RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 AP1M2Q9Y6Q5 423 aa9.22□□□□□ -0.93
PTCHD4-202ENST00000398738 MYOFQ9NZM1 2061 aa9.21□□□□□ -0.93
PTCHD4-202ENST00000398738 hCG_1807616A0A1W2PRN6 198 aa9.21□□□□□ -0.93
PTCHD4-202ENST00000398738 NEDD8-MDP1E9PL57 170 aa9.21□□□□□ -0.93
PTCHD4-202ENST00000398738 TOR1AO14656 332 aa9.21□□□□□ -0.93
PTCHD4-202ENST00000398738 SLC9A3R1O14745 358 aaPredicted RBP9.21□□□□□ -0.93
PTCHD4-202ENST00000398738 TMPRSS11DO60235 418 aa9.21□□□□□ -0.93
PTCHD4-202ENST00000398738 OR5F1O95221 314 aa9.21□□□□□ -0.93
PTCHD4-202ENST00000398738 EPPINO95925 133 aa9.21□□□□□ -0.93
PTCHD4-202ENST00000398738 HMGN2P05204 90 aaKnown RBP9.21□□□□□ -0.93
PTCHD4-202ENST00000398738 TRHRP34981 398 aaPredicted RBP9.21□□□□□ -0.93
PTCHD4-202ENST00000398738 RPL35P42766 123 aaKnown RBP9.21□□□□□ -0.93
PTCHD4-202ENST00000398738 MAGEB1P43366 347 aa9.21□□□□□ -0.93
PTCHD4-202ENST00000398738 FNTBP49356 437 aa9.21□□□□□ -0.93
PTCHD4-202ENST00000398738 CCINQ13939 588 aa9.21□□□□□ -0.93
PTCHD4-202ENST00000398738 C1orf94Q6P1W5 598 aa9.21□□□□□ -0.93
PTCHD4-202ENST00000398738 CD200R1LQ6Q8B3 271 aa9.21□□□□□ -0.93
PTCHD4-202ENST00000398738 GDPD4Q6W3E5 623 aa9.21□□□□□ -0.93
PTCHD4-202ENST00000398738 C3P1Q6ZMU1 363 aa9.21□□□□□ -0.93
PTCHD4-202ENST00000398738 GPALPP1Q8IXQ4 340 aa9.21□□□□□ -0.93
PTCHD4-202ENST00000398738 ACBD7Q8N6N7 88 aa9.21□□□□□ -0.93
PTCHD4-202ENST00000398738 OR5W2Q8NH69 310 aa9.21□□□□□ -0.93
PTCHD4-202ENST00000398738 OR2M2Q96R28 347 aa9.21□□□□□ -0.93
PTCHD4-202ENST00000398738 HCAR1Q9BXC0 346 aa9.21□□□□□ -0.93
PTCHD4-202ENST00000398738 ZNF436Q9C0F3 470 aaPredicted RBP9.21□□□□□ -0.93
PTCHD4-202ENST00000398738 BABAM2Q9NXR7 383 aa9.21□□□□□ -0.93
PTCHD4-202ENST00000398738 LSM7Q9UK45 103 aaKnown RBP9.21□□□□□ -0.93
PTCHD4-202ENST00000398738 KNL1Q8NG31 2342 aa9.21□□□□□ -0.94
PTCHD4-202ENST00000398738 FXYD6-FXYD2A0A087WZ82 144 aa9.21□□□□□ -0.94
PTCHD4-202ENST00000398738 TRABD2BA6NFA1 517 aa9.21□□□□□ -0.94
PTCHD4-202ENST00000398738 K7ESM1 405 aa9.21□□□□□ -0.94
PTCHD4-202ENST00000398738 PSMD9O00233 223 aa9.21□□□□□ -0.94
PTCHD4-202ENST00000398738 OR1F1O43749 312 aa9.21□□□□□ -0.94
PTCHD4-202ENST00000398738 POP4O95707 220 aaKnown RBP9.21□□□□□ -0.94
PTCHD4-202ENST00000398738 IFNA16P05015 189 aa9.21□□□□□ -0.94
PTCHD4-202ENST00000398738 RFX3P48380 749 aa9.21□□□□□ -0.94
PTCHD4-202ENST00000398738 OR12D2P58182 307 aa9.21□□□□□ -0.94
PTCHD4-202ENST00000398738 ERVFC1P60507 584 aa9.21□□□□□ -0.94
PTCHD4-202ENST00000398738 NDUFAF5Q5TEU4 345 aa9.21□□□□□ -0.94
PTCHD4-202ENST00000398738 NHLRC1Q6VVB1 395 aa9.21□□□□□ -0.94
PTCHD4-202ENST00000398738 CXXC5Q7LFL8 322 aaKnown RBP9.21□□□□□ -0.94
PTCHD4-202ENST00000398738 TMCO2Q7Z6W1 182 aaPredicted RBP9.21□□□□□ -0.94
PTCHD4-202ENST00000398738 OR5AR1Q8NGP9 310 aa9.21□□□□□ -0.94
PTCHD4-202ENST00000398738 TMEM255BQ8WV15 326 aa9.21□□□□□ -0.94
PTCHD4-202ENST00000398738 YIPF5Q969M3 257 aa9.21□□□□□ -0.94
PTCHD4-202ENST00000398738 CHFRQ96EP1 664 aa9.21□□□□□ -0.94
PTCHD4-202ENST00000398738 KLHL15Q96M94 604 aa9.21□□□□□ -0.94
PTCHD4-202ENST00000398738 FXYD6Q9H0Q3 95 aa9.21□□□□□ -0.94
PTCHD4-202ENST00000398738 A4GALTQ9NPC4 353 aa9.21□□□□□ -0.94
PTCHD4-202ENST00000398738 KLHL42Q9P2K6 505 aa9.21□□□□□ -0.94
PTCHD4-202ENST00000398738 GPN3Q9UHW5 284 aaPredicted RBP9.21□□□□□ -0.94
PTCHD4-202ENST00000398738 PHF11Q9UIL8 331 aa9.21□□□□□ -0.94
PTCHD4-202ENST00000398738 FBXL4Q9UKA2 621 aa9.21□□□□□ -0.94
PTCHD4-202ENST00000398738 C7orf66A4D0T2 115 aa9.2□□□□□ -0.94
PTCHD4-202ENST00000398738 KPNA3O00505 521 aaPredicted RBP9.2□□□□□ -0.94
PTCHD4-202ENST00000398738 SCAMP1O15126 338 aa9.2□□□□□ -0.94
PTCHD4-202ENST00000398738 ADRB1P08588 477 aa9.2□□□□□ -0.94
PTCHD4-202ENST00000398738 PRG2P13727 222 aa9.2□□□□□ -0.94
PTCHD4-202ENST00000398738 ANXA7P20073 488 aaKnown RBP9.2□□□□□ -0.94
PTCHD4-202ENST00000398738 RAD52P43351 418 aa9.2□□□□□ -0.94
PTCHD4-202ENST00000398738 GBX2P52951 348 aaPredicted RBP9.2□□□□□ -0.94
PTCHD4-202ENST00000398738 RGS8P57771 180 aaPredicted RBP9.2□□□□□ -0.94
PTCHD4-202ENST00000398738 PRAMEF14Q5SWL7 426 aa9.2□□□□□ -0.94
PTCHD4-202ENST00000398738 C9orf64Q5T6V5 341 aa9.2□□□□□ -0.94
PTCHD4-202ENST00000398738 PRAMEF13Q5VWM6 474 aa9.2□□□□□ -0.94
PTCHD4-202ENST00000398738 OR5M10Q6IEU7 315 aa9.2□□□□□ -0.94
PTCHD4-202ENST00000398738 ATRAIDQ6UW56 229 aa9.2□□□□□ -0.94
PTCHD4-202ENST00000398738 PIGXQ8TBF5 258 aa9.2□□□□□ -0.94
PTCHD4-202ENST00000398738 GLYATL1Q969I3 302 aa9.2□□□□□ -0.94
PTCHD4-202ENST00000398738 GINS4Q9BRT9 223 aa9.2□□□□□ -0.94
PTCHD4-202ENST00000398738 TEX12Q9BXU0 123 aa9.2□□□□□ -0.94
PTCHD4-202ENST00000398738 DPH1Q9BZG8 443 aa9.2□□□□□ -0.94
PTCHD4-202ENST00000398738 ENKD1Q9H0I2 346 aa9.2□□□□□ -0.94
PTCHD4-202ENST00000398738 SIRT3Q9NTG7 399 aaPredicted RBP9.2□□□□□ -0.94
PTCHD4-202ENST00000398738 SCP2D1Q9UJQ7 156 aa9.2□□□□□ -0.94
PTCHD4-202ENST00000398738 Q9Y3F1 56 aa9.2□□□□□ -0.94
PTCHD4-202ENST00000398738 SESN1Q9Y6P5 492 aa9.2□□□□□ -0.94
PTCHD4-202ENST00000398738 INPPL1O15357 1258 aa9.2□□□□□ -0.94
PTCHD4-202ENST00000398738 FMO6PO60774 539 aa9.2□□□□□ -0.94
PTCHD4-202ENST00000398738 LPLP06858 475 aa9.2□□□□□ -0.94
PTCHD4-202ENST00000398738 ELFN1P0C7U0 828 aa9.2□□□□□ -0.94
PTCHD4-202ENST00000398738 SSR2P43308 183 aa9.2□□□□□ -0.94
PTCHD4-202ENST00000398738 ACSM3Q53FZ2 586 aa9.2□□□□□ -0.94
PTCHD4-202ENST00000398738 TMEM255AQ5JRV8 349 aa9.2□□□□□ -0.94
PTCHD4-202ENST00000398738 HES5Q5TA89 166 aa9.2□□□□□ -0.94
PTCHD4-202ENST00000398738 PYHIN1Q6K0P9 492 aa9.2□□□□□ -0.94
PTCHD4-202ENST00000398738 GPAT4Q86UL3 456 aa9.2□□□□□ -0.94
PTCHD4-202ENST00000398738 TMEM25Q86YD3 366 aa9.2□□□□□ -0.94
PTCHD4-202ENST00000398738 C2orf69Q8N8R5 385 aa9.2□□□□□ -0.94
PTCHD4-202ENST00000398738 OR52B4Q8NGK2 314 aa9.2□□□□□ -0.94
PTCHD4-202ENST00000398738 OR9A1PQ8NGU1 263 aa9.2□□□□□ -0.94
PTCHD4-202ENST00000398738 C4orf36Q96KX1 117 aa9.2□□□□□ -0.94
PTCHD4-202ENST00000398738 SEMA4CQ9C0C4 833 aa9.2□□□□□ -0.94
PTCHD4-202ENST00000398738 ARL6Q9H0F7 186 aa9.2□□□□□ -0.94
PTCHD4-202ENST00000398738 GLIPR2Q9H4G4 154 aa9.2□□□□□ -0.94
PTCHD4-202ENST00000398738 CA10Q9NS85 328 aa9.2□□□□□ -0.94
PTCHD4-202ENST00000398738 AHSPQ9NZD4 102 aa9.2□□□□□ -0.94
PTCHD4-202ENST00000398738 NFKBIL1Q9UBC1 381 aaPredicted RBP9.2□□□□□ -0.94
PTCHD4-202ENST00000398738 KLK11Q9UBX7 282 aa9.2□□□□□ -0.94
PTCHD4-202ENST00000398738 DOCK6Q96HP0 2047 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 125 ms