RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 PLCXD2Q0VAA5 305 aa19.33■□□□□ 0.69
TPM1-208ENST00000404484 KCNAB2Q13303 367 aa19.33■□□□□ 0.69
TPM1-208ENST00000404484 ENTPD8Q5MY95 495 aa19.33■□□□□ 0.69
TPM1-208ENST00000404484 ZNF550Q7Z398 422 aa19.33■□□□□ 0.69
TPM1-208ENST00000404484 ZNF440Q8IYI8 595 aa19.33■□□□□ 0.69
TPM1-208ENST00000404484 SLC38A4Q969I6 547 aa19.33■□□□□ 0.69
TPM1-208ENST00000404484 EFHD2Q96C19 240 aaPredicted RBP19.33■□□□□ 0.69
TPM1-208ENST00000404484 ZNF559Q9BR84 538 aa19.33■□□□□ 0.69
TPM1-208ENST00000404484 FAM117AQ9C073 453 aa19.33■□□□□ 0.69
TPM1-208ENST00000404484 PAPOLBQ9NRJ5 636 aaKnown RBP19.33■□□□□ 0.69
TPM1-208ENST00000404484 FAM118AQ9NWS6 357 aa19.33■□□□□ 0.69
TPM1-208ENST00000404484 MGAT4BQ9UQ53 548 aa19.33■□□□□ 0.69
TPM1-208ENST00000404484 TEX51A0A1B0GUA7 166 aa19.32■□□□□ 0.68
TPM1-208ENST00000404484 SERINC4A6NH21 518 aa19.32■□□□□ 0.68
TPM1-208ENST00000404484 STMND1H3BQB6 276 aa19.32■□□□□ 0.68
TPM1-208ENST00000404484 SCDO00767 359 aa19.32■□□□□ 0.68
TPM1-208ENST00000404484 SLC16A6O15403 523 aa19.32■□□□□ 0.68
TPM1-208ENST00000404484 UGT2B11O75310 529 aa19.32■□□□□ 0.68
TPM1-208ENST00000404484 CYP7B1O75881 506 aa19.32■□□□□ 0.68
TPM1-208ENST00000404484 ADAP00813 363 aa19.32■□□□□ 0.68
TPM1-208ENST00000404484 IFNGR2P38484 337 aa19.32■□□□□ 0.68
TPM1-208ENST00000404484 ZNF136P52737 540 aa19.32■□□□□ 0.68
TPM1-208ENST00000404484 IL1RL1Q01638 556 aa19.32■□□□□ 0.68
TPM1-208ENST00000404484 IL18R1Q13478 541 aa19.32■□□□□ 0.68
TPM1-208ENST00000404484 USP51Q70EK9 711 aa19.32■□□□□ 0.68
TPM1-208ENST00000404484 ESX1Q8N693 406 aa19.32■□□□□ 0.68
TPM1-208ENST00000404484 FUZQ9BT04 418 aa19.32■□□□□ 0.68
TPM1-208ENST00000404484 PNPLA3Q9NST1 481 aa19.32■□□□□ 0.68
TPM1-208ENST00000404484 WDR70Q9NW82 654 aa19.32■□□□□ 0.68
TPM1-208ENST00000404484 TRBV11-1A0A0K0K1C0 115 aa19.32■□□□□ 0.68
TPM1-208ENST00000404484 SH3PXD2BA1X283 911 aa19.32■□□□□ 0.68
TPM1-208ENST00000404484 CPSF4LA6NMK7 179 aaKnown RBP19.32■□□□□ 0.68
TPM1-208ENST00000404484 H3BNH8 94 aa19.32■□□□□ 0.68
TPM1-208ENST00000404484 REM1O75628 298 aa19.32■□□□□ 0.68
TPM1-208ENST00000404484 UMODP07911 640 aa19.32■□□□□ 0.68
TPM1-208ENST00000404484 ENDOUP21128 410 aaKnown RBP19.32■□□□□ 0.68
TPM1-208ENST00000404484 TBXA2RP21731 343 aa19.32■□□□□ 0.68
TPM1-208ENST00000404484 CBLP22681 906 aa19.32■□□□□ 0.68
TPM1-208ENST00000404484 ADH7P40394 386 aa19.32■□□□□ 0.68
TPM1-208ENST00000404484 KLHL26Q53HC5 615 aa19.32■□□□□ 0.68
TPM1-208ENST00000404484 ANKRD34AQ69YU3 496 aa19.32■□□□□ 0.68
TPM1-208ENST00000404484 UGT2A3Q6UWM9 527 aa19.32■□□□□ 0.68
TPM1-208ENST00000404484 GALNT5Q7Z7M9 940 aa19.32■□□□□ 0.68
TPM1-208ENST00000404484 AQP11Q8NBQ7 271 aa19.32■□□□□ 0.68
TPM1-208ENST00000404484 OR9Q2Q8NGE9 314 aa19.32■□□□□ 0.68
TPM1-208ENST00000404484 SLC7A13Q8TCU3 470 aa19.32■□□□□ 0.68
TPM1-208ENST00000404484 ADAMTS16Q8TE57 1224 aa19.32■□□□□ 0.68
TPM1-208ENST00000404484 GABARAPL3Q9BY60 117 aa19.32■□□□□ 0.68
TPM1-208ENST00000404484 ZNF700Q9H0M5 742 aa19.32■□□□□ 0.68
TPM1-208ENST00000404484 RIBC2Q9H4K1 309 aa19.32■□□□□ 0.68
TPM1-208ENST00000404484 LOC100130705A0A1B0GUX0 176 aa19.31■□□□□ 0.68
TPM1-208ENST00000404484 TRAPPC13A5PLN9 417 aa19.31■□□□□ 0.68
TPM1-208ENST00000404484 EFSO43281 561 aa19.31■□□□□ 0.68
TPM1-208ENST00000404484 OR10H3O60404 316 aa19.31■□□□□ 0.68
TPM1-208ENST00000404484 TSPAN2O60636 221 aa19.31■□□□□ 0.68
TPM1-208ENST00000404484 TPST2O60704 377 aa19.31■□□□□ 0.68
TPM1-208ENST00000404484 ABCB7O75027 752 aa19.31■□□□□ 0.68
TPM1-208ENST00000404484 ZFAND5O76080 213 aa19.31■□□□□ 0.68
TPM1-208ENST00000404484 UTS2O95399 124 aa19.31■□□□□ 0.68
TPM1-208ENST00000404484 NGFRP08138 427 aa19.31■□□□□ 0.68
TPM1-208ENST00000404484 ABCD3P28288 659 aa19.31■□□□□ 0.68
TPM1-208ENST00000404484 PNLIPRP2P54317 469 aa19.31■□□□□ 0.68
TPM1-208ENST00000404484 UGT2B15P54855 530 aa19.31■□□□□ 0.68
TPM1-208ENST00000404484 TPD52P55327 224 aaPredicted RBP19.31■□□□□ 0.68
TPM1-208ENST00000404484 SRSF6Q13247 344 aaKnown RBP19.31■□□□□ 0.68
TPM1-208ENST00000404484 EXT1Q16394 746 aa19.31■□□□□ 0.68
TPM1-208ENST00000404484 ZNF770Q6IQ21 691 aaPredicted RBP19.31■□□□□ 0.68
TPM1-208ENST00000404484 PARP8Q8N3A8 854 aa19.31■□□□□ 0.68
TPM1-208ENST00000404484 OR4C3Q8NH37 302 aa19.31■□□□□ 0.68
TPM1-208ENST00000404484 CNOT9Q92600 299 aaKnown RBP19.31■□□□□ 0.68
TPM1-208ENST00000404484 NKD1Q969G9 470 aa19.31■□□□□ 0.68
TPM1-208ENST00000404484 C8orf44Q96CB5 159 aa19.31■□□□□ 0.68
TPM1-208ENST00000404484 OMA1Q96E52 524 aa19.31■□□□□ 0.68
TPM1-208ENST00000404484 SLC41A3Q96GZ6 507 aa19.31■□□□□ 0.68
TPM1-208ENST00000404484 LMF1Q96S06 567 aa19.31■□□□□ 0.68
TPM1-208ENST00000404484 TMEM27Q9HBJ8 222 aa19.31■□□□□ 0.68
TPM1-208ENST00000404484 MAN2C1Q9NTJ4 1040 aa19.31■□□□□ 0.68
TPM1-208ENST00000404484 DNAJB12Q9NXW2 375 aaKnown RBP19.31■□□□□ 0.68
TPM1-208ENST00000404484 UBAP1Q9NZ09 502 aa19.31■□□□□ 0.68
TPM1-208ENST00000404484 ZNF223Q9UK11 482 aaPredicted RBP19.31■□□□□ 0.68
TPM1-208ENST00000404484 MITFO75030 526 aaPredicted RBP19.3■□□□□ 0.68
TPM1-208ENST00000404484 TNFAIP8O95379 198 aa19.3■□□□□ 0.68
TPM1-208ENST00000404484 CSTAP01040 98 aa19.3■□□□□ 0.68
TPM1-208ENST00000404484 LYNP07948 512 aa19.3■□□□□ 0.68
TPM1-208ENST00000404484 GNAO1P09471 354 aa19.3■□□□□ 0.68
TPM1-208ENST00000404484 UBTFL6P0CB48 400 aaPredicted RBP19.3■□□□□ 0.68
TPM1-208ENST00000404484 MMP11P24347 488 aa19.3■□□□□ 0.68
TPM1-208ENST00000404484 KEAP1Q14145 624 aa19.3■□□□□ 0.68
TPM1-208ENST00000404484 PCOLCEQ15113 449 aa19.3■□□□□ 0.68
TPM1-208ENST00000404484 BROXQ5VW32 411 aa19.3■□□□□ 0.68
TPM1-208ENST00000404484 PODNL1Q6PEZ8 512 aa19.3■□□□□ 0.68
TPM1-208ENST00000404484 ZNF613Q6PF04 617 aa19.3■□□□□ 0.68
TPM1-208ENST00000404484 TIPARPQ7Z3E1 657 aaKnown RBP19.3■□□□□ 0.68
TPM1-208ENST00000404484 C8orf59Q8N0T1 100 aaPredicted RBP19.3■□□□□ 0.68
TPM1-208ENST00000404484 SETD9Q8NE22 299 aa19.3■□□□□ 0.68
TPM1-208ENST00000404484 CCNL2Q96S94 520 aaPredicted RBP19.3■□□□□ 0.68
TPM1-208ENST00000404484 ADOQ96SZ5 270 aa19.3■□□□□ 0.68
TPM1-208ENST00000404484 DGCR6LQ9BY27 220 aa19.3■□□□□ 0.68
TPM1-208ENST00000404484 TRIM2Q9C040 744 aa19.3■□□□□ 0.68
TPM1-208ENST00000404484 CPNE5Q9HCH3 593 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms