RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 UNGP13051 313 aaPredicted RBP6.13□□□□□ -1.43
SMCO1-201ENST00000397537 IRF2P14316 349 aa6.13□□□□□ -1.43
SMCO1-201ENST00000397537 LORP23490 312 aaPredicted RBP6.13□□□□□ -1.43
SMCO1-201ENST00000397537 GTF2E2P29084 291 aaKnown RBP6.13□□□□□ -1.43
SMCO1-201ENST00000397537 GNA11P29992 359 aa6.13□□□□□ -1.43
SMCO1-201ENST00000397537 APOBEC3AP31941 199 aaPredicted RBP6.13□□□□□ -1.43
SMCO1-201ENST00000397537 AHRP35869 848 aa6.13□□□□□ -1.43
SMCO1-201ENST00000397537 HSPA9P38646 679 aaKnown RBP6.13□□□□□ -1.43
SMCO1-201ENST00000397537 ID1P41134 155 aa6.13□□□□□ -1.43
SMCO1-201ENST00000397537 CDKN2CP42773 168 aa6.13□□□□□ -1.43
SMCO1-201ENST00000397537 ACLYP53396 1101 aa6.13□□□□□ -1.43
SMCO1-201ENST00000397537 PPP2CBP62714 309 aa6.13□□□□□ -1.43
SMCO1-201ENST00000397537 PPP2CAP67775 309 aa6.13□□□□□ -1.43
SMCO1-201ENST00000397537 ZNF33BQ06732 778 aa6.13□□□□□ -1.43
SMCO1-201ENST00000397537 DLX2Q07687 328 aaPredicted RBP6.13□□□□□ -1.43
SMCO1-201ENST00000397537 FAM27E3Q08E93 113 aa6.13□□□□□ -1.43
SMCO1-201ENST00000397537 STX5Q13190 355 aa6.13□□□□□ -1.43
SMCO1-201ENST00000397537 SNTA1Q13424 505 aa6.13□□□□□ -1.43
SMCO1-201ENST00000397537 KPNB1Q14974 876 aaKnown RBP6.13□□□□□ -1.43
SMCO1-201ENST00000397537 CYTH1Q15438 398 aa6.13□□□□□ -1.43
SMCO1-201ENST00000397537 VAMP3Q15836 100 aa6.13□□□□□ -1.43
SMCO1-201ENST00000397537 KNOP1Q1ED39 458 aaKnown RBP6.13□□□□□ -1.43
SMCO1-201ENST00000397537 CT45A2Q5DJT8 189 aa6.13□□□□□ -1.43
SMCO1-201ENST00000397537 CCNJQ5T5M9 372 aa6.13□□□□□ -1.43
SMCO1-201ENST00000397537 ABHD17BQ5VST6 288 aa6.13□□□□□ -1.43
SMCO1-201ENST00000397537 C4orf22Q6V702 233 aa6.13□□□□□ -1.43
SMCO1-201ENST00000397537 GOLGA7Q7Z5G4 137 aa6.13□□□□□ -1.43
SMCO1-201ENST00000397537 PLD3Q8IV08 490 aa6.13□□□□□ -1.43
SMCO1-201ENST00000397537 CMTM8Q8IZV2 173 aa6.13□□□□□ -1.43
SMCO1-201ENST00000397537 CLEC4FQ8N1N0 589 aa6.13□□□□□ -1.43
SMCO1-201ENST00000397537 TMEM132CQ8N3T6 1108 aa6.13□□□□□ -1.43
SMCO1-201ENST00000397537 ARFGAP1Q8N6T3 406 aa6.13□□□□□ -1.43
SMCO1-201ENST00000397537 CNBD1Q8NA66 436 aa6.13□□□□□ -1.43
SMCO1-201ENST00000397537 ZNF548Q8NEK5 533 aaPredicted RBP6.13□□□□□ -1.43
SMCO1-201ENST00000397537 NFAM1Q8NET5 270 aaPredicted RBP6.13□□□□□ -1.43
SMCO1-201ENST00000397537 MDGA1Q8NFP4 955 aa6.13□□□□□ -1.43
SMCO1-201ENST00000397537 ABHD11Q8NFV4 315 aa6.13□□□□□ -1.43
SMCO1-201ENST00000397537 WDR36Q8NI36 951 aaKnown RBP6.13□□□□□ -1.43
SMCO1-201ENST00000397537 RP9Q8TA86 221 aaKnown RBP6.13□□□□□ -1.43
SMCO1-201ENST00000397537 HMGCLL1Q8TB92 370 aa6.13□□□□□ -1.43
SMCO1-201ENST00000397537 TMEM37Q8WXS4 190 aa6.13□□□□□ -1.43
SMCO1-201ENST00000397537 SLC38A2Q96QD8 506 aa6.13□□□□□ -1.43
SMCO1-201ENST00000397537 FAM234AQ9H0X4 552 aa6.13□□□□□ -1.43
SMCO1-201ENST00000397537 LHX5Q9H2C1 402 aa6.13□□□□□ -1.43
SMCO1-201ENST00000397537 R3HDMLQ9H3Y0 253 aa6.13□□□□□ -1.43
SMCO1-201ENST00000397537 RIMS4Q9H426 269 aaPredicted RBP6.13□□□□□ -1.43
SMCO1-201ENST00000397537 NOX4Q9NPH5 578 aa6.13□□□□□ -1.43
SMCO1-201ENST00000397537 LYARQ9NX58 379 aaKnown RBP6.13□□□□□ -1.43
SMCO1-201ENST00000397537 ELOVL2Q9NXB9 296 aa6.13□□□□□ -1.43
SMCO1-201ENST00000397537 GNG12Q9UBI6 72 aa6.13□□□□□ -1.43
SMCO1-201ENST00000397537 KLHDC2Q9Y2U9 406 aa6.13□□□□□ -1.43
SMCO1-201ENST00000397537 PDS5AQ29RF7 1337 aaKnown RBP6.12□□□□□ -1.43
SMCO1-201ENST00000397537 ADGRA2Q96PE1 1338 aa6.12□□□□□ -1.43
SMCO1-201ENST00000397537 A0A1W2PQ72 361 aa6.12□□□□□ -1.43
SMCO1-201ENST00000397537 FABP12A6NFH5 140 aa6.12□□□□□ -1.43
SMCO1-201ENST00000397537 MGAT4DA6NG13 374 aa6.12□□□□□ -1.43
SMCO1-201ENST00000397537 FRG2CA6NGY1 282 aa6.12□□□□□ -1.43
SMCO1-201ENST00000397537 ARGFXA6NJG6 315 aa6.12□□□□□ -1.43
SMCO1-201ENST00000397537 ARHGEF33A8MVX0 844 aa6.12□□□□□ -1.43
SMCO1-201ENST00000397537 E5RGE8 158 aa6.12□□□□□ -1.43
SMCO1-201ENST00000397537 CCL24O00175 119 aa6.12□□□□□ -1.43
SMCO1-201ENST00000397537 BET1O15155 118 aa6.12□□□□□ -1.43
SMCO1-201ENST00000397537 LDB2O43679 373 aa6.12□□□□□ -1.43
SMCO1-201ENST00000397537 NSA2O95478 260 aaKnown RBP6.12□□□□□ -1.43
SMCO1-201ENST00000397537 MMP3P08254 477 aa6.12□□□□□ -1.43
SMCO1-201ENST00000397537 SPATA31C1P0DKV0 1188 aa6.12□□□□□ -1.43
SMCO1-201ENST00000397537 CBSLP0DN79 551 aa6.12□□□□□ -1.43
SMCO1-201ENST00000397537 ZNF23P17027 643 aa6.12□□□□□ -1.43
SMCO1-201ENST00000397537 CBSP35520 551 aa6.12□□□□□ -1.43
SMCO1-201ENST00000397537 GLIPR1P48060 266 aa6.12□□□□□ -1.43
SMCO1-201ENST00000397537 CSNK1DP48730 415 aa6.12□□□□□ -1.43
SMCO1-201ENST00000397537 MAZP56270 477 aaKnown RBP6.12□□□□□ -1.43
SMCO1-201ENST00000397537 HERVK_113P63132 956 aa6.12□□□□□ -1.43
SMCO1-201ENST00000397537 ZNF415Q09FC8 603 aa6.12□□□□□ -1.43
SMCO1-201ENST00000397537 TEDDM1Q5T9Z0 273 aa6.12□□□□□ -1.43
SMCO1-201ENST00000397537 ZNF691Q5VV52 312 aa6.12□□□□□ -1.43
SMCO1-201ENST00000397537 LAIR1Q6GTX8 287 aa6.12□□□□□ -1.43
SMCO1-201ENST00000397537 PRR5LQ6MZQ0 368 aa6.12□□□□□ -1.43
SMCO1-201ENST00000397537 DUS1LQ6P1R4 473 aaKnown RBP6.12□□□□□ -1.43
SMCO1-201ENST00000397537 FUT10Q6P4F1 479 aa6.12□□□□□ -1.43
SMCO1-201ENST00000397537 RFWD3Q6PCD5 774 aa6.12□□□□□ -1.43
SMCO1-201ENST00000397537 C19orf35Q6ZS72 473 aa6.12□□□□□ -1.43
SMCO1-201ENST00000397537 PID1Q7Z2X4 250 aa6.12□□□□□ -1.43
SMCO1-201ENST00000397537 SLC26A11Q86WA9 606 aa6.12□□□□□ -1.43
SMCO1-201ENST00000397537 CACUL1Q86Y37 369 aa6.12□□□□□ -1.43
SMCO1-201ENST00000397537 MB21D2Q8IYB1 491 aaPredicted RBP6.12□□□□□ -1.43
SMCO1-201ENST00000397537 OR4K1Q8NGD4 311 aa6.12□□□□□ -1.43
SMCO1-201ENST00000397537 OR6M1Q8NGM8 313 aa6.12□□□□□ -1.43
SMCO1-201ENST00000397537 HSD17B8Q92506 261 aa6.12□□□□□ -1.43
SMCO1-201ENST00000397537 ZNF333Q96JL9 665 aa6.12□□□□□ -1.43
SMCO1-201ENST00000397537 MED10Q9BTT4 135 aa6.12□□□□□ -1.43
SMCO1-201ENST00000397537 TIPINQ9BVW5 301 aa6.12□□□□□ -1.43
SMCO1-201ENST00000397537 ERVK-6Q9BXR3 956 aa6.12□□□□□ -1.43
SMCO1-201ENST00000397537 OR2B2Q9GZK3 357 aa6.12□□□□□ -1.43
SMCO1-201ENST00000397537 C10orf88Q9H8K7 445 aa6.12□□□□□ -1.43
SMCO1-201ENST00000397537 TRIM45Q9H8W5 580 aaPredicted RBP6.12□□□□□ -1.43
SMCO1-201ENST00000397537 SP140LQ9H930 580 aa6.12□□□□□ -1.43
SMCO1-201ENST00000397537 UGT1A10Q9HAW8 530 aa6.12□□□□□ -1.43
SMCO1-201ENST00000397537 IMP3Q9NV31 184 aaKnown RBP6.12□□□□□ -1.43
SMCO1-201ENST00000397537 MRM2Q9UI43 246 aaKnown RBP6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms