RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 OXSR1O95747 527 aaPredicted RBP7.42□□□□□ -1.22
SCFD1-202ENST00000396629 RPS17P08708 135 aaKnown RBP7.42□□□□□ -1.22
SCFD1-202ENST00000396629 IFI6P09912 130 aa7.42□□□□□ -1.22
SCFD1-202ENST00000396629 LINGO3P0C6S8 592 aa7.42□□□□□ -1.22
SCFD1-202ENST00000396629 EDNRAP25101 427 aa7.42□□□□□ -1.22
SCFD1-202ENST00000396629 CD40P25942 277 aa7.42□□□□□ -1.22
SCFD1-202ENST00000396629 ELK4P28324 431 aa7.42□□□□□ -1.22
SCFD1-202ENST00000396629 GABRA3P34903 492 aa7.42□□□□□ -1.22
SCFD1-202ENST00000396629 SFTPDP35247 375 aa7.42□□□□□ -1.22
SCFD1-202ENST00000396629 MAP3K8P41279 467 aa7.42□□□□□ -1.22
SCFD1-202ENST00000396629 RFX3P48380 749 aa7.42□□□□□ -1.22
SCFD1-202ENST00000396629 CHRNB3Q05901 458 aa7.42□□□□□ -1.22
SCFD1-202ENST00000396629 GLE1Q53GS7 698 aaKnown RBP7.42□□□□□ -1.22
SCFD1-202ENST00000396629 ARL13AQ5H913 290 aaPredicted RBP7.42□□□□□ -1.22
SCFD1-202ENST00000396629 FAM219BQ5XKK7 198 aa7.42□□□□□ -1.22
SCFD1-202ENST00000396629 TMEM107Q6UX40 140 aa7.42□□□□□ -1.22
SCFD1-202ENST00000396629 GAS2L3Q86XJ1 694 aa7.42□□□□□ -1.22
SCFD1-202ENST00000396629 OR4C3Q8NH37 302 aa7.42□□□□□ -1.22
SCFD1-202ENST00000396629 OR2W6PQ8NHA6 318 aa7.42□□□□□ -1.22
SCFD1-202ENST00000396629 FAM110BQ8TC76 370 aa7.42□□□□□ -1.22
SCFD1-202ENST00000396629 HOXB13Q92826 284 aaPredicted RBP7.42□□□□□ -1.22
SCFD1-202ENST00000396629 PSD2Q9BQI7 771 aa7.42□□□□□ -1.22
SCFD1-202ENST00000396629 CXorf36Q9H7Y0 433 aa7.42□□□□□ -1.22
SCFD1-202ENST00000396629 COQ10BQ9H8M1 238 aa7.42□□□□□ -1.22
SCFD1-202ENST00000396629 DMGDHQ9UI17 866 aaKnown RBP7.42□□□□□ -1.22
SCFD1-202ENST00000396629 ZNF225Q9UK10 706 aa7.42□□□□□ -1.22
SCFD1-202ENST00000396629 POU2F3Q9UKI9 436 aa7.42□□□□□ -1.22
SCFD1-202ENST00000396629 NFU1Q9UMS0 254 aa7.42□□□□□ -1.22
SCFD1-202ENST00000396629 SLC25A15Q9Y619 301 aa7.42□□□□□ -1.22
SCFD1-202ENST00000396629 PMF1-BGLAPU3KQ54 211 aa7.42□□□□□ -1.22
SCFD1-202ENST00000396629 A0A096LPK6 155 aa7.42□□□□□ -1.22
SCFD1-202ENST00000396629 A0A0A6YYJ9 748 aa7.42□□□□□ -1.22
SCFD1-202ENST00000396629 SLCO1B7G3V0H7 640 aa7.42□□□□□ -1.22
SCFD1-202ENST00000396629 PPP6CO00743 305 aa7.42□□□□□ -1.22
SCFD1-202ENST00000396629 OTCP00480 354 aa7.42□□□□□ -1.22
SCFD1-202ENST00000396629 JUNP05412 331 aaKnown RBP7.42□□□□□ -1.22
SCFD1-202ENST00000396629 BMP4P12644 408 aa7.42□□□□□ -1.22
SCFD1-202ENST00000396629 CHN1P15882 459 aa7.42□□□□□ -1.22
SCFD1-202ENST00000396629 ZNF23P17027 643 aa7.42□□□□□ -1.22
SCFD1-202ENST00000396629 EIF1P41567 113 aaKnown RBP7.42□□□□□ -1.22
SCFD1-202ENST00000396629 GSTM5P46439 218 aa7.42□□□□□ -1.22
SCFD1-202ENST00000396629 NCBP2P52298 156 aaKnown RBP eCLIP7.42□□□□□ -1.226e-13■■□□□ 13
SCFD1-202ENST00000396629 SLC29A2Q14542 456 aa7.42□□□□□ -1.22
SCFD1-202ENST00000396629 TCHHL1Q5QJ38 904 aaPredicted RBP7.42□□□□□ -1.22
SCFD1-202ENST00000396629 KLHL17Q6TDP4 642 aa7.42□□□□□ -1.22
SCFD1-202ENST00000396629 RPS27LQ71UM5 84 aaKnown RBP7.42□□□□□ -1.22
SCFD1-202ENST00000396629 LRRC8AQ8IWT6 810 aa7.42□□□□□ -1.22
SCFD1-202ENST00000396629 PLD6Q8N2A8 252 aaKnown RBP7.42□□□□□ -1.22
SCFD1-202ENST00000396629 SEMA6DQ8NFY4 1073 aa7.42□□□□□ -1.22
SCFD1-202ENST00000396629 ZNF483Q8TF39 744 aaPredicted RBP7.42□□□□□ -1.22
SCFD1-202ENST00000396629 PIK3R3Q92569 461 aa7.42□□□□□ -1.22
SCFD1-202ENST00000396629 ELP4Q96EB1 424 aa7.42□□□□□ -1.22
SCFD1-202ENST00000396629 SOX7Q9BT81 388 aa7.42□□□□□ -1.22
SCFD1-202ENST00000396629 GLIPR2Q9H4G4 154 aa7.42□□□□□ -1.22
SCFD1-202ENST00000396629 TAS2R7Q9NYW3 318 aa7.42□□□□□ -1.22
SCFD1-202ENST00000396629 KLHL9Q9P2J3 617 aa7.42□□□□□ -1.22
SCFD1-202ENST00000396629 GRID1Q9ULK0 1009 aa7.42□□□□□ -1.22
SCFD1-202ENST00000396629 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.42□□□□□ -1.22
SCFD1-202ENST00000396629 GNG14A0A1W2PPG7 69 aa7.41□□□□□ -1.22
SCFD1-202ENST00000396629 LOC390937A0A1W2PQ73 354 aa7.41□□□□□ -1.22
SCFD1-202ENST00000396629 ESYT3A0FGR9 886 aa7.41□□□□□ -1.22
SCFD1-202ENST00000396629 GJE1A6NN92 205 aa7.41□□□□□ -1.22
SCFD1-202ENST00000396629 ZNF724A8MTY0 619 aa7.41□□□□□ -1.22
SCFD1-202ENST00000396629 MANBAO00462 879 aa7.41□□□□□ -1.22
SCFD1-202ENST00000396629 ZNF195O14628 629 aa7.41□□□□□ -1.22
SCFD1-202ENST00000396629 NKX2-2O95096 273 aa7.41□□□□□ -1.22
SCFD1-202ENST00000396629 VENTXO95231 258 aa7.41□□□□□ -1.22
SCFD1-202ENST00000396629 RBP1P09455 135 aa7.41□□□□□ -1.22
SCFD1-202ENST00000396629 DDCP20711 480 aa7.41□□□□□ -1.22
SCFD1-202ENST00000396629 ENPP1P22413 925 aa7.41□□□□□ -1.22
SCFD1-202ENST00000396629 APOBEC3AP31941 199 aaPredicted RBP7.41□□□□□ -1.22
SCFD1-202ENST00000396629 ZNF83P51522 516 aa7.41□□□□□ -1.22
SCFD1-202ENST00000396629 FOXF1Q12946 379 aa7.41□□□□□ -1.22
SCFD1-202ENST00000396629 SWI5Q1ZZU3 235 aa7.41□□□□□ -1.22
SCFD1-202ENST00000396629 MST1LQ2TV78 715 aa7.41□□□□□ -1.22
SCFD1-202ENST00000396629 MROH9Q5TGP6 573 aa7.41□□□□□ -1.22
SCFD1-202ENST00000396629 GALNT18Q6P9A2 607 aa7.41□□□□□ -1.22
SCFD1-202ENST00000396629 MISPQ8IVT2 679 aa7.41□□□□□ -1.22
SCFD1-202ENST00000396629 GATSQ8NAP1 163 aa7.41□□□□□ -1.22
SCFD1-202ENST00000396629 B4GALNT2Q8NHY0 566 aa7.41□□□□□ -1.22
SCFD1-202ENST00000396629 FBF1Q8TES7 1133 aa7.41□□□□□ -1.22
SCFD1-202ENST00000396629 ZNF75CPQ92670 426 aaPredicted RBP7.41□□□□□ -1.22
SCFD1-202ENST00000396629 FOXN4Q96NZ1 517 aa7.41□□□□□ -1.22
SCFD1-202ENST00000396629 INPP5KQ9BT40 448 aa7.41□□□□□ -1.22
SCFD1-202ENST00000396629 C1QTNF3Q9BXJ4 246 aa7.41□□□□□ -1.22
SCFD1-202ENST00000396629 MYOZ1Q9NP98 299 aaPredicted RBP7.41□□□□□ -1.22
SCFD1-202ENST00000396629 DDX18Q9NVP1 670 aaKnown RBP7.41□□□□□ -1.22
SCFD1-202ENST00000396629 SIRT5Q9NXA8 310 aa7.41□□□□□ -1.22
SCFD1-202ENST00000396629 FKBP7Q9Y680 259 aa7.41□□□□□ -1.22
SCFD1-202ENST00000396629 A0A1W2PQD3 144 aa7.4□□□□□ -1.22
SCFD1-202ENST00000396629 CYTIPO60759 359 aa7.4□□□□□ -1.22
SCFD1-202ENST00000396629 SMIM24O75264 130 aa7.4□□□□□ -1.22
SCFD1-202ENST00000396629 OR4F21O95013 312 aa7.4□□□□□ -1.22
SCFD1-202ENST00000396629 TCP1P17987 556 aaKnown RBP7.4□□□□□ -1.22
SCFD1-202ENST00000396629 LCN1P31025 176 aa7.4□□□□□ -1.22
SCFD1-202ENST00000396629 TIA1P31483 386 aaKnown RBP eCLIP7.4□□□□□ -1.224e-8■■□□□ 11.9
SCFD1-202ENST00000396629 STX2P32856 288 aa7.4□□□□□ -1.22
SCFD1-202ENST00000396629 SRP14P37108 136 aaKnown RBP7.4□□□□□ -1.22
SCFD1-202ENST00000396629 PRIM2P49643 509 aa7.4□□□□□ -1.22
SCFD1-202ENST00000396629 RAC3P60763 192 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms