RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 RNF122Q9H9V4 155 aa11.97□□□□□ -0.49
SDF4-203ENST00000403997 MEAF6Q9HAF1 191 aa11.97□□□□□ -0.49
SDF4-203ENST00000403997 THAP1Q9NVV9 213 aa11.97□□□□□ -0.49
SDF4-203ENST00000403997 CARD8Q9Y2G2 431 aa11.97□□□□□ -0.49
SDF4-203ENST00000403997 OTOGQ6ZRI0 2925 aa11.97□□□□□ -0.49
SDF4-203ENST00000403997 PRSS51A0A1B0GVH4 220 aa11.96□□□□□ -0.49
SDF4-203ENST00000403997 C7orf72A4D263 438 aa11.96□□□□□ -0.49
SDF4-203ENST00000403997 CASKO14936 926 aa11.96□□□□□ -0.49
SDF4-203ENST00000403997 AQP8O94778 261 aa11.96□□□□□ -0.49
SDF4-203ENST00000403997 ME2P23368 584 aa11.96□□□□□ -0.49
SDF4-203ENST00000403997 SLC6A8P48029 635 aa11.96□□□□□ -0.49
SDF4-203ENST00000403997 CLNS1AP54105 237 aaKnown RBP11.96□□□□□ -0.49
SDF4-203ENST00000403997 CASP9P55211 416 aa11.96□□□□□ -0.49
SDF4-203ENST00000403997 NME5P56597 212 aa11.96□□□□□ -0.49
SDF4-203ENST00000403997 MAGOHP61326 146 aaKnown RBP11.96□□□□□ -0.49
SDF4-203ENST00000403997 PHC1P78364 1004 aa11.96□□□□□ -0.49
SDF4-203ENST00000403997 OCRLQ01968 901 aa11.96□□□□□ -0.49
SDF4-203ENST00000403997 ZNF117Q03924 483 aa11.96□□□□□ -0.49
SDF4-203ENST00000403997 FAM27E3Q08E93 113 aa11.96□□□□□ -0.49
SDF4-203ENST00000403997 CDC20BQ86Y33 519 aa11.96□□□□□ -0.49
SDF4-203ENST00000403997 LRRC34Q8IZ02 419 aa11.96□□□□□ -0.49
SDF4-203ENST00000403997 OR10D3Q8NH80 312 aa11.96□□□□□ -0.49
SDF4-203ENST00000403997 POC1BQ8TC44 478 aa11.96□□□□□ -0.49
SDF4-203ENST00000403997 TESCQ96BS2 214 aa11.96□□□□□ -0.49
SDF4-203ENST00000403997 SLC35G5Q96KT7 338 aa11.96□□□□□ -0.49
SDF4-203ENST00000403997 DACH2Q96NX9 599 aa11.96□□□□□ -0.49
SDF4-203ENST00000403997 OPN3Q9H1Y3 402 aaPredicted RBP11.96□□□□□ -0.49
SDF4-203ENST00000403997 TMEM185BQ9H7F4 350 aa11.96□□□□□ -0.49
SDF4-203ENST00000403997 PAQR5Q9NXK6 330 aaPredicted RBP11.96□□□□□ -0.49
SDF4-203ENST00000403997 NKIRAS1Q9NYS0 192 aa11.96□□□□□ -0.49
SDF4-203ENST00000403997 NDRG3Q9UGV2 375 aa11.96□□□□□ -0.49
SDF4-203ENST00000403997 DTNAQ9Y4J8 743 aa11.96□□□□□ -0.49
SDF4-203ENST00000403997 ABCA4P78363 2273 aa11.96□□□□□ -0.49
SDF4-203ENST00000403997 UQCRHLA0A096LP55 91 aa11.95□□□□□ -0.5
SDF4-203ENST00000403997 SH3D21A4FU49 640 aa11.95□□□□□ -0.5
SDF4-203ENST00000403997 NPIPB9F8W1W9 429 aa11.95□□□□□ -0.5
SDF4-203ENST00000403997 SDHDO14521 159 aa11.95□□□□□ -0.5
SDF4-203ENST00000403997 TNFSF11O14788 317 aa11.95□□□□□ -0.5
SDF4-203ENST00000403997 ANKRD28O15084 1053 aa11.95□□□□□ -0.5
SDF4-203ENST00000403997 ADAMDEC1O15204 470 aa11.95□□□□□ -0.5
SDF4-203ENST00000403997 OIP5O43482 229 aa11.95□□□□□ -0.5
SDF4-203ENST00000403997 CXCL13O43927 109 aa11.95□□□□□ -0.5
SDF4-203ENST00000403997 SCN2BO60939 215 aa11.95□□□□□ -0.5
SDF4-203ENST00000403997 STX11O75558 287 aa11.95□□□□□ -0.5
SDF4-203ENST00000403997 SYNGR4O95473 234 aa11.95□□□□□ -0.5
SDF4-203ENST00000403997 AK1P00568 194 aa11.95□□□□□ -0.5
SDF4-203ENST00000403997 PLGP00747 810 aaPredicted RBP11.95□□□□□ -0.5
SDF4-203ENST00000403997 LINGO3P0C6S8 592 aa11.95□□□□□ -0.5
SDF4-203ENST00000403997 KITP10721 976 aa11.95□□□□□ -0.5
SDF4-203ENST00000403997 FCGR2AP12318 317 aa11.95□□□□□ -0.5
SDF4-203ENST00000403997 UQCRC2P22695 453 aa11.95□□□□□ -0.5
SDF4-203ENST00000403997 PSMA4P25789 261 aaKnown RBP11.95□□□□□ -0.5
SDF4-203ENST00000403997 S100A3P33764 101 aa11.95□□□□□ -0.5
SDF4-203ENST00000403997 EIF1P41567 113 aaKnown RBP11.95□□□□□ -0.5
SDF4-203ENST00000403997 P2RX1P51575 399 aa11.95□□□□□ -0.5
SDF4-203ENST00000403997 IST1P53990 364 aa11.95□□□□□ -0.5
SDF4-203ENST00000403997 FGFBP1Q14512 234 aa11.95□□□□□ -0.5
SDF4-203ENST00000403997 TESK1Q15569 626 aa11.95□□□□□ -0.5
SDF4-203ENST00000403997 GPR68Q15743 365 aa11.95□□□□□ -0.5
SDF4-203ENST00000403997 NDUFAF6Q330K2 333 aa11.95□□□□□ -0.5
SDF4-203ENST00000403997 SPANXN4Q5MJ08 99 aa11.95□□□□□ -0.5
SDF4-203ENST00000403997 BEND6Q5SZJ8 279 aaPredicted RBP11.95□□□□□ -0.5
SDF4-203ENST00000403997 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.95□□□□□ -0.5
SDF4-203ENST00000403997 PDSS1Q5T2R2 415 aa11.95□□□□□ -0.5
SDF4-203ENST00000403997 ATG16L1Q676U5 607 aa11.95□□□□□ -0.5
SDF4-203ENST00000403997 HBMQ6B0K9 141 aa11.95□□□□□ -0.5
SDF4-203ENST00000403997 OGFOD2Q6N063 350 aa11.95□□□□□ -0.5
SDF4-203ENST00000403997 CBLN3Q6UW01 205 aa11.95□□□□□ -0.5
SDF4-203ENST00000403997 ESPNLQ6ZVH7 1005 aa11.95□□□□□ -0.5
SDF4-203ENST00000403997 C16orf62Q7Z3J2 963 aa11.95□□□□□ -0.5
SDF4-203ENST00000403997 SPATA19Q7Z5L4 167 aa11.95□□□□□ -0.5
SDF4-203ENST00000403997 LILRA2Q8N149 483 aa11.95□□□□□ -0.5
SDF4-203ENST00000403997 OR2V1Q8NHB1 315 aa11.95□□□□□ -0.5
SDF4-203ENST00000403997 RFWD2Q8NHY2 731 aa11.95□□□□□ -0.5
SDF4-203ENST00000403997 XAGE5Q8WWM1 108 aa11.95□□□□□ -0.5
SDF4-203ENST00000403997 SLC39A3Q9BRY0 314 aa11.95□□□□□ -0.5
SDF4-203ENST00000403997 OR51I1Q9H343 314 aa11.95□□□□□ -0.5
SDF4-203ENST00000403997 LIME1Q9H400 295 aa11.95□□□□□ -0.5
SDF4-203ENST00000403997 SERHL2Q9H4I8 314 aa11.95□□□□□ -0.5
SDF4-203ENST00000403997 TMBIM4Q9HC24 238 aa11.95□□□□□ -0.5
SDF4-203ENST00000403997 EXD2Q9NVH0 621 aa11.95□□□□□ -0.5
SDF4-203ENST00000403997 MARCOQ9UEW3 520 aaPredicted RBP11.95□□□□□ -0.5
SDF4-203ENST00000403997 MCTS1Q9ULC4 181 aaKnown RBP11.95□□□□□ -0.5
SDF4-203ENST00000403997 EDARQ9UNE0 448 aa11.95□□□□□ -0.5
SDF4-203ENST00000403997 AKAP9Q99996 3911 aa11.95□□□□□ -0.5
SDF4-203ENST00000403997 SETD2Q9BYW2 2564 aaPredicted RBP11.94□□□□□ -0.5
SDF4-203ENST00000403997 A0A0J9YW62 118 aa11.94□□□□□ -0.5
SDF4-203ENST00000403997 GOLGA8QA0A0J9YX86 632 aa11.94□□□□□ -0.5
SDF4-203ENST00000403997 GOLGA8OA6NCC3 632 aa11.94□□□□□ -0.5
SDF4-203ENST00000403997 TRPC5OSA6NMA1 111 aa11.94□□□□□ -0.5
SDF4-203ENST00000403997 E9PBE3 544 aa11.94□□□□□ -0.5
SDF4-203ENST00000403997 GOLGA8NF8WBI6 632 aa11.94□□□□□ -0.5
SDF4-203ENST00000403997 ZNF195O14628 629 aa11.94□□□□□ -0.5
SDF4-203ENST00000403997 HDAC3O15379 428 aa11.94□□□□□ -0.5
SDF4-203ENST00000403997 FCMRO60667 390 aa11.94□□□□□ -0.5
SDF4-203ENST00000403997 CYP7B1O75881 506 aa11.94□□□□□ -0.5
SDF4-203ENST00000403997 OR12D1P0DN82 309 aa11.94□□□□□ -0.5
SDF4-203ENST00000403997 IL11P20809 199 aa11.94□□□□□ -0.5
SDF4-203ENST00000403997 SFTPDP35247 375 aa11.94□□□□□ -0.5
SDF4-203ENST00000403997 CHI3L1P36222 383 aaPredicted RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms