RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 ATG10Q9H0Y0 220 aa5□□□□□ -1.61
VPS41-203ENST00000395969 PPIL3Q9H2H8 161 aaKnown RBP5□□□□□ -1.61
VPS41-203ENST00000395969 PIGUQ9H490 435 aa5□□□□□ -1.61
VPS41-203ENST00000395969 ABCB9Q9NP78 766 aa5□□□□□ -1.61
VPS41-203ENST00000395969 MRPS30Q9NP92 439 aaKnown RBP5□□□□□ -1.61
VPS41-203ENST00000395969 PTTG3PQ9NZH4 202 aa5□□□□□ -1.61
VPS41-203ENST00000395969 CNOT2Q9NZN8 540 aaKnown RBP5□□□□□ -1.61
VPS41-203ENST00000395969 PLEKHB1Q9UF11 243 aaPredicted RBP5□□□□□ -1.61
VPS41-203ENST00000395969 TBC1D29Q9UFV1 150 aa5□□□□□ -1.61
VPS41-203ENST00000395969 NTNG1Q9Y2I2 539 aa5□□□□□ -1.61
VPS41-203ENST00000395969 LSM2Q9Y333 95 aaKnown RBP5□□□□□ -1.61
VPS41-203ENST00000395969 ARID1AO14497 2285 aa4.99□□□□□ -1.61
VPS41-203ENST00000395969 TBC1D3KA0A087X1G2 549 aa4.99□□□□□ -1.61
VPS41-203ENST00000395969 SH3D21A4FU49 640 aa4.99□□□□□ -1.61
VPS41-203ENST00000395969 TBC1D3FA6NER0 549 aaPredicted RBP4.99□□□□□ -1.61
VPS41-203ENST00000395969 FFAR3O14843 346 aa4.99□□□□□ -1.61
VPS41-203ENST00000395969 GPR42O15529 346 aa4.99□□□□□ -1.61
VPS41-203ENST00000395969 TMPRSS11DO60235 418 aa4.99□□□□□ -1.61
VPS41-203ENST00000395969 MPZL2O60487 215 aa4.99□□□□□ -1.61
VPS41-203ENST00000395969 B4GALT2O60909 372 aa4.99□□□□□ -1.61
VPS41-203ENST00000395969 NDUFS6O75380 124 aaKnown RBP4.99□□□□□ -1.61
VPS41-203ENST00000395969 PLATP00750 562 aa4.99□□□□□ -1.61
VPS41-203ENST00000395969 FHP07954 510 aa4.99□□□□□ -1.61
VPS41-203ENST00000395969 HSMCR30P0CW71 290 aa4.99□□□□□ -1.61
VPS41-203ENST00000395969 ANXA8P13928 327 aa4.99□□□□□ -1.61
VPS41-203ENST00000395969 HK1P19367 917 aa4.99□□□□□ -1.61
VPS41-203ENST00000395969 ZNF10P21506 573 aaPredicted RBP4.99□□□□□ -1.61
VPS41-203ENST00000395969 SDHBP21912 280 aa4.99□□□□□ -1.61
VPS41-203ENST00000395969 ALDH9A1P49189 494 aa4.99□□□□□ -1.61
VPS41-203ENST00000395969 MAP2K6P52564 334 aa4.99□□□□□ -1.61
VPS41-203ENST00000395969 SMIM11AP58511 58 aa4.99□□□□□ -1.61
VPS41-203ENST00000395969 SNRPGP62308 76 aaKnown RBP4.99□□□□□ -1.61
VPS41-203ENST00000395969 ARHGAP11BQ3KRB8 267 aa4.99□□□□□ -1.61
VPS41-203ENST00000395969 GTDC1Q4AE62 458 aa4.99□□□□□ -1.61
VPS41-203ENST00000395969 FLYWCH1Q4VC44 716 aa4.99□□□□□ -1.61
VPS41-203ENST00000395969 TBC1D3GQ6DHY5 549 aa4.99□□□□□ -1.61
VPS41-203ENST00000395969 REEP3Q6NUK4 255 aa4.99□□□□□ -1.61
VPS41-203ENST00000395969 MZT2BQ6NZ67 158 aa4.99□□□□□ -1.61
VPS41-203ENST00000395969 WDR74Q6RFH5 385 aaPredicted RBP4.99□□□□□ -1.61
VPS41-203ENST00000395969 DBX2Q6ZNG2 339 aa4.99□□□□□ -1.61
VPS41-203ENST00000395969 Q6ZPB1 254 aaPredicted RBP4.99□□□□□ -1.61
VPS41-203ENST00000395969 GLCCI1Q86VQ1 547 aa4.99□□□□□ -1.61
VPS41-203ENST00000395969 TAGAPQ8N103 731 aa4.99□□□□□ -1.61
VPS41-203ENST00000395969 ATG16L2Q8NAA4 619 aa4.99□□□□□ -1.61
VPS41-203ENST00000395969 CAMKVQ8NCB2 501 aa4.99□□□□□ -1.61
VPS41-203ENST00000395969 B3GNT7Q8NFL0 401 aa4.99□□□□□ -1.61
VPS41-203ENST00000395969 RBPMSQ93062 196 aaKnown RBP4.99□□□□□ -1.61
VPS41-203ENST00000395969 FAM120BQ96EK7 910 aaKnown RBP4.99□□□□□ -1.61
VPS41-203ENST00000395969 PANX1Q96RD7 426 aa4.99□□□□□ -1.61
VPS41-203ENST00000395969 CNPPD1Q9BV87 410 aa4.99□□□□□ -1.61
VPS41-203ENST00000395969 SPATA5L1Q9BVQ7 753 aa4.99□□□□□ -1.61
VPS41-203ENST00000395969 PINK1Q9BXM7 581 aa4.99□□□□□ -1.61
VPS41-203ENST00000395969 MS4A7Q9GZW8 240 aaPredicted RBP4.99□□□□□ -1.61
VPS41-203ENST00000395969 SYNDIG1Q9H7V2 258 aa4.99□□□□□ -1.61
VPS41-203ENST00000395969 SLC25A19Q9HC21 320 aa4.99□□□□□ -1.61
VPS41-203ENST00000395969 DUSP22Q9NRW4 184 aa4.99□□□□□ -1.61
VPS41-203ENST00000395969 SEMA3GQ9NS98 782 aa4.99□□□□□ -1.61
VPS41-203ENST00000395969 NDUFAF4Q9P032 175 aa4.99□□□□□ -1.61
VPS41-203ENST00000395969 NDRG2Q9UN36 371 aaKnown RBP4.99□□□□□ -1.61
VPS41-203ENST00000395969 STUB1Q9UNE7 303 aa4.99□□□□□ -1.61
VPS41-203ENST00000395969 ANGPT4Q9Y264 503 aa4.99□□□□□ -1.61
VPS41-203ENST00000395969 SAMHD1Q9Y3Z3 626 aaKnown RBP4.99□□□□□ -1.61
VPS41-203ENST00000395969 GOLGA4Q13439 2230 aaKnown RBP4.99□□□□□ -1.61
VPS41-203ENST00000395969 HEATR5BQ9P2D3 2071 aa4.99□□□□□ -1.61
VPS41-203ENST00000395969 HYKKA2RU49 373 aa4.99□□□□□ -1.61
VPS41-203ENST00000395969 SMIM30A4D0T7 59 aa4.99□□□□□ -1.61
VPS41-203ENST00000395969 FABP12A6NFH5 140 aa4.99□□□□□ -1.61
VPS41-203ENST00000395969 TUBAL3A6NHL2 446 aa4.99□□□□□ -1.61
VPS41-203ENST00000395969 ANKDD1BA6NHY2 528 aa4.99□□□□□ -1.61
VPS41-203ENST00000395969 FAM170BA6NMN3 283 aa4.99□□□□□ -1.61
VPS41-203ENST00000395969 HMGN4O00479 90 aa4.99□□□□□ -1.61
VPS41-203ENST00000395969 FABP7O15540 132 aa4.99□□□□□ -1.61
VPS41-203ENST00000395969 HRO43593 1189 aa4.99□□□□□ -1.61
VPS41-203ENST00000395969 FOXS1O43638 330 aa4.99□□□□□ -1.61
VPS41-203ENST00000395969 WDPCPO95876 746 aa4.99□□□□□ -1.61
VPS41-203ENST00000395969 IL1AP01583 271 aa4.99□□□□□ -1.61
VPS41-203ENST00000395969 RD3LP0DJH9 198 aa4.99□□□□□ -1.61
VPS41-203ENST00000395969 CAPZA2P47755 286 aa4.99□□□□□ -1.61
VPS41-203ENST00000395969 KHKP50053 298 aa4.99□□□□□ -1.61
VPS41-203ENST00000395969 NUDT6P53370 316 aa4.99□□□□□ -1.61
VPS41-203ENST00000395969 ZP2Q05996 745 aa4.99□□□□□ -1.61
VPS41-203ENST00000395969 COX10Q12887 443 aa4.99□□□□□ -1.61
VPS41-203ENST00000395969 FBXO48Q5FWF7 155 aa4.99□□□□□ -1.61
VPS41-203ENST00000395969 FAM209BQ5JX69 171 aa4.99□□□□□ -1.61
VPS41-203ENST00000395969 ENTPD8Q5MY95 495 aa4.99□□□□□ -1.61
VPS41-203ENST00000395969 CDC73Q6P1J9 531 aa4.99□□□□□ -1.61
VPS41-203ENST00000395969 TMEM107Q6UX40 140 aa4.99□□□□□ -1.61
VPS41-203ENST00000395969 HSDL2Q6YN16 418 aa4.99□□□□□ -1.61
VPS41-203ENST00000395969 ASPGQ86U10 573 aa4.99□□□□□ -1.61
VPS41-203ENST00000395969 RPLP0P6Q8NHW5 317 aa4.99□□□□□ -1.61
VPS41-203ENST00000395969 LIPHQ8WWY8 451 aa4.99□□□□□ -1.61
VPS41-203ENST00000395969 ST8SIA4Q92187 359 aa4.99□□□□□ -1.61
VPS41-203ENST00000395969 TCTN2Q96GX1 697 aa4.99□□□□□ -1.61
VPS41-203ENST00000395969 C12orf66Q96MD2 445 aa4.99□□□□□ -1.61
VPS41-203ENST00000395969 REG4Q9BYZ8 158 aa4.99□□□□□ -1.61
VPS41-203ENST00000395969 TMEM168Q9H0V1 697 aa4.99□□□□□ -1.61
VPS41-203ENST00000395969 RANBP3Q9H6Z4 567 aaPredicted RBP4.99□□□□□ -1.61
VPS41-203ENST00000395969 PPP1R3EQ9H7J1 279 aa4.99□□□□□ -1.61
VPS41-203ENST00000395969 ISYNA1Q9NPH2 558 aa4.99□□□□□ -1.61
VPS41-203ENST00000395969 MAN2C1Q9NTJ4 1040 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms