RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 PYROXD2Q8N2H3 581 aa4.14□□□□□ -1.75
HMGB3P19-201ENST00000403971 C10orf53Q8N6V4 93 aa4.14□□□□□ -1.75
HMGB3P19-201ENST00000403971 PQLC3Q8N755 202 aa4.14□□□□□ -1.75
HMGB3P19-201ENST00000403971 RTL3Q8N8U3 475 aaKnown RBP4.14□□□□□ -1.75
HMGB3P19-201ENST00000403971 PRELID2Q8N945 189 aa4.14□□□□□ -1.75
HMGB3P19-201ENST00000403971 CCDC26Q8TAB7 109 aa4.14□□□□□ -1.75
HMGB3P19-201ENST00000403971 ITFG1Q8TB96 612 aa4.14□□□□□ -1.75
HMGB3P19-201ENST00000403971 ACTL9Q8TC94 416 aa4.14□□□□□ -1.75
HMGB3P19-201ENST00000403971 P3H4Q92791 437 aa4.14□□□□□ -1.75
HMGB3P19-201ENST00000403971 FGF13Q92913 245 aa4.14□□□□□ -1.75
HMGB3P19-201ENST00000403971 SMARCD2Q92925 531 aa4.14□□□□□ -1.75
HMGB3P19-201ENST00000403971 MAGOHBQ96A72 148 aaKnown RBP4.14□□□□□ -1.75
HMGB3P19-201ENST00000403971 HAUS1Q96CS2 278 aa4.14□□□□□ -1.75
HMGB3P19-201ENST00000403971 MS4A14Q96JA4 679 aa4.14□□□□□ -1.75
HMGB3P19-201ENST00000403971 CAPZA3Q96KX2 299 aa4.14□□□□□ -1.75
HMGB3P19-201ENST00000403971 LURAP1Q96LR2 239 aa4.14□□□□□ -1.75
HMGB3P19-201ENST00000403971 OLFM3Q96PB7 478 aa4.14□□□□□ -1.75
HMGB3P19-201ENST00000403971 TSGA13Q96PP4 275 aa4.14□□□□□ -1.75
HMGB3P19-201ENST00000403971 PAPOLGQ9BWT3 736 aaKnown RBP4.14□□□□□ -1.75
HMGB3P19-201ENST00000403971 CARD6Q9BX69 1037 aa4.14□□□□□ -1.75
HMGB3P19-201ENST00000403971 WWTR1Q9GZV5 400 aa4.14□□□□□ -1.75
HMGB3P19-201ENST00000403971 FNDC4Q9H6D8 234 aaPredicted RBP4.14□□□□□ -1.75
HMGB3P19-201ENST00000403971 TEX10Q9NXF1 929 aaPredicted RBP4.14□□□□□ -1.75
HMGB3P19-201ENST00000403971 PCYOX1Q9UHG3 505 aa4.14□□□□□ -1.75
HMGB3P19-201ENST00000403971 PSORS1C1Q9UIG5 152 aa4.14□□□□□ -1.75
HMGB3P19-201ENST00000403971 VANGL2Q9ULK5 521 aa4.14□□□□□ -1.75
HMGB3P19-201ENST00000403971 NEU3Q9UQ49 428 aa4.14□□□□□ -1.75
HMGB3P19-201ENST00000403971 WIPI2Q9Y4P8 454 aa4.14□□□□□ -1.75
HMGB3P19-201ENST00000403971 COL4A2P08572 1712 aa4.14□□□□□ -1.75
HMGB3P19-201ENST00000403971 C2orf92A0A1B0GVN3 265 aa4.13□□□□□ -1.75
HMGB3P19-201ENST00000403971 NDUFAF8A1L188 74 aa4.13□□□□□ -1.75
HMGB3P19-201ENST00000403971 BCLAF3A2AJT9 711 aaKnown RBP4.13□□□□□ -1.75
HMGB3P19-201ENST00000403971 ARHGAP42A6NI28 874 aa4.13□□□□□ -1.75
HMGB3P19-201ENST00000403971 NKX6-3A6NJ46 265 aa4.13□□□□□ -1.75
HMGB3P19-201ENST00000403971 ANHXE9PGG2 379 aa4.13□□□□□ -1.75
HMGB3P19-201ENST00000403971 K7EQD1 137 aa4.13□□□□□ -1.75
HMGB3P19-201ENST00000403971 NDC80O14777 642 aa4.13□□□□□ -1.75
HMGB3P19-201ENST00000403971 B4GAT1O43505 415 aa4.13□□□□□ -1.75
HMGB3P19-201ENST00000403971 ECI2O75521 394 aa4.13□□□□□ -1.75
HMGB3P19-201ENST00000403971 PRAMEF12O95522 483 aa4.13□□□□□ -1.75
HMGB3P19-201ENST00000403971 GAS8O95995 478 aa4.13□□□□□ -1.75
HMGB3P19-201ENST00000403971 CCNCP24863 283 aa4.13□□□□□ -1.75
HMGB3P19-201ENST00000403971 GIFP27352 417 aa4.13□□□□□ -1.75
HMGB3P19-201ENST00000403971 COILP38432 576 aaPredicted RBP4.13□□□□□ -1.75
HMGB3P19-201ENST00000403971 KHKP50053 298 aa4.13□□□□□ -1.75
HMGB3P19-201ENST00000403971 VCPP55072 806 aaKnown RBP4.13□□□□□ -1.75
HMGB3P19-201ENST00000403971 EIF3EP60228 445 aaKnown RBP4.13□□□□□ -1.75
HMGB3P19-201ENST00000403971 OTUD4Q01804 1114 aaKnown RBP4.13□□□□□ -1.75
HMGB3P19-201ENST00000403971 SLC34A1Q06495 639 aa4.13□□□□□ -1.75
HMGB3P19-201ENST00000403971 PPIDQ08752 370 aaKnown RBP4.13□□□□□ -1.75
HMGB3P19-201ENST00000403971 FCHO2Q0JRZ9 810 aa4.13□□□□□ -1.75
HMGB3P19-201ENST00000403971 GPR50Q13585 617 aa4.13□□□□□ -1.75
HMGB3P19-201ENST00000403971 PDK1Q15118 436 aa4.13□□□□□ -1.75
HMGB3P19-201ENST00000403971 PARP15Q460N3 678 aa4.13□□□□□ -1.75
HMGB3P19-201ENST00000403971 FAM78AQ5JUQ0 283 aa4.13□□□□□ -1.75
HMGB3P19-201ENST00000403971 RWDD4Q6NW29 188 aaKnown RBP4.13□□□□□ -1.75
HMGB3P19-201ENST00000403971 CCDC137Q6PK04 289 aaKnown RBP4.13□□□□□ -1.75
HMGB3P19-201ENST00000403971 C4orf22Q6V702 233 aa4.13□□□□□ -1.75
HMGB3P19-201ENST00000403971 SETD3Q86TU7 594 aaPredicted RBP4.13□□□□□ -1.75
HMGB3P19-201ENST00000403971 LRRTM1Q86UE6 522 aa4.13□□□□□ -1.75
HMGB3P19-201ENST00000403971 CDKL3Q8IVW4 592 aaPredicted RBP4.13□□□□□ -1.75
HMGB3P19-201ENST00000403971 MFSD6LQ8IWD5 586 aa4.13□□□□□ -1.75
HMGB3P19-201ENST00000403971 BBS7Q8IWZ6 715 aa4.13□□□□□ -1.75
HMGB3P19-201ENST00000403971 SLC43A2Q8N370 569 aa4.13□□□□□ -1.75
HMGB3P19-201ENST00000403971 SFRP1Q8N474 314 aa4.13□□□□□ -1.75
HMGB3P19-201ENST00000403971 TMEM99Q8N816 258 aa4.13□□□□□ -1.75
HMGB3P19-201ENST00000403971 EIF1ADQ8N9N8 165 aaKnown RBP4.13□□□□□ -1.75
HMGB3P19-201ENST00000403971 OR13C5Q8NGS8 318 aa4.13□□□□□ -1.75
HMGB3P19-201ENST00000403971 RNASE8Q8TDE3 154 aaKnown RBP4.13□□□□□ -1.75
HMGB3P19-201ENST00000403971 GPR148Q8TDV2 347 aa4.13□□□□□ -1.75
HMGB3P19-201ENST00000403971 C1orf54Q8WWF1 131 aa4.13□□□□□ -1.75
HMGB3P19-201ENST00000403971 ELSPBP1Q96BH3 223 aa4.13□□□□□ -1.75
HMGB3P19-201ENST00000403971 MOCOSQ96EN8 888 aa4.13□□□□□ -1.75
HMGB3P19-201ENST00000403971 TMA16Q96EY4 203 aaKnown RBP4.13□□□□□ -1.75
HMGB3P19-201ENST00000403971 RPRD1AQ96P16 312 aaPredicted RBP4.13□□□□□ -1.75
HMGB3P19-201ENST00000403971 VAT1Q99536 393 aa4.13□□□□□ -1.75
HMGB3P19-201ENST00000403971 CDX2Q99626 313 aaPredicted RBP4.13□□□□□ -1.75
HMGB3P19-201ENST00000403971 MCRIP2Q9BUT9 160 aaKnown RBP4.13□□□□□ -1.75
HMGB3P19-201ENST00000403971 DDX47Q9H0S4 455 aaKnown RBP4.13□□□□□ -1.75
HMGB3P19-201ENST00000403971 POMKQ9H5K3 350 aa4.13□□□□□ -1.75
HMGB3P19-201ENST00000403971 UBE2ZQ9H832 354 aaPredicted RBP4.13□□□□□ -1.75
HMGB3P19-201ENST00000403971 ZFP14Q9HCL3 533 aa4.13□□□□□ -1.75
HMGB3P19-201ENST00000403971 PNPLA3Q9NST1 481 aa4.13□□□□□ -1.75
HMGB3P19-201ENST00000403971 ETNK2Q9NVF9 386 aa4.13□□□□□ -1.75
HMGB3P19-201ENST00000403971 NLGN3Q9NZ94 848 aa4.13□□□□□ -1.75
HMGB3P19-201ENST00000403971 NUDT4Q9NZJ9 180 aa4.13□□□□□ -1.75
HMGB3P19-201ENST00000403971 EPS15L1Q9UBC2 864 aa4.13□□□□□ -1.75
HMGB3P19-201ENST00000403971 TRPC4Q9UBN4 977 aa4.13□□□□□ -1.75
HMGB3P19-201ENST00000403971 XPO7Q9UIA9 1087 aaKnown RBP4.13□□□□□ -1.75
HMGB3P19-201ENST00000403971 DNPEPQ9ULA0 475 aa4.13□□□□□ -1.75
HMGB3P19-201ENST00000403971 CCL26Q9Y258 94 aa4.13□□□□□ -1.75
HMGB3P19-201ENST00000403971 ETV7Q9Y603 341 aa4.13□□□□□ -1.75
HMGB3P19-201ENST00000403971 SPTBN5Q9NRC6 3674 aaKnown RBP4.13□□□□□ -1.75
HMGB3P19-201ENST00000403971 MYLKQ15746 1914 aa4.13□□□□□ -1.75
HMGB3P19-201ENST00000403971 PIKFYVEQ9Y2I7 2098 aa4.12□□□□□ -1.75
HMGB3P19-201ENST00000403971 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.12□□□□□ -1.75
HMGB3P19-201ENST00000403971 GOLGA6L7A0A1B0GV03 622 aa4.12□□□□□ -1.75
HMGB3P19-201ENST00000403971 C5orf51A6NDU8 294 aa4.12□□□□□ -1.75
HMGB3P19-201ENST00000403971 ZSCAN5CA6NGD5 496 aaPredicted RBP4.12□□□□□ -1.75
HMGB3P19-201ENST00000403971 SERINC4A6NH21 518 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms