa14.4□□□□□ -0.1
LIMS2-205ENST00000409455 MYADMQ96S97 322 aa14.4□□□□□ -0.1
LIMS2-205ENST00000409455 KCNK12Q9HB15 430 aa14.4□□□□□ -0.1
LIMS2-205ENST00000409455 MED9Q9NWA0 146 aa14.4□□□□□ -0.1
LIMS2-205ENST00000409455 C5AR2Q9P296 337 aa14.4□□□□□ -0.1
LIMS2-205ENST00000409455 RPS6KB2Q9UBS0 482 aa14.4□□□□□ -0.1
LIMS2-205ENST00000409455 PFDN2Q9UHV9 154 aa14.4□□□□□ -0.1
LIMS2-205ENST00000409455 PRAMEF27A3QJZ7 478 aa14.4□□□□□ -0.1
LIMS2-205ENST00000409455 ANTXRLA6NF34 631 aa14.4□□□□□ -0.1
LIMS2-205ENST00000409455 PCP4L1A6NKN8 68 aa14.4□□□□□ -0.1
LIMS2-205ENST00000409455 PGRMC2O15173 223 aa14.4□□□□□ -0.1
LIMS2-205ENST00000409455 C1orf105O95561 183 aa14.4□□□□□ -0.1
LIMS2-205ENST00000409455 HPXP02790 462 aa14.4□□□□□ -0.1
LIMS2-205ENST00000409455 TIMP2P16035 220 aa14.4□□□□□ -0.1
LIMS2-205ENST00000409455 SDHBP21912 280 aa14.4□□□□□ -0.1
LIMS2-205ENST00000409455 DRD5P21918 477 aa14.4□□□□□ -0.1
LIMS2-205ENST00000409455 PDGFRLQ15198 375 aa14.4□□□□□ -0.1
LIMS2-205ENST00000409455 FAM27D1Q5T7N8 215 aa14.4□□□□□ -0.1
LIMS2-205ENST00000409455 ACBD7Q8N6N7 88 aa14.4□□□□□ -0.1
LIMS2-205ENST00000409455 OR4Q3Q8NH05 313 aa14.4□□□□□ -0.1
LIMS2-205ENST00000409455 MOSPD2Q8NHP6 518 aa14.4□□□□□ -0.1
LIMS2-205ENST00000409455 BBS10Q8TAM1 723 aa14.4□□□□□ -0.1
LIMS2-205ENST00000409455 EXOSC8Q96B26 276 aaKnown RBP14.4□□□□□ -0.1
LIMS2-205ENST00000409455 CAMK1GQ96NX5 476 aa14.4□□□□□ -0.1
LIMS2-205ENST00000409455 ALG8Q9BVK2 526 aa14.4□□□□□ -0.1
LIMS2-205ENST00000409455 SGPP1Q9BX95 441 aa14.4□□□□□ -0.1
LIMS2-205ENST00000409455 LDAHQ9H6V9 325 aa14.4□□□□□ -0.1
LIMS2-205ENST00000409455 NKIRAS2Q9NYR9 191 aa14.4□□□□□ -0.1
LIMS2-205ENST00000409455 L7N2F9 121 aa14.39□□□□□ -0.11
LIMS2-205ENST00000409455 WDPCPO95876 746 aa14.39□□□□□ -0.11
LIMS2-205ENST00000409455 TFP02787 698 aa14.39□□□□□ -0.11
LIMS2-205ENST00000409455 ALDOBP05062 364 aa14.39□□□□□ -0.11
LIMS2-205ENST00000409455 ZNF805Q5CZA5 627 aa14.39□□□□□ -0.11
LIMS2-205ENST00000409455 COL13A1Q5TAT6 717 aaPredicted RBP14.39□□□□□ -0.11
LIMS2-205ENST00000409455 ARL9Q6T311 187 aa14.39□□□□□ -0.11
LIMS2-205ENST00000409455 GJD3Q8N144 294 aa14.39□□□□□ -0.11
LIMS2-205ENST00000409455 RASGEF1AQ8N9B8 481 aa14.39□□□□□ -0.11
LIMS2-205ENST00000409455 LMNTD1Q8N9Z9 388 aa14.39□□□□□ -0.11
LIMS2-205ENST00000409455 PIGXQ8TBF5 258 aa14.39□□□□□ -0.11
LIMS2-205ENST00000409455 PTP4A1Q93096 173 aa14.39□□□□□ -0.11
LIMS2-205ENST00000409455 ELMOD3Q96FG2 381 aa14.39□□□□□ -0.11
LIMS2-205ENST00000409455 CHIAQ9BZP6 476 aa14.39□□□□□ -0.11
LIMS2-205ENST00000409455 ZNF275Q9NSD4 429 aaPredicted RBP14.39□□□□□ -0.11
LIMS2-205ENST00000409455 NLGN3Q9NZ94 848 aa14.39□□□□□ -0.11
LIMS2-205ENST00000409455 CLEC1BQ9P126 229 aa14.39□□□□□ -0.11
LIMS2-205ENST00000409455 CHST2Q9Y4C5 530 aa14.39□□□□□ -0.11
LIMS2-205ENST00000409455 HRH3Q9Y5N1 445 aa14.39□□□□□ -0.11
LIMS2-205ENST00000409455 SIRT4Q9Y6E7 314 aaPredicted RBP14.39□□□□□ -0.11
LIMS2-205ENST00000409455 TRABD2BA6NFA1 517 aa14.39□□□□□ -0.11
LIMS2-205ENST00000409455 PLPP1O14494 284 aa14.39□□□□□ -0.11
LIMS2-205ENST00000409455 PRAF2O60831 178 aa14.39□□□□□ -0.11
LIMS2-205ENST00000409455 EPPINO95925 133 aa14.39□□□□□ -0.11
LIMS2-205ENST00000409455 PRLHRP49683 370 aa14.39□□□□□ -0.11
LIMS2-205ENST00000409455 PCBP4P57723 403 aaKnown RBP14.39□□□□□ -0.11
LIMS2-205ENST00000409455 RPS7P62081 194 aaKnown RBP14.39□□□□□ -0.11
LIMS2-205ENST00000409455 DYRK1AQ13627 763 aa14.39□□□□□ -0.11
LIMS2-205ENST00000409455 RUNX3Q13761 415 aa14.39□□□□□ -0.11
LIMS2-205ENST00000409455 TRAM2Q15035 370 aa14.39□□□□□ -0.11
LIMS2-205ENST00000409455 PGGHGQ32M88 737 aa14.39□□□□□ -0.11
LIMS2-205ENST00000409455 Q6ZVL8 140 aa14.39□□□□□ -0.11
LIMS2-205ENST00000409455 CXXC5Q7LFL8 322 aaKnown RBP14.39□□□□□ -0.11
LIMS2-205ENST00000409455 HSD11B1LQ7Z5J1 315 aa14.39□□□□□ -0.11
LIMS2-205ENST00000409455 SIPA1Q96FS4 1042 aa14.39□□□□□ -0.11
LIMS2-205ENST00000409455 KXD1Q9BQD3 176 aa14.39□□□□□ -0.11
LIMS2-205ENST00000409455 RPP25Q9BUL9 199 aaKnown RBP14.39□□□□□ -0.11
LIMS2-205ENST00000409455 SLC7A5P2Q9GIP4 190 aa14.39□□□□□ -0.11
LIMS2-205ENST00000409455 ZDHHC4Q9NPG8 344 aa14.39□□□□□ -0.11
LIMS2-205ENST00000409455 BRD7Q9NPI1 651 aa14.39□□□□□ -0.11
LIMS2-205ENST00000409455 IFT46Q9NQC8 304 aa14.39□□□□□ -0.11
LIMS2-205ENST00000409455 KIF26AQ9ULI4 1882 aaPredicted RBP14.38□□□□□ -0.11
LIMS2-205ENST00000409455 TBC1D3BA6NDS4 549 aa14.38□□□□□ -0.11
LIMS2-205ENST00000409455 SOCS6O14544 535 aa14.38□□□□□ -0.11
LIMS2-205ENST00000409455 TBX19O60806 448 aa14.38□□□□□ -0.11
LIMS2-205ENST00000409455 SNAPC5O75971 98 aa14.38□□□□□ -0.11
LIMS2-205ENST00000409455 RGS11O94810 467 aa14.38□□□□□ -0.11
LIMS2-205ENST00000409455 TGM6O95932 706 aa14.38□□□□□ -0.11
LIMS2-205ENST00000409455 ANKRD34CP0C6C1 535 aa14.38□□□□□ -0.11
LIMS2-205ENST00000409455 METAP1P53582 386 aa14.38□□□□□ -0.11
LIMS2-205ENST00000409455 TRAM1Q15629 374 aa14.38□□□□□ -0.11
LIMS2-205ENST00000409455 FNDC3BQ53EP0 1204 aaKnown RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms