RNA–Protein interactions for RNA: ENST00000402697.5

PRAME-203, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRAME, Length 2,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-203ENST00000402697 SLC35A3Q9Y2D2 325 aa12.09□□□□□ -0.47
PRAME-203ENST00000402697 PIAS3Q9Y6X2 628 aa12.09□□□□□ -0.47
PRAME-203ENST00000402697 C2CD4DB7Z1M9 353 aa12.09□□□□□ -0.47
PRAME-203ENST00000402697 GALR3O60755 368 aaPredicted RBP12.09□□□□□ -0.47
PRAME-203ENST00000402697 LYPD3O95274 346 aa12.09□□□□□ -0.47
PRAME-203ENST00000402697 CELP19835 753 aa12.09□□□□□ -0.47
PRAME-203ENST00000402697 NT5EP21589 574 aa12.09□□□□□ -0.47
PRAME-203ENST00000402697 NUDT1P36639 197 aa12.09□□□□□ -0.47
PRAME-203ENST00000402697 EVX1P49640 407 aa12.09□□□□□ -0.47
PRAME-203ENST00000402697 PSMD4P55036 377 aaKnown RBP12.09□□□□□ -0.47
PRAME-203ENST00000402697 CLDN2P57739 230 aa12.09□□□□□ -0.47
PRAME-203ENST00000402697 ACTC1P68032 377 aa12.09□□□□□ -0.47
PRAME-203ENST00000402697 ACTA1P68133 377 aa12.09□□□□□ -0.47
PRAME-203ENST00000402697 GPR18Q14330 331 aa12.09□□□□□ -0.47
PRAME-203ENST00000402697 GALEQ14376 348 aa12.09□□□□□ -0.47
PRAME-203ENST00000402697 PYDC2Q56P42 97 aa12.09□□□□□ -0.47
PRAME-203ENST00000402697 MARCH9Q86YJ5 346 aa12.09□□□□□ -0.47
PRAME-203ENST00000402697 CACTIN-AS1Q8N1I8 211 aa12.09□□□□□ -0.47
PRAME-203ENST00000402697 C19orf18Q8NEA5 215 aa12.09□□□□□ -0.47
PRAME-203ENST00000402697 OR4F15Q8NGB8 312 aa12.09□□□□□ -0.47
PRAME-203ENST00000402697 SPRYD4Q8WW59 207 aaPredicted RBP12.09□□□□□ -0.47
PRAME-203ENST00000402697 AHCYL2Q96HN2 611 aaKnown RBP12.09□□□□□ -0.47
PRAME-203ENST00000402697 MRGPRX1Q96LB2 322 aa12.09□□□□□ -0.47
PRAME-203ENST00000402697 TM9SF2Q99805 663 aa12.09□□□□□ -0.47
PRAME-203ENST00000402697 TRIM2Q9C040 744 aa12.09□□□□□ -0.47
PRAME-203ENST00000402697 C6orf106Q9H6K1 298 aaPredicted RBP12.09□□□□□ -0.47
PRAME-203ENST00000402697 PPP1R3EQ9H7J1 279 aa12.09□□□□□ -0.47
PRAME-203ENST00000402697 NEK6Q9HC98 313 aa12.09□□□□□ -0.47
PRAME-203ENST00000402697 TIGARQ9NQ88 270 aa12.09□□□□□ -0.47
PRAME-203ENST00000402697 MAT2BQ9NZL9 334 aa12.09□□□□□ -0.47
PRAME-203ENST00000402697 CD207Q9UJ71 328 aa12.09□□□□□ -0.47
PRAME-203ENST00000402697 TRIOO75962 3097 aa12.08□□□□□ -0.48
PRAME-203ENST00000402697 FAM172BPA6NC97 362 aa12.08□□□□□ -0.48
PRAME-203ENST00000402697 C10orf142B7Z368 130 aa12.08□□□□□ -0.48
PRAME-203ENST00000402697 CDC42EP2O14613 210 aa12.08□□□□□ -0.48
PRAME-203ENST00000402697 SCAMP1O15126 338 aa12.08□□□□□ -0.48
PRAME-203ENST00000402697 CHP2O43745 196 aa12.08□□□□□ -0.48
PRAME-203ENST00000402697 MT-ND5P03915 603 aa12.08□□□□□ -0.48
PRAME-203ENST00000402697 CLEC2LP0C7M8 214 aa12.08□□□□□ -0.48
PRAME-203ENST00000402697 IFI30P13284 250 aa12.08□□□□□ -0.48
PRAME-203ENST00000402697 POLR2CP19387 275 aaPredicted RBP12.08□□□□□ -0.48
PRAME-203ENST00000402697 HLA-DMAP28067 261 aa12.08□□□□□ -0.48
PRAME-203ENST00000402697 UBE2IP63279 158 aaKnown RBP12.08□□□□□ -0.48
PRAME-203ENST00000402697 ALG11Q2TAA5 492 aa12.08□□□□□ -0.48
PRAME-203ENST00000402697 TRMT12Q53H54 448 aaKnown RBP12.08□□□□□ -0.48
PRAME-203ENST00000402697 HACD4Q5VWC8 232 aa12.08□□□□□ -0.48
PRAME-203ENST00000402697 SMARCD3Q6STE5 483 aa12.08□□□□□ -0.48
PRAME-203ENST00000402697 PAMR1Q6UXH9 720 aa12.08□□□□□ -0.48
PRAME-203ENST00000402697 RD3Q7Z3Z2 195 aa12.08□□□□□ -0.48
PRAME-203ENST00000402697 OOSP2Q86WS3 158 aa12.08□□□□□ -0.48
PRAME-203ENST00000402697 GALNT12Q8IXK2 581 aa12.08□□□□□ -0.48
PRAME-203ENST00000402697 CMIPQ8IY22 773 aa12.08□□□□□ -0.48
PRAME-203ENST00000402697 FAM174AQ8TBP5 190 aa12.08□□□□□ -0.48
PRAME-203ENST00000402697 JPH3Q8WXH2 748 aaPredicted RBP12.08□□□□□ -0.48
PRAME-203ENST00000402697 TSACCQ96A04 125 aaPredicted RBP12.08□□□□□ -0.48
PRAME-203ENST00000402697 PHOX2BQ99453 314 aa12.08□□□□□ -0.48
PRAME-203ENST00000402697 ATF6BQ99941 703 aa12.08□□□□□ -0.48
PRAME-203ENST00000402697 LMF2Q9BU23 707 aaKnown RBP12.08□□□□□ -0.48
PRAME-203ENST00000402697 ADAP2Q9NPF8 381 aa12.08□□□□□ -0.48
PRAME-203ENST00000402697 MEIOCA2RUB1 952 aa12.07□□□□□ -0.48
PRAME-203ENST00000402697 RIIAD1A6NNX1 92 aa12.07□□□□□ -0.48
PRAME-203ENST00000402697 PRR23D1E9PI22 279 aaPredicted RBP12.07□□□□□ -0.48
PRAME-203ENST00000402697 SGK494L7N484 410 aa12.07□□□□□ -0.48
PRAME-203ENST00000402697 GTPBP1O00178 669 aaKnown RBP12.07□□□□□ -0.48
PRAME-203ENST00000402697 RNF13O43567 381 aa12.07□□□□□ -0.48
PRAME-203ENST00000402697 PIP5K1CO60331 668 aa12.07□□□□□ -0.48
PRAME-203ENST00000402697 CH25HO95992 272 aa12.07□□□□□ -0.48
PRAME-203ENST00000402697 IFNGP01579 166 aa12.07□□□□□ -0.48
PRAME-203ENST00000402697 ZGLP1P0C6A0 271 aa12.07□□□□□ -0.48
PRAME-203ENST00000402697 PRR23D2P0DMB1 279 aaPredicted RBP12.07□□□□□ -0.48
PRAME-203ENST00000402697 PRKAR1AP10644 381 aa12.07□□□□□ -0.48
PRAME-203ENST00000402697 POU3F3P20264 500 aaPredicted RBP12.07□□□□□ -0.48
PRAME-203ENST00000402697 TBXA2RP21731 343 aa12.07□□□□□ -0.48
PRAME-203ENST00000402697 S100A1P23297 94 aa12.07□□□□□ -0.48
PRAME-203ENST00000402697 SOX18P35713 384 aa12.07□□□□□ -0.48
PRAME-203ENST00000402697 FOXK2Q01167 660 aa12.07□□□□□ -0.48
PRAME-203ENST00000402697 ZNHIT3Q15649 155 aaPredicted RBP12.07□□□□□ -0.48
PRAME-203ENST00000402697 TRIQKQ629K1 86 aa12.07□□□□□ -0.48
PRAME-203ENST00000402697 RTL4Q6ZR62 310 aa12.07□□□□□ -0.48
PRAME-203ENST00000402697 CA13Q8N1Q1 262 aa12.07□□□□□ -0.48
PRAME-203ENST00000402697 TEX19Q8NA77 164 aa12.07□□□□□ -0.48
PRAME-203ENST00000402697 AVL9Q8NBF6 648 aa12.07□□□□□ -0.48
PRAME-203ENST00000402697 DUSP18Q8NEJ0 188 aa12.07□□□□□ -0.48
PRAME-203ENST00000402697 BPIFA2Q96DR5 249 aa12.07□□□□□ -0.48
PRAME-203ENST00000402697 ZNF578Q96N58 590 aaPredicted RBP12.07□□□□□ -0.48
PRAME-203ENST00000402697 FRMD6Q96NE9 622 aa12.07□□□□□ -0.48
PRAME-203ENST00000402697 FCRL4Q96PJ5 515 aa12.07□□□□□ -0.48
PRAME-203ENST00000402697 CCNL2Q96S94 520 aaPredicted RBP12.07□□□□□ -0.48
PRAME-203ENST00000402697 NDC1Q9BTX1 674 aa12.07□□□□□ -0.48
PRAME-203ENST00000402697 TRAF4Q9BUZ4 470 aaPredicted RBP12.07□□□□□ -0.48
PRAME-203ENST00000402697 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.07□□□□□ -0.485e-13■■■■■ 38.9
PRAME-203ENST00000402697 MIR1-1HGQ9H1L0 117 aa12.07□□□□□ -0.48
PRAME-203ENST00000402697 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.07□□□□□ -0.48
PRAME-203ENST00000402697 CPNE7Q9UBL6 633 aa12.07□□□□□ -0.48
PRAME-203ENST00000402697 SIGLEC7Q9Y286 467 aa12.07□□□□□ -0.48
PRAME-203ENST00000402697 CSNK1G3Q9Y6M4 447 aa12.07□□□□□ -0.48
PRAME-203ENST00000402697 DAPL1A0PJW8 107 aa12.07□□□□□ -0.48
PRAME-203ENST00000402697 PLPP2O43688 288 aa12.07□□□□□ -0.48
PRAME-203ENST00000402697 FGF17O60258 216 aa12.07□□□□□ -0.48
PRAME-203ENST00000402697 TMEM127O75204 238 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms