RNA–Protein interactions for RNA: ENST00000403890.7

NUP43-204, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 1,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-204ENST00000403890 STAG3L4Q8TBR4 150 aa8.11□□□□□ -1.11
NUP43-204ENST00000403890 WDR20Q8TBZ3 569 aa8.11□□□□□ -1.11
NUP43-204ENST00000403890 GRK7Q8WTQ7 553 aa8.11□□□□□ -1.11
NUP43-204ENST00000403890 UBTD2Q8WUN7 234 aa8.11□□□□□ -1.11
NUP43-204ENST00000403890 ZBTB8AQ96BR9 441 aa8.11□□□□□ -1.11
NUP43-204ENST00000403890 NPAS1Q99742 590 aa8.11□□□□□ -1.11
NUP43-204ENST00000403890 MRPL1Q9BYD6 325 aaKnown RBP8.11□□□□□ -1.11
NUP43-204ENST00000403890 SRXN1Q9BYN0 137 aa8.11□□□□□ -1.11
NUP43-204ENST00000403890 SAP130Q9H0E3 1048 aa8.11□□□□□ -1.11
NUP43-204ENST00000403890 RHOJQ9H4E5 214 aa8.11□□□□□ -1.11
NUP43-204ENST00000403890 BCO1Q9HAY6 547 aa8.11□□□□□ -1.11
NUP43-204ENST00000403890 HHATLQ9HCP6 504 aa8.11□□□□□ -1.11
NUP43-204ENST00000403890 LZTFL1Q9NQ48 299 aa8.11□□□□□ -1.11
NUP43-204ENST00000403890 PFDN4Q9NQP4 134 aa8.11□□□□□ -1.11
NUP43-204ENST00000403890 MRTO4Q9UKD2 239 aaKnown RBP8.11□□□□□ -1.11
NUP43-204ENST00000403890 SPEF1Q9Y4P9 236 aa8.11□□□□□ -1.11
NUP43-204ENST00000403890 A0A1W2PRB8 838 aa8.1□□□□□ -1.11
NUP43-204ENST00000403890 CIB4A0PJX0 185 aa8.1□□□□□ -1.11
NUP43-204ENST00000403890 CCT8L1PA6NM43 557 aa8.1□□□□□ -1.11
NUP43-204ENST00000403890 ADARB2-AS1A8MUL3 147 aa8.1□□□□□ -1.11
NUP43-204ENST00000403890 SUPT3HB4E1H0 165 aa8.1□□□□□ -1.11
NUP43-204ENST00000403890 PHGDHO43175 533 aaKnown RBP8.1□□□□□ -1.11
NUP43-204ENST00000403890 PLOD3O60568 738 aa8.1□□□□□ -1.11
NUP43-204ENST00000403890 KERAO60938 352 aa8.1□□□□□ -1.11
NUP43-204ENST00000403890 SUPT3HO75486 399 aa8.1□□□□□ -1.11
NUP43-204ENST00000403890 RAD51DO75771 328 aa8.1□□□□□ -1.11
NUP43-204ENST00000403890 UTS2O95399 124 aa8.1□□□□□ -1.11
NUP43-204ENST00000403890 CTAGE8P0CG41 777 aa8.1□□□□□ -1.11
NUP43-204ENST00000403890 HKR1P10072 659 aa8.1□□□□□ -1.11
NUP43-204ENST00000403890 CDC25BP30305 580 aa8.1□□□□□ -1.11
NUP43-204ENST00000403890 SFTPDP35247 375 aa8.1□□□□□ -1.11
NUP43-204ENST00000403890 PIK3CGP48736 1102 aa8.1□□□□□ -1.11
NUP43-204ENST00000403890 ALDH9A1P49189 494 aa8.1□□□□□ -1.11
NUP43-204ENST00000403890 ZNF41P51814 821 aaPredicted RBP8.1□□□□□ -1.11
NUP43-204ENST00000403890 PRR5P85299 388 aa8.1□□□□□ -1.11
NUP43-204ENST00000403890 MGAT5Q09328 741 aa8.1□□□□□ -1.11
NUP43-204ENST00000403890 ILF2Q12905 390 aaKnown RBP8.1□□□□□ -1.11
NUP43-204ENST00000403890 FRG1Q14331 258 aaKnown RBP8.1□□□□□ -1.11
NUP43-204ENST00000403890 PLPPR5Q32ZL2 321 aa8.1□□□□□ -1.11
NUP43-204ENST00000403890 HP1BP3Q5SSJ5 553 aaPredicted RBP8.1□□□□□ -1.11
NUP43-204ENST00000403890 CCDC137Q6PK04 289 aaKnown RBP8.1□□□□□ -1.11
NUP43-204ENST00000403890 APOOLQ6UXV4 268 aa8.1□□□□□ -1.11
NUP43-204ENST00000403890 TMEM139Q8IV31 216 aa8.1□□□□□ -1.11
NUP43-204ENST00000403890 CTAGE4Q8IX94 777 aa8.1□□□□□ -1.11
NUP43-204ENST00000403890 ZNF100Q8IYN0 542 aa8.1□□□□□ -1.11
NUP43-204ENST00000403890 TOR1AIP2Q8NFQ8 470 aa8.1□□□□□ -1.11
NUP43-204ENST00000403890 OR9A2Q8NGT5 310 aa8.1□□□□□ -1.11
NUP43-204ENST00000403890 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.1□□□□□ -1.11
NUP43-204ENST00000403890 ACTRT2Q8TDY3 377 aa8.1□□□□□ -1.11
NUP43-204ENST00000403890 SLC9A6Q92581 669 aa8.1□□□□□ -1.11
NUP43-204ENST00000403890 TMEM186Q96B77 213 aa8.1□□□□□ -1.11
NUP43-204ENST00000403890 TM4SF18Q96CE8 201 aa8.1□□□□□ -1.11
NUP43-204ENST00000403890 TSPAN17Q96FV3 270 aa8.1□□□□□ -1.11
NUP43-204ENST00000403890 PBKQ96KB5 322 aa8.1□□□□□ -1.11
NUP43-204ENST00000403890 UBXN10Q96LJ8 280 aa8.1□□□□□ -1.11
NUP43-204ENST00000403890 FAIM2Q9BWQ8 316 aa8.1□□□□□ -1.11
NUP43-204ENST00000403890 SUCNR1Q9BXA5 334 aa8.1□□□□□ -1.11
NUP43-204ENST00000403890 C1QTNF6Q9BXI9 259 aa8.1□□□□□ -1.11
NUP43-204ENST00000403890 CDC42EP4Q9H3Q1 356 aaKnown RBP8.1□□□□□ -1.11
NUP43-204ENST00000403890 ALG9Q9H6U8 611 aa8.1□□□□□ -1.11
NUP43-204ENST00000403890 CAB39LQ9H9S4 337 aa8.1□□□□□ -1.11
NUP43-204ENST00000403890 MED17Q9NVC6 651 aa8.1□□□□□ -1.11
NUP43-204ENST00000403890 HIF1ANQ9NWT6 349 aa8.1□□□□□ -1.11
NUP43-204ENST00000403890 MED29Q9NX70 200 aa8.1□□□□□ -1.11
NUP43-204ENST00000403890 NUDT4Q9NZJ9 180 aa8.1□□□□□ -1.11
NUP43-204ENST00000403890 NTMQ9P121 344 aa8.1□□□□□ -1.11
NUP43-204ENST00000403890 KLHL9Q9P2J3 617 aa8.1□□□□□ -1.11
NUP43-204ENST00000403890 DMGDHQ9UI17 866 aaKnown RBP8.1□□□□□ -1.11
NUP43-204ENST00000403890 UTS2RQ9UKP6 389 aa8.1□□□□□ -1.11
NUP43-204ENST00000403890 ACOT9Q9Y305 439 aa8.1□□□□□ -1.11
NUP43-204ENST00000403890 RNF11Q9Y3C5 154 aa8.1□□□□□ -1.11
NUP43-204ENST00000403890 GRIP1Q9Y3R0 1128 aa8.1□□□□□ -1.11
NUP43-204ENST00000403890 PCDHB14Q9Y5E9 798 aa8.1□□□□□ -1.11
NUP43-204ENST00000403890 GPC6Q9Y625 555 aaPredicted RBP8.1□□□□□ -1.11
NUP43-204ENST00000403890 A0A1W2PR80 420 aa8.09□□□□□ -1.11
NUP43-204ENST00000403890 A6NJY4 79 aa8.09□□□□□ -1.11
NUP43-204ENST00000403890 C9JVG2 144 aa8.09□□□□□ -1.11
NUP43-204ENST00000403890 RGS14O43566 566 aa8.09□□□□□ -1.11
NUP43-204ENST00000403890 DAOP14920 347 aa8.09□□□□□ -1.11
NUP43-204ENST00000403890 PGCP20142 388 aa8.09□□□□□ -1.11
NUP43-204ENST00000403890 ENPP1P22413 925 aa8.09□□□□□ -1.11
NUP43-204ENST00000403890 EDNRAP25101 427 aa8.09□□□□□ -1.11
NUP43-204ENST00000403890 SHC1P29353 583 aa8.09□□□□□ -1.11
NUP43-204ENST00000403890 CXCR5P32302 372 aa8.09□□□□□ -1.11
NUP43-204ENST00000403890 SERPINF1P36955 418 aa8.09□□□□□ -1.11
NUP43-204ENST00000403890 ELK3P41970 407 aa8.09□□□□□ -1.11
NUP43-204ENST00000403890 RFX3P48380 749 aa8.09□□□□□ -1.11
NUP43-204ENST00000403890 PSMD4P55036 377 aaKnown RBP8.09□□□□□ -1.11
NUP43-204ENST00000403890 ZNF155Q12901 538 aaPredicted RBP8.09□□□□□ -1.11
NUP43-204ENST00000403890 CCNIQ14094 377 aa8.09□□□□□ -1.11
NUP43-204ENST00000403890 PPP1R7Q15435 360 aa8.09□□□□□ -1.11
NUP43-204ENST00000403890 STEAP4Q687X5 459 aa8.09□□□□□ -1.11
NUP43-204ENST00000403890 COMMD6Q7Z4G1 85 aa8.09□□□□□ -1.11
NUP43-204ENST00000403890 SYT9Q86SS6 491 aa8.09□□□□□ -1.11
NUP43-204ENST00000403890 ISCA2Q86U28 154 aa8.09□□□□□ -1.11
NUP43-204ENST00000403890 SAMD14Q8IZD0 417 aaPredicted RBP8.09□□□□□ -1.11
NUP43-204ENST00000403890 METTL4Q8N3J2 472 aa8.09□□□□□ -1.11
NUP43-204ENST00000403890 TEX29Q8N6K0 151 aa8.09□□□□□ -1.11
NUP43-204ENST00000403890 L3MBTL4Q8NA19 623 aa8.09□□□□□ -1.11
NUP43-204ENST00000403890 POC1BQ8TC44 478 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms