RNA–Protein interactions for RNA: ENST00000397053.6

UPF2-203, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UPF2, Length 5,369 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-203ENST00000397053 CT45A3Q8NHU0 189 aa6.77□□□□□ -1.32
UPF2-203ENST00000397053 DDX1Q92499 740 aaKnown RBP6.77□□□□□ -1.32
UPF2-203ENST00000397053 ZMYND19Q96E35 227 aaPredicted RBP6.77□□□□□ -1.32
UPF2-203ENST00000397053 UBL7Q96S82 380 aaPredicted RBP6.77□□□□□ -1.32
UPF2-203ENST00000397053 PFDN5Q99471 154 aa6.77□□□□□ -1.32
UPF2-203ENST00000397053 DPH1Q9BZG8 443 aa6.77□□□□□ -1.32
UPF2-203ENST00000397053 RPH3ALQ9UNE2 315 aa6.77□□□□□ -1.32
UPF2-203ENST00000397053 NOSIPQ9Y314 301 aaKnown RBP6.77□□□□□ -1.32
UPF2-203ENST00000397053 SLC22A7Q9Y694 548 aa6.77□□□□□ -1.32
UPF2-203ENST00000397053 MYADML2A6NDP7 307 aa6.77□□□□□ -1.33
UPF2-203ENST00000397053 LDB3O75112 727 aa6.77□□□□□ -1.33
UPF2-203ENST00000397053 YIF1AO95070 293 aa6.77□□□□□ -1.33
UPF2-203ENST00000397053 IL4RP24394 825 aa6.77□□□□□ -1.33
UPF2-203ENST00000397053 HOXC13P31276 330 aa6.77□□□□□ -1.33
UPF2-203ENST00000397053 MAP2K3P46734 347 aa6.77□□□□□ -1.33
UPF2-203ENST00000397053 EDDM3BP56851 147 aa6.77□□□□□ -1.33
UPF2-203ENST00000397053 ZNF585AQ6P3V2 769 aa6.77□□□□□ -1.33
UPF2-203ENST00000397053 SCCPDHQ8NBX0 429 aa6.77□□□□□ -1.33
UPF2-203ENST00000397053 DMBX1Q8NFW5 382 aa6.77□□□□□ -1.33
UPF2-203ENST00000397053 OR52E1Q8NGJ3 308 aa6.77□□□□□ -1.33
UPF2-203ENST00000397053 TCEAL4Q96EI5 215 aa6.77□□□□□ -1.33
UPF2-203ENST00000397053 PGAP3Q96FM1 320 aaPredicted RBP6.77□□□□□ -1.33
UPF2-203ENST00000397053 FBXL20Q96IG2 436 aa6.77□□□□□ -1.33
UPF2-203ENST00000397053 SAMD8Q96LT4 415 aa6.77□□□□□ -1.33
UPF2-203ENST00000397053 PINK1Q9BXM7 581 aa6.77□□□□□ -1.33
UPF2-203ENST00000397053 THSD1Q9NS62 852 aa6.77□□□□□ -1.33
UPF2-203ENST00000397053 FGF21Q9NSA1 209 aa6.77□□□□□ -1.33
UPF2-203ENST00000397053 RIMS3Q9UJD0 308 aa6.77□□□□□ -1.33
UPF2-203ENST00000397053 TRAPPC2LQ9UL33 140 aa6.77□□□□□ -1.33
UPF2-203ENST00000397053 MRPS2Q9Y399 296 aaKnown RBP6.77□□□□□ -1.33
UPF2-203ENST00000397053 FAM96BQ9Y3D0 163 aa6.77□□□□□ -1.33
UPF2-203ENST00000397053 CHD1O14646 1710 aa6.77□□□□□ -1.33
UPF2-203ENST00000397053 SPHKAPQ2M3C7 1700 aa6.77□□□□□ -1.33
UPF2-203ENST00000397053 MKRN2OSH3BPM6 223 aa6.77□□□□□ -1.33
UPF2-203ENST00000397053 GPR171O14626 319 aa6.77□□□□□ -1.33
UPF2-203ENST00000397053 SCAMP2O15127 329 aaKnown RBP6.77□□□□□ -1.33
UPF2-203ENST00000397053 RGS9O75916 674 aaPredicted RBP6.77□□□□□ -1.33
UPF2-203ENST00000397053 CNIH1O95406 144 aa6.77□□□□□ -1.33
UPF2-203ENST00000397053 DEFA4P12838 97 aa6.77□□□□□ -1.33
UPF2-203ENST00000397053 NPBWR1P48145 328 aa6.77□□□□□ -1.33
UPF2-203ENST00000397053 DCAF7P61962 342 aa6.77□□□□□ -1.33
UPF2-203ENST00000397053 GNB2P62879 340 aa6.77□□□□□ -1.33
UPF2-203ENST00000397053 DCDP81605 110 aaKnown RBP6.77□□□□□ -1.33
UPF2-203ENST00000397053 FXNQ16595 210 aa6.77□□□□□ -1.33
UPF2-203ENST00000397053 AGAP7PQ5VUJ5 663 aa6.77□□□□□ -1.33
UPF2-203ENST00000397053 AGAP6Q5VW22 663 aa6.77□□□□□ -1.33
UPF2-203ENST00000397053 SFRP4Q6FHJ7 346 aaPredicted RBP6.77□□□□□ -1.33
UPF2-203ENST00000397053 MAMDC4Q6UXC1 1216 aa6.77□□□□□ -1.33
UPF2-203ENST00000397053 HAVCR2Q8TDQ0 301 aa6.77□□□□□ -1.33
UPF2-203ENST00000397053 ZNF566Q969W8 418 aa6.77□□□□□ -1.33
UPF2-203ENST00000397053 AGAP4Q96P64 663 aa6.77□□□□□ -1.33
UPF2-203ENST00000397053 ZNF317Q96PQ6 595 aaPredicted RBP6.77□□□□□ -1.33
UPF2-203ENST00000397053 INTS14Q96SY0 518 aa6.77□□□□□ -1.33
UPF2-203ENST00000397053 WDR83Q9BRX9 315 aaKnown RBP6.77□□□□□ -1.33
UPF2-203ENST00000397053 CALHM2Q9HA72 323 aa6.77□□□□□ -1.33
UPF2-203ENST00000397053 HHLA2Q9UM44 414 aa6.77□□□□□ -1.33
UPF2-203ENST00000397053 A8MVM7 634 aa6.77□□□□□ -1.33
UPF2-203ENST00000397053 G3V3Y1 287 aa6.77□□□□□ -1.33
UPF2-203ENST00000397053 SRPX2O60687 465 aaPredicted RBP6.77□□□□□ -1.33
UPF2-203ENST00000397053 GAAP10253 952 aa6.77□□□□□ -1.33
UPF2-203ENST00000397053 CYBAP13498 195 aa6.77□□□□□ -1.33
UPF2-203ENST00000397053 AQP2P41181 271 aa6.77□□□□□ -1.33
UPF2-203ENST00000397053 SLC1A3P43003 542 aa6.77□□□□□ -1.33
UPF2-203ENST00000397053 MAGEA6P43360 314 aa6.77□□□□□ -1.33
UPF2-203ENST00000397053 ATP4BP51164 291 aa6.77□□□□□ -1.33
UPF2-203ENST00000397053 SLC18A1P54219 525 aa6.77□□□□□ -1.33
UPF2-203ENST00000397053 SCAPQ12770 1279 aa6.77□□□□□ -1.33
UPF2-203ENST00000397053 DCAF12L1Q5VU92 463 aa6.77□□□□□ -1.33
UPF2-203ENST00000397053 KIAA1211LQ6NV74 962 aa6.77□□□□□ -1.33
UPF2-203ENST00000397053 TMEM150AQ86TG1 271 aa6.77□□□□□ -1.33
UPF2-203ENST00000397053 CLECL1Q8IZS7 167 aa6.77□□□□□ -1.33
UPF2-203ENST00000397053 ACOT4Q8N9L9 421 aa6.77□□□□□ -1.33
UPF2-203ENST00000397053 FAM174AQ8TBP5 190 aa6.77□□□□□ -1.33
UPF2-203ENST00000397053 ZDHHC16Q969W1 377 aa6.77□□□□□ -1.33
UPF2-203ENST00000397053 NXPE3Q969Y0 559 aa6.77□□□□□ -1.33
UPF2-203ENST00000397053 VN1R3Q9BXE9 311 aa6.77□□□□□ -1.33
UPF2-203ENST00000397053 FAM234AQ9H0X4 552 aa6.77□□□□□ -1.33
UPF2-203ENST00000397053 MMP27Q9H306 513 aa6.77□□□□□ -1.33
UPF2-203ENST00000397053 UBQLN4Q9NRR5 601 aa6.77□□□□□ -1.33
UPF2-203ENST00000397053 TAAR2Q9P1P5 351 aa6.77□□□□□ -1.33
UPF2-203ENST00000397053 MARCH4Q9P2E8 410 aaPredicted RBP6.77□□□□□ -1.33
UPF2-203ENST00000397053 PRSS38A1L453 326 aa6.77□□□□□ -1.33
UPF2-203ENST00000397053 KCNK5O95279 499 aa6.77□□□□□ -1.33
UPF2-203ENST00000397053 CLIC3O95833 236 aa6.77□□□□□ -1.33
UPF2-203ENST00000397053 DDAH2O95865 285 aa6.77□□□□□ -1.33
UPF2-203ENST00000397053 LAMP1P11279 417 aa6.77□□□□□ -1.33
UPF2-203ENST00000397053 PRPH2P23942 346 aa6.77□□□□□ -1.33
UPF2-203ENST00000397053 PTPN6P29350 595 aa6.77□□□□□ -1.33
UPF2-203ENST00000397053 SLC14A1Q13336 389 aa6.77□□□□□ -1.33
UPF2-203ENST00000397053 NFATC4Q14934 902 aa6.77□□□□□ -1.33
UPF2-203ENST00000397053 VWA2Q5GFL6 755 aa6.77□□□□□ -1.33
UPF2-203ENST00000397053 RAB41Q5JT25 222 aa6.77□□□□□ -1.33
UPF2-203ENST00000397053 HES5Q5TA89 166 aa6.77□□□□□ -1.33
UPF2-203ENST00000397053 STEAP4Q687X5 459 aa6.77□□□□□ -1.33
UPF2-203ENST00000397053 RBMXL3Q8N7X1 1067 aaKnown RBP6.77□□□□□ -1.33
UPF2-203ENST00000397053 OR52B6Q8NGF0 335 aa6.77□□□□□ -1.33
UPF2-203ENST00000397053 ZNF417Q8TAU3 575 aa6.77□□□□□ -1.33
UPF2-203ENST00000397053 FNDC9Q8TBE3 224 aa6.77□□□□□ -1.33
UPF2-203ENST00000397053 MCOLN1Q9GZU1 580 aa6.77□□□□□ -1.33
UPF2-203ENST00000397053 ACOT13Q9NPJ3 140 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms