RNA–Protein interactions for RNA: ENST00000405655.7

PRAME-205, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-205ENST00000405655 A0A1B0GWA3 101 aa12.96□□□□□ -0.33
PRAME-205ENST00000405655 IFI30P13284 250 aa12.96□□□□□ -0.33
PRAME-205ENST00000405655 CCNA2P20248 432 aa12.96□□□□□ -0.33
PRAME-205ENST00000405655 DRD5P21918 477 aa12.96□□□□□ -0.33
PRAME-205ENST00000405655 CLDN6P56747 220 aa12.96□□□□□ -0.33
PRAME-205ENST00000405655 ZNF91Q05481 1191 aa12.96□□□□□ -0.33
PRAME-205ENST00000405655 TSPAN31Q12999 210 aa12.96□□□□□ -0.33
PRAME-205ENST00000405655 NR1D2Q14995 579 aa12.96□□□□□ -0.33
PRAME-205ENST00000405655 NR0B2Q15466 257 aa12.96□□□□□ -0.33
PRAME-205ENST00000405655 DECR1Q16698 335 aa12.96□□□□□ -0.33
PRAME-205ENST00000405655 SYT14P1Q58G82 188 aa12.96□□□□□ -0.33
PRAME-205ENST00000405655 TRIM61Q5EBN2 209 aa12.96□□□□□ -0.33
PRAME-205ENST00000405655 SYT6Q5T7P8 510 aaPredicted RBP12.96□□□□□ -0.33
PRAME-205ENST00000405655 TMEM71Q6P5X7 295 aa12.96□□□□□ -0.33
PRAME-205ENST00000405655 ZCCHC12Q6PEW1 402 aa12.96□□□□□ -0.33
PRAME-205ENST00000405655 SMARCD3Q6STE5 483 aa12.96□□□□□ -0.33
PRAME-205ENST00000405655 CBLN3Q6UW01 205 aa12.96□□□□□ -0.33
PRAME-205ENST00000405655 KIRREL2Q6UWL6 708 aa12.96□□□□□ -0.33
PRAME-205ENST00000405655 THSD4Q6ZMP0 1018 aa12.96□□□□□ -0.33
PRAME-205ENST00000405655 LRRC17Q8N6Y2 441 aa12.96□□□□□ -0.33
PRAME-205ENST00000405655 ZNF721Q8TF20 911 aa12.96□□□□□ -0.33
PRAME-205ENST00000405655 FGF11Q92914 225 aa12.96□□□□□ -0.33
PRAME-205ENST00000405655 CCDC74BQ96LY2 380 aa12.96□□□□□ -0.33
PRAME-205ENST00000405655 ZNF768Q9H5H4 540 aaKnown RBP12.96□□□□□ -0.33
PRAME-205ENST00000405655 CACYBPQ9HB71 228 aaKnown RBP12.96□□□□□ -0.33
PRAME-205ENST00000405655 SERTAD3Q9UJW9 196 aa12.96□□□□□ -0.33
PRAME-205ENST00000405655 ZNF223Q9UK11 482 aaPredicted RBP12.96□□□□□ -0.33
PRAME-205ENST00000405655 CNTRLQ7Z7A1 2325 aa12.96□□□□□ -0.34
PRAME-205ENST00000405655 IGKV3D-11A0A0A0MRZ8 115 aa12.96□□□□□ -0.34
PRAME-205ENST00000405655 TRAPPC13A5PLN9 417 aa12.96□□□□□ -0.34
PRAME-205ENST00000405655 WWP2O00308 870 aa12.96□□□□□ -0.34
PRAME-205ENST00000405655 KLF4O43474 513 aa12.96□□□□□ -0.34
PRAME-205ENST00000405655 OR5F1O95221 314 aa12.96□□□□□ -0.34
PRAME-205ENST00000405655 CD36P16671 472 aa12.96□□□□□ -0.34
PRAME-205ENST00000405655 PCYT1AP49585 367 aa12.96□□□□□ -0.34
PRAME-205ENST00000405655 RANBP3LQ86VV4 465 aaPredicted RBP12.96□□□□□ -0.34
PRAME-205ENST00000405655 OR51A7Q8NH64 312 aa12.96□□□□□ -0.34
PRAME-205ENST00000405655 SMAP2Q8WU79 429 aaPredicted RBP12.96□□□□□ -0.34
PRAME-205ENST00000405655 IPCEF1Q8WWN9 437 aaPredicted RBP12.96□□□□□ -0.34
PRAME-205ENST00000405655 ZNF582Q96NG8 517 aaPredicted RBP12.96□□□□□ -0.34
PRAME-205ENST00000405655 ADOQ96SZ5 270 aa12.96□□□□□ -0.34
PRAME-205ENST00000405655 CLCA3PQ9Y6N3 262 aa12.96□□□□□ -0.34
PRAME-205ENST00000405655 PNMA8CA0A1B0GUJ8 204 aa12.95□□□□□ -0.34
PRAME-205ENST00000405655 NPIPB9F8W1W9 429 aa12.95□□□□□ -0.34
PRAME-205ENST00000405655 DSCR3O14972 297 aa12.95□□□□□ -0.34
PRAME-205ENST00000405655 CNOT3O75175 753 aaKnown RBP12.95□□□□□ -0.34
PRAME-205ENST00000405655 GADD45AP24522 165 aa12.95□□□□□ -0.34
PRAME-205ENST00000405655 SLC15A1P46059 708 aa12.95□□□□□ -0.34
PRAME-205ENST00000405655 ENTPD1P49961 510 aa12.95□□□□□ -0.34
PRAME-205ENST00000405655 TMBIM6P55061 237 aa12.95□□□□□ -0.34
PRAME-205ENST00000405655 RPS3AP61247 264 aaKnown RBP12.95□□□□□ -0.34
PRAME-205ENST00000405655 SKP1P63208 163 aa12.95□□□□□ -0.34
PRAME-205ENST00000405655 DSG2Q14126 1118 aa12.95□□□□□ -0.34
PRAME-205ENST00000405655 MED22Q15528 200 aa12.95□□□□□ -0.34
PRAME-205ENST00000405655 TIGD6Q17RP2 521 aa12.95□□□□□ -0.34
PRAME-205ENST00000405655 PHF19Q5T6S3 580 aa12.95□□□□□ -0.34
PRAME-205ENST00000405655 CD300LDQ6UXZ3 194 aa12.95□□□□□ -0.34
PRAME-205ENST00000405655 PRSS42Q7Z5A4 293 aa12.95□□□□□ -0.34
PRAME-205ENST00000405655 C9orf40Q8IXQ3 194 aa12.95□□□□□ -0.34
PRAME-205ENST00000405655 WDR36Q8NI36 951 aaKnown RBP12.95□□□□□ -0.34
PRAME-205ENST00000405655 ZNF420Q8TAQ5 688 aaPredicted RBP12.95□□□□□ -0.34
PRAME-205ENST00000405655 TEX47Q8TBZ9 253 aa12.95□□□□□ -0.34
PRAME-205ENST00000405655 TMEM239Q8WW34 195 aa12.95□□□□□ -0.34
PRAME-205ENST00000405655 SH3YL1Q96HL8 342 aaPredicted RBP12.95□□□□□ -0.34
PRAME-205ENST00000405655 OR51E2Q9H255 320 aa12.95□□□□□ -0.34
PRAME-205ENST00000405655 Q9N2J8 555 aa12.95□□□□□ -0.34
PRAME-205ENST00000405655 TBC1D23Q9NUY8 699 aa12.95□□□□□ -0.34
PRAME-205ENST00000405655 SEMA5BQ9P283 1151 aa12.95□□□□□ -0.34
PRAME-205ENST00000405655 EML6Q6ZMW3 1958 aa12.95□□□□□ -0.34
PRAME-205ENST00000405655 TEX51A0A1B0GUA7 166 aa12.94□□□□□ -0.34
PRAME-205ENST00000405655 A0A1B0GX78 115 aa12.94□□□□□ -0.34
PRAME-205ENST00000405655 DBTP11182 482 aaKnown RBP12.94□□□□□ -0.34
PRAME-205ENST00000405655 EFNB1P98172 346 aa12.94□□□□□ -0.34
PRAME-205ENST00000405655 ROR2Q01974 943 aaKnown RBP12.94□□□□□ -0.34
PRAME-205ENST00000405655 TUBA3CQ13748 450 aa12.94□□□□□ -0.34
PRAME-205ENST00000405655 IRF3Q14653 427 aa12.94□□□□□ -0.34
PRAME-205ENST00000405655 EIPR1Q53HC9 387 aa12.94□□□□□ -0.34
PRAME-205ENST00000405655 CCDC157Q569K6 752 aa12.94□□□□□ -0.34
PRAME-205ENST00000405655 FAM199XQ6PEV8 388 aaPredicted RBP12.94□□□□□ -0.34
PRAME-205ENST00000405655 IGFN1Q86VF2 1251 aa12.94□□□□□ -0.34
PRAME-205ENST00000405655 GHDCQ8N2G8 530 aa12.94□□□□□ -0.34
PRAME-205ENST00000405655 IFI44Q8TCB0 444 aa12.94□□□□□ -0.34
PRAME-205ENST00000405655 MYDGFQ969H8 173 aa12.94□□□□□ -0.34
PRAME-205ENST00000405655 HCAR1Q9BXC0 346 aa12.94□□□□□ -0.34
PRAME-205ENST00000405655 SLC7A5P2Q9GIP4 190 aa12.94□□□□□ -0.34
PRAME-205ENST00000405655 CHRNA10Q9GZZ6 450 aa12.94□□□□□ -0.34
PRAME-205ENST00000405655 TRIM45Q9H8W5 580 aaPredicted RBP12.94□□□□□ -0.34
PRAME-205ENST00000405655 C4orf47A7E2U8 309 aa12.94□□□□□ -0.34
PRAME-205ENST00000405655 SOCS6O14544 535 aa12.94□□□□□ -0.34
PRAME-205ENST00000405655 ZNF354AO60765 605 aaPredicted RBP12.94□□□□□ -0.34
PRAME-205ENST00000405655 HOXA6P31267 233 aa12.94□□□□□ -0.34
PRAME-205ENST00000405655 SOX3P41225 446 aa12.94□□□□□ -0.34
PRAME-205ENST00000405655 NR0B1P51843 470 aaKnown RBP12.94□□□□□ -0.34
PRAME-205ENST00000405655 SNRPGP62308 76 aaKnown RBP12.94□□□□□ -0.34
PRAME-205ENST00000405655 ANKDD1AQ495B1 522 aa12.94□□□□□ -0.34
PRAME-205ENST00000405655 ZNF620Q6ZNG0 422 aa12.94□□□□□ -0.34
PRAME-205ENST00000405655 ANKRD13BQ86YJ7 626 aa12.94□□□□□ -0.34
PRAME-205ENST00000405655 OR5M3Q8NGP4 307 aa12.94□□□□□ -0.34
PRAME-205ENST00000405655 C8orf44Q96CB5 159 aa12.94□□□□□ -0.34
PRAME-205ENST00000405655 ZBTB20Q9HC78 741 aaPredicted RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms