RNA–Protein interactions for RNA: ENST00000398153.6

HDDC2-202, Transcript of HD domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDDC2, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-202ENST00000398153 ZFP3Q96NJ6 502 aa12.92□□□□□ -0.34
HDDC2-202ENST00000398153 TMEM120AQ9BXJ8 343 aa12.92□□□□□ -0.34
HDDC2-202ENST00000398153 SLC6A13Q9NSD5 602 aa12.92□□□□□ -0.34
HDDC2-202ENST00000398153 PAQR5Q9NXK6 330 aaPredicted RBP12.92□□□□□ -0.34
HDDC2-202ENST00000398153 KLHL14Q9P2G3 628 aa12.92□□□□□ -0.34
HDDC2-202ENST00000398153 P2RX2Q9UBL9 471 aa12.92□□□□□ -0.34
HDDC2-202ENST00000398153 MKLN1Q9UL63 735 aa12.92□□□□□ -0.34
HDDC2-202ENST00000398153 HECTD1Q9ULT8 2610 aa12.92□□□□□ -0.34
HDDC2-202ENST00000398153 RNF6Q9Y252 685 aa12.92□□□□□ -0.34
HDDC2-202ENST00000398153 RPH3AQ9Y2J0 694 aaPredicted RBP12.92□□□□□ -0.34
HDDC2-202ENST00000398153 GPC6Q9Y625 555 aaPredicted RBP12.92□□□□□ -0.34
HDDC2-202ENST00000398153 ICE1Q9Y2F5 2266 aa12.92□□□□□ -0.34
HDDC2-202ENST00000398153 A1L4Q6 167 aa12.91□□□□□ -0.34
HDDC2-202ENST00000398153 MBD3L4A6NDZ8 208 aaPredicted RBP12.91□□□□□ -0.34
HDDC2-202ENST00000398153 MBD3L3A6NE82 208 aaPredicted RBP12.91□□□□□ -0.34
HDDC2-202ENST00000398153 MBD3L5A6NJ08 208 aaPredicted RBP12.91□□□□□ -0.34
HDDC2-202ENST00000398153 H0Y3Z8 333 aa12.91□□□□□ -0.34
HDDC2-202ENST00000398153 NR5A2O00482 541 aa12.91□□□□□ -0.34
HDDC2-202ENST00000398153 DYNC1I1O14576 645 aa12.91□□□□□ -0.34
HDDC2-202ENST00000398153 DNAJA2O60884 412 aa12.91□□□□□ -0.34
HDDC2-202ENST00000398153 H6PDO95479 791 aa12.91□□□□□ -0.34
HDDC2-202ENST00000398153 NR2F1P10589 423 aa12.91□□□□□ -0.34
HDDC2-202ENST00000398153 BMP2P12643 396 aa12.91□□□□□ -0.34
HDDC2-202ENST00000398153 HOXB9P17482 250 aaPredicted RBP12.91□□□□□ -0.34
HDDC2-202ENST00000398153 POU3F2P20265 443 aaPredicted RBP12.91□□□□□ -0.34
HDDC2-202ENST00000398153 ELK4P28324 431 aa12.91□□□□□ -0.34
HDDC2-202ENST00000398153 CEACAM8P31997 349 aaPredicted RBP12.91□□□□□ -0.34
HDDC2-202ENST00000398153 CRATP43155 626 aa12.91□□□□□ -0.34
HDDC2-202ENST00000398153 CRISP3P54108 245 aa12.91□□□□□ -0.34
HDDC2-202ENST00000398153 CASP9P55211 416 aa12.91□□□□□ -0.34
HDDC2-202ENST00000398153 ZNF117Q03924 483 aa12.91□□□□□ -0.34
HDDC2-202ENST00000398153 FUT5Q11128 374 aa12.91□□□□□ -0.34
HDDC2-202ENST00000398153 CBFBQ13951 182 aa12.91□□□□□ -0.34
HDDC2-202ENST00000398153 FGFBP1Q14512 234 aa12.91□□□□□ -0.34
HDDC2-202ENST00000398153 RGNQ15493 299 aa12.91□□□□□ -0.34
HDDC2-202ENST00000398153 PLPPR5Q32ZL2 321 aa12.91□□□□□ -0.34
HDDC2-202ENST00000398153 DCST1Q5T197 706 aa12.91□□□□□ -0.34
HDDC2-202ENST00000398153 PRAMEF8Q5VWM4 474 aa12.91□□□□□ -0.34
HDDC2-202ENST00000398153 PRAMEF7Q5VXH5 474 aa12.91□□□□□ -0.34
HDDC2-202ENST00000398153 SLC2A7Q6PXP3 512 aa12.91□□□□□ -0.34
HDDC2-202ENST00000398153 ARSKQ6UWY0 536 aa12.91□□□□□ -0.34
HDDC2-202ENST00000398153 CHMP1BQ7LBR1 199 aa12.91□□□□□ -0.34
HDDC2-202ENST00000398153 RPRMLQ8N4K4 120 aa12.91□□□□□ -0.34
HDDC2-202ENST00000398153 DPP10Q8N608 796 aa12.91□□□□□ -0.34
HDDC2-202ENST00000398153 METTL25Q8N6Q8 603 aa12.91□□□□□ -0.34
HDDC2-202ENST00000398153 GATSQ8NAP1 163 aa12.91□□□□□ -0.34
HDDC2-202ENST00000398153 OR5W2Q8NH69 310 aa12.91□□□□□ -0.34
HDDC2-202ENST00000398153 MBD3L2Q8NHZ7 208 aaPredicted RBP12.91□□□□□ -0.34
HDDC2-202ENST00000398153 THOC1Q96FV9 657 aaKnown RBP12.91□□□□□ -0.34
HDDC2-202ENST00000398153 ZNF317Q96PQ6 595 aaPredicted RBP12.91□□□□□ -0.34
HDDC2-202ENST00000398153 TM9SF2Q99805 663 aa12.91□□□□□ -0.34
HDDC2-202ENST00000398153 LAT2Q9GZY6 243 aa12.91□□□□□ -0.34
HDDC2-202ENST00000398153 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.91□□□□□ -0.34
HDDC2-202ENST00000398153 MED17Q9NVC6 651 aa12.91□□□□□ -0.34
HDDC2-202ENST00000398153 ZNF629Q9UEG4 869 aaPredicted RBP12.91□□□□□ -0.34
HDDC2-202ENST00000398153 KCNE5Q9UJ90 142 aa12.91□□□□□ -0.34
HDDC2-202ENST00000398153 LEF1Q9UJU2 399 aaPredicted RBP12.91□□□□□ -0.34
HDDC2-202ENST00000398153 NDUFAF1Q9Y375 327 aa12.91□□□□□ -0.34
HDDC2-202ENST00000398153 ZNF337Q9Y3M9 751 aa12.91□□□□□ -0.34
HDDC2-202ENST00000398153 PCNX3Q9H6A9 2034 aa12.91□□□□□ -0.34
HDDC2-202ENST00000398153 SETXQ7Z333 2677 aaKnown RBP12.91□□□□□ -0.34
HDDC2-202ENST00000398153 PRAMEF27A3QJZ7 478 aa12.9□□□□□ -0.34
HDDC2-202ENST00000398153 AGAP5A6NIR3 686 aa12.9□□□□□ -0.34
HDDC2-202ENST00000398153 C17orf51A8MQB3 221 aa12.9□□□□□ -0.34
HDDC2-202ENST00000398153 ETV2O00321 342 aaPredicted RBP12.9□□□□□ -0.34
HDDC2-202ENST00000398153 ANGPT2O15123 496 aa12.9□□□□□ -0.34
HDDC2-202ENST00000398153 TNFRSF21O75509 655 aa12.9□□□□□ -0.34
HDDC2-202ENST00000398153 CSTAP01040 98 aa12.9□□□□□ -0.34
HDDC2-202ENST00000398153 TFPTP0C1Z6 253 aa12.9□□□□□ -0.34
HDDC2-202ENST00000398153 LINGO3P0C6S8 592 aa12.9□□□□□ -0.34
HDDC2-202ENST00000398153 CAPN3P20807 821 aa12.9□□□□□ -0.34
HDDC2-202ENST00000398153 ME2P23368 584 aa12.9□□□□□ -0.34
HDDC2-202ENST00000398153 HTR1EP28566 365 aa12.9□□□□□ -0.34
HDDC2-202ENST00000398153 DSTNP60981 165 aa12.9□□□□□ -0.34
HDDC2-202ENST00000398153 RPS3AP61247 264 aaKnown RBP12.9□□□□□ -0.34
HDDC2-202ENST00000398153 RAC1P63000 192 aa12.9□□□□□ -0.34
HDDC2-202ENST00000398153 KCNJ10P78508 379 aa12.9□□□□□ -0.34
HDDC2-202ENST00000398153 SYPL1Q16563 259 aa12.9□□□□□ -0.34
HDDC2-202ENST00000398153 SLC25A35Q3KQZ1 300 aa12.9□□□□□ -0.34
HDDC2-202ENST00000398153 COX20Q5RI15 118 aa12.9□□□□□ -0.34
HDDC2-202ENST00000398153 CBLN3Q6UW01 205 aa12.9□□□□□ -0.34
HDDC2-202ENST00000398153 DNAJC14Q6Y2X3 702 aaPredicted RBP12.9□□□□□ -0.34
HDDC2-202ENST00000398153 ZNF614Q8N883 585 aa12.9□□□□□ -0.34
HDDC2-202ENST00000398153 FAM71CQ8NEG0 241 aa12.9□□□□□ -0.34
HDDC2-202ENST00000398153 GPR119Q8TDV5 335 aa12.9□□□□□ -0.34
HDDC2-202ENST00000398153 WNT2BQ93097 391 aa12.9□□□□□ -0.34
HDDC2-202ENST00000398153 SH3YL1Q96HL8 342 aaPredicted RBP12.9□□□□□ -0.34
HDDC2-202ENST00000398153 MRGPRX4Q96LA9 322 aa12.9□□□□□ -0.34
HDDC2-202ENST00000398153 SLC38A1Q9H2H9 487 aa12.9□□□□□ -0.34
HDDC2-202ENST00000398153 KCNJ16Q9NPI9 418 aa12.9□□□□□ -0.34
HDDC2-202ENST00000398153 EXOSC3Q9NQT5 275 aaKnown RBP12.9□□□□□ -0.34
HDDC2-202ENST00000398153 VDAC3Q9Y277 283 aa12.9□□□□□ -0.34
HDDC2-202ENST00000398153 CARD8Q9Y2G2 431 aa12.9□□□□□ -0.34
HDDC2-202ENST00000398153 L3MBTL1Q9Y468 752 aa12.9□□□□□ -0.34
HDDC2-202ENST00000398153 PCNX1Q96RV3 2341 aa12.9□□□□□ -0.34
HDDC2-202ENST00000398153 TRBV5-3A0A0A0MS03 114 aa12.89□□□□□ -0.35
HDDC2-202ENST00000398153 NPIPA5A0A0B4J1W7 369 aa12.89□□□□□ -0.35
HDDC2-202ENST00000398153 A0A0G2JNJ9 132 aa12.89□□□□□ -0.35
HDDC2-202ENST00000398153 A0A0G2JPF8 293 aa12.89□□□□□ -0.35
HDDC2-202ENST00000398153 EVPLLA8MZ36 301 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms