RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 KLHL36Q8N4N3 616 aa16.4■□□□□ 0.22
HLA-DQB1-204ENST00000399084 PARP16Q8N5Y8 322 aa16.4■□□□□ 0.22
HLA-DQB1-204ENST00000399084 ZNF485Q8NCK3 441 aa16.4■□□□□ 0.22
HLA-DQB1-204ENST00000399084 SLC2A12Q8TD20 617 aa16.4■□□□□ 0.22
HLA-DQB1-204ENST00000399084 BPIFA2Q96DR5 249 aa16.4■□□□□ 0.22
HLA-DQB1-204ENST00000399084 SAMD8Q96LT4 415 aa16.4■□□□□ 0.22
HLA-DQB1-204ENST00000399084 RHBDL2Q9NX52 303 aa16.4■□□□□ 0.22
HLA-DQB1-204ENST00000399084 CBLCQ9ULV8 474 aa16.4■□□□□ 0.22
HLA-DQB1-204ENST00000399084 NTNG1Q9Y2I2 539 aa16.4■□□□□ 0.22
HLA-DQB1-204ENST00000399084 CAB39Q9Y376 341 aaPredicted RBP16.4■□□□□ 0.22
HLA-DQB1-204ENST00000399084 SPIN1Q9Y657 262 aaPredicted RBP16.4■□□□□ 0.22
HLA-DQB1-204ENST00000399084 TRDV1A0A1B0GX56 115 aa16.39■□□□□ 0.21
HLA-DQB1-204ENST00000399084 NPIPB9F8W1W9 429 aa16.39■□□□□ 0.21
HLA-DQB1-204ENST00000399084 CDC42EP2O14613 210 aa16.39■□□□□ 0.21
HLA-DQB1-204ENST00000399084 HRO43593 1189 aa16.39■□□□□ 0.21
HLA-DQB1-204ENST00000399084 PTTG1O95997 202 aa16.39■□□□□ 0.21
HLA-DQB1-204ENST00000399084 PRG2P13727 222 aa16.39■□□□□ 0.21
HLA-DQB1-204ENST00000399084 CD53P19397 219 aa16.39■□□□□ 0.21
HLA-DQB1-204ENST00000399084 RPS19P39019 145 aaKnown RBP16.39■□□□□ 0.21
HLA-DQB1-204ENST00000399084 ATP12AP54707 1039 aa16.39■□□□□ 0.21
HLA-DQB1-204ENST00000399084 MAZP56270 477 aaKnown RBP16.39■□□□□ 0.21
HLA-DQB1-204ENST00000399084 SMAD2Q15796 467 aaKnown RBP16.39■□□□□ 0.21
HLA-DQB1-204ENST00000399084 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.39■□□□□ 0.21
HLA-DQB1-204ENST00000399084 SOWAHCQ53LP3 525 aaPredicted RBP16.39■□□□□ 0.21
HLA-DQB1-204ENST00000399084 LIPKQ5VXJ0 399 aa16.39■□□□□ 0.21
HLA-DQB1-204ENST00000399084 FIGNL1Q6PIW4 674 aa16.39■□□□□ 0.21
HLA-DQB1-204ENST00000399084 SMARCD3Q6STE5 483 aa16.39■□□□□ 0.21
HLA-DQB1-204ENST00000399084 TMPRSS11AQ6ZMR5 421 aa16.39■□□□□ 0.21
HLA-DQB1-204ENST00000399084 RTL4Q6ZR62 310 aa16.39■□□□□ 0.21
HLA-DQB1-204ENST00000399084 CXXC5Q7LFL8 322 aaKnown RBP16.39■□□□□ 0.21
HLA-DQB1-204ENST00000399084 ZNF761Q86XN6 746 aaPredicted RBP16.39■□□□□ 0.21
HLA-DQB1-204ENST00000399084 LYSMD2Q8IV50 215 aa16.39■□□□□ 0.21
HLA-DQB1-204ENST00000399084 SFTPA2Q8IWL1 248 aa16.39■□□□□ 0.21
HLA-DQB1-204ENST00000399084 CAMKK1Q8N5S9 505 aa16.39■□□□□ 0.21
HLA-DQB1-204ENST00000399084 FANK1Q8TC84 345 aa16.39■□□□□ 0.21
HLA-DQB1-204ENST00000399084 LMX1AQ8TE12 382 aa16.39■□□□□ 0.21
HLA-DQB1-204ENST00000399084 AP3S1Q92572 193 aa16.39■□□□□ 0.21
HLA-DQB1-204ENST00000399084 MVB12AQ96EY5 273 aa16.39■□□□□ 0.21
HLA-DQB1-204ENST00000399084 MAP3K3Q99759 626 aa16.39■□□□□ 0.21
HLA-DQB1-204ENST00000399084 SLC30A2Q9BRI3 323 aa16.39■□□□□ 0.21
HLA-DQB1-204ENST00000399084 HOXD1Q9GZZ0 328 aa16.39■□□□□ 0.21
HLA-DQB1-204ENST00000399084 UBE2ZQ9H832 354 aaPredicted RBP16.39■□□□□ 0.21
HLA-DQB1-204ENST00000399084 CMC2Q9NRP2 79 aa16.39■□□□□ 0.21
HLA-DQB1-204ENST00000399084 STARD5Q9NSY2 213 aa16.39■□□□□ 0.21
HLA-DQB1-204ENST00000399084 ASB6Q9NWX5 421 aa16.39■□□□□ 0.21
HLA-DQB1-204ENST00000399084 TXNL4BQ9NX01 149 aaKnown RBP16.39■□□□□ 0.21
HLA-DQB1-204ENST00000399084 GPR52Q9Y2T5 361 aa16.39■□□□□ 0.21
HLA-DQB1-204ENST00000399084 CACNA1IQ9P0X4 2223 aa16.39■□□□□ 0.21
HLA-DQB1-204ENST00000399084 CENPVL1A0A0U1RR11 272 aa16.39■□□□□ 0.21
HLA-DQB1-204ENST00000399084 GXYLT2A0PJZ3 443 aa16.39■□□□□ 0.21
HLA-DQB1-204ENST00000399084 SLC22A31A6NKX4 558 aa16.39■□□□□ 0.21
HLA-DQB1-204ENST00000399084 BHLHE40O14503 412 aa16.39■□□□□ 0.21
HLA-DQB1-204ENST00000399084 HLA-DPB1P04440 258 aa16.39■□□□□ 0.21
HLA-DQB1-204ENST00000399084 PAICSP22234 425 aaKnown RBP16.39■□□□□ 0.21
HLA-DQB1-204ENST00000399084 ATP6V1E1P36543 226 aa16.39■□□□□ 0.21
HLA-DQB1-204ENST00000399084 GPR3P46089 330 aa16.39■□□□□ 0.21
HLA-DQB1-204ENST00000399084 SLC9A3P48764 834 aa16.39■□□□□ 0.21
HLA-DQB1-204ENST00000399084 RNF144AP50876 292 aaPredicted RBP16.39■□□□□ 0.21
HLA-DQB1-204ENST00000399084 GAS6Q14393 721 aa16.39■□□□□ 0.21
HLA-DQB1-204ENST00000399084 FGFBP1Q14512 234 aa16.39■□□□□ 0.21
HLA-DQB1-204ENST00000399084 PERM1Q5SV97 790 aa16.39■□□□□ 0.21
HLA-DQB1-204ENST00000399084 AGAP7PQ5VUJ5 663 aa16.39■□□□□ 0.21
HLA-DQB1-204ENST00000399084 ULK3Q6PHR2 472 aa16.39■□□□□ 0.21
HLA-DQB1-204ENST00000399084 MEPCEQ7L2J0 689 aaKnown RBP16.39■□□□□ 0.21
HLA-DQB1-204ENST00000399084 SLC25A46Q96AG3 418 aa16.39■□□□□ 0.21
HLA-DQB1-204ENST00000399084 RNF167Q9H6Y7 350 aa16.39■□□□□ 0.21
HLA-DQB1-204ENST00000399084 FBXO34Q9NWN3 711 aa16.39■□□□□ 0.21
HLA-DQB1-204ENST00000399084 TNFRSF10DQ9UBN6 386 aa16.39■□□□□ 0.21
HLA-DQB1-204ENST00000399084 SIGLEC7Q9Y286 467 aa16.39■□□□□ 0.21
HLA-DQB1-204ENST00000399084 SLC35A3Q9Y2D2 325 aa16.39■□□□□ 0.21
HLA-DQB1-204ENST00000399084 SF3B6Q9Y3B4 125 aaKnown RBP16.39■□□□□ 0.21
HLA-DQB1-204ENST00000399084 MMACHCQ9Y4U1 282 aa16.39■□□□□ 0.21
HLA-DQB1-204ENST00000399084 TMEM131Q92545 1883 aa16.39■□□□□ 0.21
HLA-DQB1-204ENST00000399084 SYNDIG1LA6NDD5 238 aa16.38■□□□□ 0.21
HLA-DQB1-204ENST00000399084 AQP9O43315 295 aa16.38■□□□□ 0.21
HLA-DQB1-204ENST00000399084 HCRTR1O43613 425 aa16.38■□□□□ 0.21
HLA-DQB1-204ENST00000399084 PIP5K1CO60331 668 aa16.38■□□□□ 0.21
HLA-DQB1-204ENST00000399084 PTP4A3O75365 173 aa16.38■□□□□ 0.21
HLA-DQB1-204ENST00000399084 IGF2P01344 180 aa16.38■□□□□ 0.21
HLA-DQB1-204ENST00000399084 GKN3PP0CG01 181 aa16.38■□□□□ 0.21
HLA-DQB1-204ENST00000399084 TBXA2RP21731 343 aa16.38■□□□□ 0.21
HLA-DQB1-204ENST00000399084 LCN1P31025 176 aa16.38■□□□□ 0.21
HLA-DQB1-204ENST00000399084 MLLT3P42568 568 aaPredicted RBP16.38■□□□□ 0.21
HLA-DQB1-204ENST00000399084 GPR143P51810 404 aa16.38■□□□□ 0.21
HLA-DQB1-204ENST00000399084 LINC00114Q6XXX2 140 aa16.38■□□□□ 0.21
HLA-DQB1-204ENST00000399084 ACBD7Q8N6N7 88 aa16.38■□□□□ 0.21
HLA-DQB1-204ENST00000399084 DNAJA4Q8WW22 397 aaPredicted RBP16.38■□□□□ 0.21
HLA-DQB1-204ENST00000399084 SMURF1Q9HCE7 757 aa16.38■□□□□ 0.21
HLA-DQB1-204ENST00000399084 HAO2Q9NYQ3 351 aa16.38■□□□□ 0.21
HLA-DQB1-204ENST00000399084 COLQQ9Y215 455 aaPredicted RBP16.38■□□□□ 0.21
HLA-DQB1-204ENST00000399084 PCDHGB6Q9Y5F9 930 aa16.38■□□□□ 0.21
HLA-DQB1-204ENST00000399084 J3QRE1 110 aa16.37■□□□□ 0.21
HLA-DQB1-204ENST00000399084 PPM1BO75688 479 aa16.37■□□□□ 0.21
HLA-DQB1-204ENST00000399084 WNT1P04628 370 aa16.37■□□□□ 0.21
HLA-DQB1-204ENST00000399084 CFL1P23528 166 aaKnown RBP16.37■□□□□ 0.21
HLA-DQB1-204ENST00000399084 ADH7P40394 386 aa16.37■□□□□ 0.21
HLA-DQB1-204ENST00000399084 ACAA2P42765 397 aaKnown RBP16.37■□□□□ 0.21
HLA-DQB1-204ENST00000399084 STARD6P59095 220 aa16.37■□□□□ 0.21
HLA-DQB1-204ENST00000399084 DEFB110Q30KQ9 67 aa16.37■□□□□ 0.21
HLA-DQB1-204ENST00000399084 C14orf28Q4W4Y0 310 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms