RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 MGAT4BQ9UQ53 548 aa17.47■□□□□ 0.39
TSPAN4-204ENST00000397404 LRCH1Q9Y2L9 728 aa17.47■□□□□ 0.39
TSPAN4-204ENST00000397404 U3KQV3 271 aa17.47■□□□□ 0.39
TSPAN4-204ENST00000397404 WDFY3Q8IZQ1 3526 aa17.47■□□□□ 0.39
TSPAN4-204ENST00000397404 CDC14CA4D256 554 aa17.46■□□□□ 0.39
TSPAN4-204ENST00000397404 PDLIM1O00151 329 aa17.46■□□□□ 0.39
TSPAN4-204ENST00000397404 FADS1O60427 444 aa17.46■□□□□ 0.39
TSPAN4-204ENST00000397404 ICOSLGO75144 302 aa17.46■□□□□ 0.39
TSPAN4-204ENST00000397404 UGT2B11O75310 529 aa17.46■□□□□ 0.39
TSPAN4-204ENST00000397404 ADAP00813 363 aa17.46■□□□□ 0.39
TSPAN4-204ENST00000397404 F8A1P23610 371 aa17.46■□□□□ 0.39
TSPAN4-204ENST00000397404 ELAVL4P26378 380 aaKnown RBP17.46■□□□□ 0.39
TSPAN4-204ENST00000397404 MLF1P58340 268 aa17.46■□□□□ 0.39
TSPAN4-204ENST00000397404 C17orf67Q0P5P2 114 aa17.46■□□□□ 0.39
TSPAN4-204ENST00000397404 COX10Q12887 443 aa17.46■□□□□ 0.39
TSPAN4-204ENST00000397404 TTC23Q5W5X9 447 aa17.46■□□□□ 0.39
TSPAN4-204ENST00000397404 RRM2BQ7LG56 351 aa17.46■□□□□ 0.39
TSPAN4-204ENST00000397404 GALNT4Q8N4A0 578 aa17.46■□□□□ 0.39
TSPAN4-204ENST00000397404 POGLUT1Q8NBL1 392 aa17.46■□□□□ 0.39
TSPAN4-204ENST00000397404 PHOSPHO1Q8TCT1 267 aa17.46■□□□□ 0.39
TSPAN4-204ENST00000397404 DTNBP1Q96EV8 351 aa17.46■□□□□ 0.39
TSPAN4-204ENST00000397404 ATP13A2Q9NQ11 1180 aa17.46■□□□□ 0.39
TSPAN4-204ENST00000397404 ABI3Q9P2A4 366 aa17.46■□□□□ 0.39
TSPAN4-204ENST00000397404 POFUT2Q9Y2G5 429 aa17.46■□□□□ 0.39
TSPAN4-204ENST00000397404 PCDHGB6Q9Y5F9 930 aa17.46■□□□□ 0.39
TSPAN4-204ENST00000397404 NPIPA5A0A0B4J1W7 369 aa17.45■□□□□ 0.38
TSPAN4-204ENST00000397404 CENPVL1A0A0U1RR11 272 aa17.45■□□□□ 0.38
TSPAN4-204ENST00000397404 NPIPA7E9PJI5 369 aa17.45■□□□□ 0.38
TSPAN4-204ENST00000397404 WWP2O00308 870 aa17.45■□□□□ 0.38
TSPAN4-204ENST00000397404 DENRO43583 198 aaKnown RBP17.45■□□□□ 0.38
TSPAN4-204ENST00000397404 ITGA10O75578 1167 aa17.45■□□□□ 0.38
TSPAN4-204ENST00000397404 OR2J2O76002 312 aa17.45■□□□□ 0.38
TSPAN4-204ENST00000397404 NPIPA8P0DM63 369 aa17.45■□□□□ 0.38
TSPAN4-204ENST00000397404 RBM34P42696 430 aaKnown RBP17.45■□□□□ 0.38
TSPAN4-204ENST00000397404 PIN1Q13526 163 aaPredicted RBP17.45■□□□□ 0.38
TSPAN4-204ENST00000397404 GANABQ14697 944 aaKnown RBP17.45■□□□□ 0.38
TSPAN4-204ENST00000397404 MEP1AQ16819 746 aa17.45■□□□□ 0.38
TSPAN4-204ENST00000397404 EXOC3L2Q2M3D2 409 aa17.45■□□□□ 0.38
TSPAN4-204ENST00000397404 TBC1D25Q3MII6 688 aa17.45■□□□□ 0.38
TSPAN4-204ENST00000397404 FGD3Q5JSP0 725 aa17.45■□□□□ 0.38
TSPAN4-204ENST00000397404 ULK3Q6PHR2 472 aa17.45■□□□□ 0.38
TSPAN4-204ENST00000397404 COMTD1Q86VU5 262 aa17.45■□□□□ 0.38
TSPAN4-204ENST00000397404 RBM45Q8IUH3 476 aaKnown RBP17.45■□□□□ 0.38
TSPAN4-204ENST00000397404 ATG16L2Q8NAA4 619 aa17.45■□□□□ 0.38
TSPAN4-204ENST00000397404 CLEC1AQ8NC01 280 aa17.45■□□□□ 0.38
TSPAN4-204ENST00000397404 OR10G2Q8NGC3 310 aa17.45■□□□□ 0.38
TSPAN4-204ENST00000397404 ACOT11Q8WXI4 607 aaPredicted RBP17.45■□□□□ 0.38
TSPAN4-204ENST00000397404 HGDQ93099 445 aa17.45■□□□□ 0.38
TSPAN4-204ENST00000397404 SLC41A3Q96GZ6 507 aa17.45■□□□□ 0.38
TSPAN4-204ENST00000397404 LMF1Q96S06 567 aa17.45■□□□□ 0.38
TSPAN4-204ENST00000397404 DGCR6LQ9BY27 220 aa17.45■□□□□ 0.38
TSPAN4-204ENST00000397404 RPS6KB2Q9UBS0 482 aa17.45■□□□□ 0.38
TSPAN4-204ENST00000397404 J3KTA2 159 aa17.44■□□□□ 0.38
TSPAN4-204ENST00000397404 CHP2O43745 196 aa17.44■□□□□ 0.38
TSPAN4-204ENST00000397404 SEMA7AO75326 666 aa17.44■□□□□ 0.38
TSPAN4-204ENST00000397404 LINGO3P0C6S8 592 aa17.44■□□□□ 0.38
TSPAN4-204ENST00000397404 UBTFL6P0CB48 400 aaPredicted RBP17.44■□□□□ 0.38
TSPAN4-204ENST00000397404 GSTM3P21266 225 aa17.44■□□□□ 0.38
TSPAN4-204ENST00000397404 IGFBP5P24593 272 aa17.44■□□□□ 0.38
TSPAN4-204ENST00000397404 YAP1P46937 504 aaKnown RBP17.44■□□□□ 0.38
TSPAN4-204ENST00000397404 SOX8P57073 446 aa17.44■□□□□ 0.38
TSPAN4-204ENST00000397404 SKP2Q13309 424 aa17.44■□□□□ 0.38
TSPAN4-204ENST00000397404 IL10RAQ13651 578 aa17.44■□□□□ 0.38
TSPAN4-204ENST00000397404 TAF11Q15544 211 aa17.44■□□□□ 0.38
TSPAN4-204ENST00000397404 OR1Q1Q15612 314 aa17.44■□□□□ 0.38
TSPAN4-204ENST00000397404 DCAF10Q5QP82 559 aa17.44■□□□□ 0.38
TSPAN4-204ENST00000397404 PRR22Q8IZ63 422 aa17.44■□□□□ 0.38
TSPAN4-204ENST00000397404 PARP8Q8N3A8 854 aa17.44■□□□□ 0.38
TSPAN4-204ENST00000397404 SLC7A13Q8TCU3 470 aa17.44■□□□□ 0.38
TSPAN4-204ENST00000397404 ASB15Q8WXK1 588 aa17.44■□□□□ 0.38
TSPAN4-204ENST00000397404 CNOT9Q92600 299 aaKnown RBP17.44■□□□□ 0.38
TSPAN4-204ENST00000397404 FUZQ9BT04 418 aa17.44■□□□□ 0.38
TSPAN4-204ENST00000397404 ZBTB20Q9HC78 741 aaPredicted RBP17.44■□□□□ 0.38
TSPAN4-204ENST00000397404 CPNE5Q9HCH3 593 aa17.44■□□□□ 0.38
TSPAN4-204ENST00000397404 VNN3Q9NY84 501 aa17.44■□□□□ 0.38
TSPAN4-204ENST00000397404 DMXL1Q9Y485 3027 aa17.44■□□□□ 0.38
TSPAN4-204ENST00000397404 SH3PXD2BA1X283 911 aa17.44■□□□□ 0.38
TSPAN4-204ENST00000397404 ANKRD33BA6NCL7 494 aa17.44■□□□□ 0.38
TSPAN4-204ENST00000397404 CLDN24A6NM45 220 aa17.44■□□□□ 0.38
TSPAN4-204ENST00000397404 ANGPTL1O95841 491 aa17.44■□□□□ 0.38
TSPAN4-204ENST00000397404 IGF2P01344 180 aa17.44■□□□□ 0.38
TSPAN4-204ENST00000397404 PNMTP11086 282 aa17.44■□□□□ 0.38
TSPAN4-204ENST00000397404 PGCP20142 388 aa17.44■□□□□ 0.38
TSPAN4-204ENST00000397404 ACAA2P42765 397 aaKnown RBP17.44■□□□□ 0.38
TSPAN4-204ENST00000397404 IST1P53990 364 aa17.44■□□□□ 0.38
TSPAN4-204ENST00000397404 MERTKQ12866 999 aa17.44■□□□□ 0.38
TSPAN4-204ENST00000397404 MED21Q13503 144 aa17.44■□□□□ 0.38
TSPAN4-204ENST00000397404 CBFBQ13951 182 aa17.44■□□□□ 0.38
TSPAN4-204ENST00000397404 ZNF791Q3KP31 576 aaPredicted RBP17.44■□□□□ 0.38
TSPAN4-204ENST00000397404 NHSL2Q5HYW2 709 aa17.44■□□□□ 0.38
TSPAN4-204ENST00000397404 FAM69BQ5VUD6 431 aa17.44■□□□□ 0.38
TSPAN4-204ENST00000397404 WBP2NLQ6ICG8 309 aa17.44■□□□□ 0.38
TSPAN4-204ENST00000397404 SLC30A6Q6NXT4 461 aa17.44■□□□□ 0.38
TSPAN4-204ENST00000397404 LYPD8Q6UX82 237 aa17.44■□□□□ 0.38
TSPAN4-204ENST00000397404 CD300LDQ6UXZ3 194 aa17.44■□□□□ 0.38
TSPAN4-204ENST00000397404 TMEM179BQ7Z7N9 219 aa17.44■□□□□ 0.38
TSPAN4-204ENST00000397404 DHRSXQ8N5I4 330 aa17.44■□□□□ 0.38
TSPAN4-204ENST00000397404 THAP3Q8WTV1 239 aaPredicted RBP17.44■□□□□ 0.38
TSPAN4-204ENST00000397404 ARSGQ96EG1 525 aa17.44■□□□□ 0.38
TSPAN4-204ENST00000397404 MESP1Q9BRJ9 268 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms